RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 AXIN2Q9Y2T1 843 aa10.34□□□□□ -0.75
HMGCR-211ENST00000512053 LMO7Q8WWI1 1683 aa10.34□□□□□ -0.75
HMGCR-211ENST00000512053 RREB1Q92766 1687 aa10.34□□□□□ -0.75
HMGCR-211ENST00000512053 SLC15A2Q16348 729 aa10.33□□□□□ -0.76
HMGCR-211ENST00000512053 ARHGEF25Q86VW2 580 aa10.33□□□□□ -0.76
HMGCR-211ENST00000512053 TOPAZ1Q8N9V7 1692 aa10.33□□□□□ -0.76
HMGCR-211ENST00000512053 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
HMGCR-211ENST00000512053 TTC21BQ7Z4L5 1316 aa10.33□□□□□ -0.76
HMGCR-211ENST00000512053 TTC21AQ8NDW8 1320 aa10.33□□□□□ -0.76
HMGCR-211ENST00000512053 CCDC7Q96M83 1385 aa10.32□□□□□ -0.76
HMGCR-211ENST00000512053 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
HMGCR-211ENST00000512053 MTFR1LQ9H019 292 aa10.32□□□□□ -0.76
HMGCR-211ENST00000512053 PCDHB13Q9Y5F0 798 aa10.32□□□□□ -0.76
HMGCR-211ENST00000512053 PARP4Q9UKK3 1724 aaKnown RBP10.32□□□□□ -0.76
HMGCR-211ENST00000512053 CPSF1Q10570 1443 aaKnown RBP10.32□□□□□ -0.76
HMGCR-211ENST00000512053 ST18O60284 1047 aa10.31□□□□□ -0.76
HMGCR-211ENST00000512053 NUBP1P53384 320 aa10.31□□□□□ -0.76
HMGCR-211ENST00000512053 SYT17Q9BSW7 474 aa10.31□□□□□ -0.76
HMGCR-211ENST00000512053 FHDC1Q9C0D6 1143 aaPredicted RBP10.31□□□□□ -0.76
HMGCR-211ENST00000512053 NLRP2Q9NX02 1062 aa10.31□□□□□ -0.76
HMGCR-211ENST00000512053 BCL9O00512 1426 aa10.31□□□□□ -0.76
HMGCR-211ENST00000512053 SRCAPQ6ZRS2 3230 aa10.31□□□□□ -0.76
HMGCR-211ENST00000512053 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
HMGCR-211ENST00000512053 SLIT3O75094 1523 aa10.3□□□□□ -0.76
HMGCR-211ENST00000512053 PTGER2P43116 358 aa10.3□□□□□ -0.76
HMGCR-211ENST00000512053 L3MBTL2Q969R5 705 aa10.3□□□□□ -0.76
HMGCR-211ENST00000512053 ACSBG1Q96GR2 724 aa10.3□□□□□ -0.76
HMGCR-211ENST00000512053 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
HMGCR-211ENST00000512053 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
HMGCR-211ENST00000512053 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
HMGCR-211ENST00000512053 IL2RBP14784 551 aa10.29□□□□□ -0.76
HMGCR-211ENST00000512053 IFNL1Q8IU54 200 aa10.29□□□□□ -0.76
HMGCR-211ENST00000512053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGCR-211ENST00000512053 ZNF784Q8NCA9 323 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-211ENST00000512053 ARXQ96QS3 562 aa10.29□□□□□ -0.76
HMGCR-211ENST00000512053 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
HMGCR-211ENST00000512053 LRRC37A3O60309 1634 aa10.28□□□□□ -0.76
HMGCR-211ENST00000512053 POLD1P28340 1107 aa10.27□□□□□ -0.77
HMGCR-211ENST00000512053 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
HMGCR-211ENST00000512053 GPR162Q16538 588 aa10.27□□□□□ -0.77
HMGCR-211ENST00000512053 HDGFL2Q7Z4V5 671 aaPredicted RBP10.27□□□□□ -0.77
HMGCR-211ENST00000512053 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
HMGCR-211ENST00000512053 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
HMGCR-211ENST00000512053 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
HMGCR-211ENST00000512053 PEAK1Q9H792 1746 aa10.26□□□□□ -0.77
HMGCR-211ENST00000512053 RGPD3A6NKT7 1758 aaPredicted RBP10.26□□□□□ -0.77
HMGCR-211ENST00000512053 RGPD4Q7Z3J3 1758 aa10.26□□□□□ -0.77
HMGCR-211ENST00000512053 IRX5P78411 483 aaPredicted RBP10.25□□□□□ -0.77
HMGCR-211ENST00000512053 DDX54Q8TDD1 881 aaKnown RBP10.25□□□□□ -0.77
HMGCR-211ENST00000512053 ANKRD24Q8TF21 1146 aa10.25□□□□□ -0.77
HMGCR-211ENST00000512053 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
HMGCR-211ENST00000512053 ERBB3P21860 1342 aa10.25□□□□□ -0.77
HMGCR-211ENST00000512053 QRICH2Q9H0J4 1663 aa10.25□□□□□ -0.77
HMGCR-211ENST00000512053 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
HMGCR-211ENST00000512053 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
HMGCR-211ENST00000512053 SYTL4Q96C24 671 aaPredicted RBP10.24□□□□□ -0.77
HMGCR-211ENST00000512053 TERF2IPQ9NYB0 399 aa10.24□□□□□ -0.77
HMGCR-211ENST00000512053 C1QTNF8P60827 252 aa10.23□□□□□ -0.77
HMGCR-211ENST00000512053 NME9Q86XW9 330 aa10.23□□□□□ -0.77
HMGCR-211ENST00000512053 SIN3AQ96ST3 1273 aa10.23□□□□□ -0.77
HMGCR-211ENST00000512053 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
HMGCR-211ENST00000512053 TFCP2L1Q9NZI6 479 aa10.23□□□□□ -0.77
HMGCR-211ENST00000512053 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
HMGCR-211ENST00000512053 PIK3C2AO00443 1686 aa10.22□□□□□ -0.77
HMGCR-211ENST00000512053 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-211ENST00000512053 CARD11Q9BXL7 1154 aa10.22□□□□□ -0.77
HMGCR-211ENST00000512053 USP31Q70CQ4 1352 aa10.22□□□□□ -0.77
HMGCR-211ENST00000512053 CASZ1Q86V15 1759 aa10.21□□□□□ -0.77
HMGCR-211ENST00000512053 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.77
HMGCR-211ENST00000512053 ZNF827Q17R98 1081 aa10.21□□□□□ -0.77
HMGCR-211ENST00000512053 ABCC6O95255 1503 aa10.21□□□□□ -0.78
HMGCR-211ENST00000512053 COL18A1P39060 1754 aa10.21□□□□□ -0.78
HMGCR-211ENST00000512053 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
HMGCR-211ENST00000512053 PLCG2P16885 1265 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 AMPHP49418 695 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 MYOM1P52179 1685 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 IP6K1Q92551 441 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 MAP3K5Q99683 1374 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 SLC12A5Q9H2X9 1139 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
HMGCR-211ENST00000512053 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
HMGCR-211ENST00000512053 NFAT5O94916 1531 aa10.19□□□□□ -0.78
HMGCR-211ENST00000512053 GRIN3BO60391 1043 aa10.19□□□□□ -0.78
HMGCR-211ENST00000512053 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
HMGCR-211ENST00000512053 COG3Q96JB2 828 aa10.19□□□□□ -0.78
HMGCR-211ENST00000512053 SBF2Q86WG5 1849 aa10.19□□□□□ -0.78
HMGCR-211ENST00000512053 EDC4Q6P2E9 1401 aaKnown RBP10.18□□□□□ -0.78
HMGCR-211ENST00000512053 SBNO2Q9Y2G9 1366 aa10.18□□□□□ -0.78
HMGCR-211ENST00000512053 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
HMGCR-211ENST00000512053 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
HMGCR-211ENST00000512053 ZCRB1Q8TBF4 217 aaKnown RBP10.18□□□□□ -0.78
HMGCR-211ENST00000512053 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
HMGCR-211ENST00000512053 PNPLA7Q6ZV29 1317 aa10.17□□□□□ -0.78
HMGCR-211ENST00000512053 SPNS2Q8IVW8 549 aa10.17□□□□□ -0.78
HMGCR-211ENST00000512053 CCNL1Q9UK58 526 aaPredicted RBP10.17□□□□□ -0.78
HMGCR-211ENST00000512053 NHSQ6T4R5 1651 aa10.16□□□□□ -0.78
HMGCR-211ENST00000512053 KCNQ4P56696 695 aa10.16□□□□□ -0.78
HMGCR-211ENST00000512053 TMEM121BQ9BXQ6 578 aaPredicted RBP10.16□□□□□ -0.78
HMGCR-211ENST00000512053 WNK3Q9BYP7 1800 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms