RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
PDGFC-207ENST00000511985 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
PDGFC-207ENST00000511985 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
PDGFC-207ENST00000511985 MEN1O00255 615 aa12.08□□□□□ -0.48
PDGFC-207ENST00000511985 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.48
PDGFC-207ENST00000511985 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
PDGFC-207ENST00000511985 A0A1W2PRU2 124 aa12.07□□□□□ -0.48
PDGFC-207ENST00000511985 LORP23490 312 aaPredicted RBP12.07□□□□□ -0.48
PDGFC-207ENST00000511985 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDGFC-207ENST00000511985 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
PDGFC-207ENST00000511985 TSGA10IPQ3SY00 556 aa12.06□□□□□ -0.48
PDGFC-207ENST00000511985 LYSMD3Q7Z3D4 306 aa12.06□□□□□ -0.48
PDGFC-207ENST00000511985 PRICKLE2Q7Z3G6 844 aa12.06□□□□□ -0.48
PDGFC-207ENST00000511985 GPR161Q8N6U8 529 aaKnown RBP12.06□□□□□ -0.48
PDGFC-207ENST00000511985 RNF144AP50876 292 aaPredicted RBP12.05□□□□□ -0.48
PDGFC-207ENST00000511985 STK17AQ9UEE5 414 aa12.05□□□□□ -0.48
PDGFC-207ENST00000511985 TRAK2O60296 914 aa12.04□□□□□ -0.48
PDGFC-207ENST00000511985 RHOQP17081 205 aa12.04□□□□□ -0.48
PDGFC-207ENST00000511985 CYP2U1Q7Z449 544 aa12.04□□□□□ -0.48
PDGFC-207ENST00000511985 PHTF2Q8N3S3 785 aa12.03□□□□□ -0.48
PDGFC-207ENST00000511985 ZSCAN1Q8NBB4 408 aa12.03□□□□□ -0.48
PDGFC-207ENST00000511985 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
PDGFC-207ENST00000511985 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
PDGFC-207ENST00000511985 RAB6BQ9NRW1 208 aa12.03□□□□□ -0.48
PDGFC-207ENST00000511985 ITGA6P23229 1130 aa12.02□□□□□ -0.49
PDGFC-207ENST00000511985 COG6Q9Y2V7 657 aa12.02□□□□□ -0.49
PDGFC-207ENST00000511985 CDC14CA4D256 554 aa12□□□□□ -0.49
PDGFC-207ENST00000511985 FLIIQ13045 1269 aa12□□□□□ -0.49
PDGFC-207ENST00000511985 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
PDGFC-207ENST00000511985 VWA5B2Q8N398 1253 aa12□□□□□ -0.49
PDGFC-207ENST00000511985 NANOS1Q8WY41 292 aaKnown RBP12□□□□□ -0.49
PDGFC-207ENST00000511985 NLRP3Q96P20 1036 aa12□□□□□ -0.49
PDGFC-207ENST00000511985 GPC1P35052 558 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 KRT76Q01546 638 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 CLN3Q13286 438 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 POM121Q96HA1 1249 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 DOLKQ9UPQ8 538 aa11.99□□□□□ -0.49
PDGFC-207ENST00000511985 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
PDGFC-207ENST00000511985 SLC27A3Q5K4L6 730 aa11.98□□□□□ -0.49
PDGFC-207ENST00000511985 GTF3C3Q9Y5Q9 886 aa11.98□□□□□ -0.49
PDGFC-207ENST00000511985 POU4F2Q12837 409 aa11.97□□□□□ -0.49
PDGFC-207ENST00000511985 CNTNAP3BQ96NU0 1288 aa11.97□□□□□ -0.49
PDGFC-207ENST00000511985 CNTNAP3Q9BZ76 1288 aa11.97□□□□□ -0.49
PDGFC-207ENST00000511985 CUEDC1Q9NWM3 386 aaPredicted RBP11.97□□□□□ -0.49
PDGFC-207ENST00000511985 GNRH1P01148 92 aa11.96□□□□□ -0.49
PDGFC-207ENST00000511985 IL2RAP01589 272 aa11.96□□□□□ -0.49
PDGFC-207ENST00000511985 COL25A1Q9BXS0 654 aaPredicted RBP11.96□□□□□ -0.49
PDGFC-207ENST00000511985 GRIP2Q9C0E4 1043 aa11.96□□□□□ -0.49
PDGFC-207ENST00000511985 STAU1O95793 577 aaKnown RBP11.95□□□□□ -0.5
PDGFC-207ENST00000511985 SEMA3FQ13275 785 aa11.95□□□□□ -0.5
PDGFC-207ENST00000511985 OXLD1Q5BKU9 147 aa11.95□□□□□ -0.5
PDGFC-207ENST00000511985 SV2AQ7L0J3 742 aa11.95□□□□□ -0.5
PDGFC-207ENST00000511985 CNKSR1Q969H4 720 aa11.95□□□□□ -0.5
PDGFC-207ENST00000511985 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
PDGFC-207ENST00000511985 USP4Q13107 963 aa11.93□□□□□ -0.5
PDGFC-207ENST00000511985 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
PDGFC-207ENST00000511985 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
PDGFC-207ENST00000511985 CENPCQ03188 943 aa11.91□□□□□ -0.5
PDGFC-207ENST00000511985 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
PDGFC-207ENST00000511985 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
PDGFC-207ENST00000511985 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
PDGFC-207ENST00000511985 PIK3CDO00329 1044 aa11.9□□□□□ -0.5
PDGFC-207ENST00000511985 SOX11P35716 441 aa11.9□□□□□ -0.5
PDGFC-207ENST00000511985 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
PDGFC-207ENST00000511985 HRH3Q9Y5N1 445 aa11.9□□□□□ -0.5
PDGFC-207ENST00000511985 SPATA31C2B4DYI2 1134 aa11.89□□□□□ -0.51
PDGFC-207ENST00000511985 RIPOR1Q6ZS17 1223 aa11.89□□□□□ -0.51
PDGFC-207ENST00000511985 XAGE2Q96GT9 111 aa11.89□□□□□ -0.51
PDGFC-207ENST00000511985 GAS2L1Q99501 681 aaPredicted RBP11.89□□□□□ -0.51
PDGFC-207ENST00000511985 ETNK1Q9HBU6 452 aa11.89□□□□□ -0.51
PDGFC-207ENST00000511985 DYRK1BQ9Y463 629 aa11.88□□□□□ -0.51
PDGFC-207ENST00000511985 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
PDGFC-207ENST00000511985 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
PDGFC-207ENST00000511985 DBN1Q16643 649 aa11.87□□□□□ -0.51
PDGFC-207ENST00000511985 TAS1R3Q7RTX0 852 aa11.87□□□□□ -0.51
PDGFC-207ENST00000511985 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
PDGFC-207ENST00000511985 RAD21O60216 631 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 PHKA2P46019 1235 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 ZNF837Q96EG3 531 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-207ENST00000511985 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-207ENST00000511985 ALG2Q9H553 416 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 TIMMDC1Q9NPL8 285 aa11.86□□□□□ -0.51
PDGFC-207ENST00000511985 TRIM22Q8IYM9 498 aa11.85□□□□□ -0.51
PDGFC-207ENST00000511985 POM121CA8CG34 1229 aa11.84□□□□□ -0.51
PDGFC-207ENST00000511985 GPR25O00155 361 aa11.84□□□□□ -0.51
PDGFC-207ENST00000511985 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
PDGFC-207ENST00000511985 GAS6Q14393 721 aa11.83□□□□□ -0.52
PDGFC-207ENST00000511985 SKIP12755 728 aa11.82□□□□□ -0.52
PDGFC-207ENST00000511985 SCNN1DP51172 638 aa11.82□□□□□ -0.52
PDGFC-207ENST00000511985 WDR44Q5JSH3 913 aa11.82□□□□□ -0.52
PDGFC-207ENST00000511985 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
PDGFC-207ENST00000511985 GDF10P55107 478 aa11.81□□□□□ -0.52
PDGFC-207ENST00000511985 TLR1Q15399 786 aa11.81□□□□□ -0.52
PDGFC-207ENST00000511985 WHAMMQ8TF30 809 aa11.81□□□□□ -0.52
PDGFC-207ENST00000511985 F11P03951 625 aa11.8□□□□□ -0.52
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