RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NR1I3-228ENST00000511676 ABCC6O95255 1503 aa12.05□□□□□ -0.48
NR1I3-228ENST00000511676 FLT4P35916 1363 aa12.05□□□□□ -0.48
NR1I3-228ENST00000511676 THSD7AQ9UPZ6 1657 aa12.04□□□□□ -0.48
NR1I3-228ENST00000511676 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NR1I3-228ENST00000511676 YY1P25490 414 aa12.04□□□□□ -0.48
NR1I3-228ENST00000511676 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-228ENST00000511676 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
NR1I3-228ENST00000511676 WDR17Q8IZU2 1322 aa12.04□□□□□ -0.48
NR1I3-228ENST00000511676 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NR1I3-228ENST00000511676 CARD10Q9BWT7 1032 aa12.03□□□□□ -0.48
NR1I3-228ENST00000511676 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
NR1I3-228ENST00000511676 BCL9O00512 1426 aa12.03□□□□□ -0.48
NR1I3-228ENST00000511676 ZBTB7CA1YPR0 619 aa12.02□□□□□ -0.49
NR1I3-228ENST00000511676 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
NR1I3-228ENST00000511676 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
NR1I3-228ENST00000511676 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
NR1I3-228ENST00000511676 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
NR1I3-228ENST00000511676 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NR1I3-228ENST00000511676 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NR1I3-228ENST00000511676 ARHGEF25Q86VW2 580 aa12□□□□□ -0.49
NR1I3-228ENST00000511676 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
NR1I3-228ENST00000511676 ZNF521Q96K83 1311 aa12□□□□□ -0.49
NR1I3-228ENST00000511676 COL5A2P05997 1499 aaPredicted RBP12□□□□□ -0.49
NR1I3-228ENST00000511676 IL13P35225 146 aa11.99□□□□□ -0.49
NR1I3-228ENST00000511676 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
NR1I3-228ENST00000511676 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
NR1I3-228ENST00000511676 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
NR1I3-228ENST00000511676 CAMTA1Q9Y6Y1 1673 aa11.98□□□□□ -0.49
NR1I3-228ENST00000511676 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-228ENST00000511676 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NR1I3-228ENST00000511676 NEFMP07197 916 aa11.97□□□□□ -0.49
NR1I3-228ENST00000511676 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
NR1I3-228ENST00000511676 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
NR1I3-228ENST00000511676 KDRP35968 1356 aa11.96□□□□□ -0.49
NR1I3-228ENST00000511676 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
NR1I3-228ENST00000511676 MTFR1LQ9H019 292 aa11.96□□□□□ -0.49
NR1I3-228ENST00000511676 PARP4Q9UKK3 1724 aaKnown RBP11.95□□□□□ -0.5
NR1I3-228ENST00000511676 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
NR1I3-228ENST00000511676 IL2RBP14784 551 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 AMPHP49418 695 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 IP6K1Q92551 441 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
NR1I3-228ENST00000511676 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
NR1I3-228ENST00000511676 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
NR1I3-228ENST00000511676 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NR1I3-228ENST00000511676 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-228ENST00000511676 POLD1P28340 1107 aa11.94□□□□□ -0.5
NR1I3-228ENST00000511676 HOXC9P31274 260 aa11.94□□□□□ -0.5
NR1I3-228ENST00000511676 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
NR1I3-228ENST00000511676 TXNRD1Q16881 649 aa11.94□□□□□ -0.5
NR1I3-228ENST00000511676 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
NR1I3-228ENST00000511676 IL16Q14005 1332 aa11.93□□□□□ -0.5
NR1I3-228ENST00000511676 RGPD3A6NKT7 1758 aaPredicted RBP11.93□□□□□ -0.5
NR1I3-228ENST00000511676 LTN1O94822 1766 aa11.93□□□□□ -0.5
NR1I3-228ENST00000511676 RGPD4Q7Z3J3 1758 aa11.93□□□□□ -0.5
NR1I3-228ENST00000511676 APAF1O14727 1248 aa11.93□□□□□ -0.5
NR1I3-228ENST00000511676 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
NR1I3-228ENST00000511676 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
NR1I3-228ENST00000511676 LMO7Q8WWI1 1683 aa11.92□□□□□ -0.5
NR1I3-228ENST00000511676 E9PSI1 815 aa11.92□□□□□ -0.5
NR1I3-228ENST00000511676 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
NR1I3-228ENST00000511676 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-228ENST00000511676 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-228ENST00000511676 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NR1I3-228ENST00000511676 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
NR1I3-228ENST00000511676 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
NR1I3-228ENST00000511676 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
NR1I3-228ENST00000511676 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NR1I3-228ENST00000511676 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
NR1I3-228ENST00000511676 FBLN1P23142 703 aa11.9□□□□□ -0.5
NR1I3-228ENST00000511676 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
NR1I3-228ENST00000511676 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
NR1I3-228ENST00000511676 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
NR1I3-228ENST00000511676 SOX12O15370 315 aa11.89□□□□□ -0.51
NR1I3-228ENST00000511676 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
NR1I3-228ENST00000511676 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
NR1I3-228ENST00000511676 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
NR1I3-228ENST00000511676 ARXQ96QS3 562 aa11.89□□□□□ -0.51
NR1I3-228ENST00000511676 RREB1Q92766 1687 aa11.89□□□□□ -0.51
NR1I3-228ENST00000511676 ERBB3P21860 1342 aa11.88□□□□□ -0.51
NR1I3-228ENST00000511676 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
NR1I3-228ENST00000511676 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
NR1I3-228ENST00000511676 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
NR1I3-228ENST00000511676 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
NR1I3-228ENST00000511676 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-228ENST00000511676 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
NR1I3-228ENST00000511676 ANKRD24Q8TF21 1146 aa11.87□□□□□ -0.51
NR1I3-228ENST00000511676 SYT17Q9BSW7 474 aa11.87□□□□□ -0.51
NR1I3-228ENST00000511676 COL18A1P39060 1754 aa11.87□□□□□ -0.51
NR1I3-228ENST00000511676 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
NR1I3-228ENST00000511676 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
NR1I3-228ENST00000511676 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
NR1I3-228ENST00000511676 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
NR1I3-228ENST00000511676 EYA1Q99502 592 aa11.86□□□□□ -0.51
NR1I3-228ENST00000511676 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms