RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 DCTN1Q14203 1278 aa20.97■□□□□ 0.95
CXCL3-204ENST00000511669 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
CXCL3-204ENST00000511669 ITPRIPQ8IWB1 547 aa20.97■□□□□ 0.95
CXCL3-204ENST00000511669 MCM10Q7L590 875 aa20.96■□□□□ 0.95
CXCL3-204ENST00000511669 API5Q9BZZ5 524 aaKnown RBP20.96■□□□□ 0.95
CXCL3-204ENST00000511669 BABAM1Q9NWV8 329 aa20.96■□□□□ 0.95
CXCL3-204ENST00000511669 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
CXCL3-204ENST00000511669 ARHGEF25Q86VW2 580 aa20.96■□□□□ 0.95
CXCL3-204ENST00000511669 MRPL50Q8N5N7 158 aaKnown RBP20.96■□□□□ 0.95
CXCL3-204ENST00000511669 CRB1P82279 1406 aa20.96■□□□□ 0.95
CXCL3-204ENST00000511669 ZBTB7CA1YPR0 619 aa20.95■□□□□ 0.94
CXCL3-204ENST00000511669 SOS1Q07889 1333 aaPredicted RBP20.94■□□□□ 0.94
CXCL3-204ENST00000511669 XPCQ01831 940 aaPredicted RBP20.94■□□□□ 0.94
CXCL3-204ENST00000511669 STRCQ7RTU9 1775 aa20.94■□□□□ 0.94
CXCL3-204ENST00000511669 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
CXCL3-204ENST00000511669 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
CXCL3-204ENST00000511669 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
CXCL3-204ENST00000511669 C8orf58Q8NAV2 365 aa20.93■□□□□ 0.94
CXCL3-204ENST00000511669 CHMP4AQ9BY43 222 aa20.92■□□□□ 0.94
CXCL3-204ENST00000511669 ABCC6O95255 1503 aa20.91■□□□□ 0.94
CXCL3-204ENST00000511669 AMOTQ4VCS5 1084 aa20.91■□□□□ 0.94
CXCL3-204ENST00000511669 TNNQ9UQP3 1299 aa20.91■□□□□ 0.94
CXCL3-204ENST00000511669 TNS3Q68CZ2 1445 aa20.91■□□□□ 0.94
CXCL3-204ENST00000511669 ELL2O00472 640 aaPredicted RBP20.9■□□□□ 0.94
CXCL3-204ENST00000511669 PLEKHO1Q53GL0 409 aaPredicted RBP20.9■□□□□ 0.94
CXCL3-204ENST00000511669 TMEM57Q8N5G2 664 aa20.9■□□□□ 0.94
CXCL3-204ENST00000511669 ANP32AP39687 249 aaKnown RBP20.89■□□□□ 0.94
CXCL3-204ENST00000511669 IGHDP01880 384 aa20.89■□□□□ 0.93
CXCL3-204ENST00000511669 PDE4AP27815 886 aa20.89■□□□□ 0.93
CXCL3-204ENST00000511669 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
CXCL3-204ENST00000511669 PTPRCP08575 1304 aa20.88■□□□□ 0.93
CXCL3-204ENST00000511669 CAMTA1Q9Y6Y1 1673 aa20.88■□□□□ 0.93
CXCL3-204ENST00000511669 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
CXCL3-204ENST00000511669 NCAPD2Q15021 1401 aa20.88■□□□□ 0.93
CXCL3-204ENST00000511669 HDAC1Q13547 482 aaPredicted RBP20.87■□□□□ 0.93
CXCL3-204ENST00000511669 NBPF6Q5VWK0 638 aa20.87■□□□□ 0.93
CXCL3-204ENST00000511669 NBPF4Q96M43 638 aa20.87■□□□□ 0.93
CXCL3-204ENST00000511669 BACH2Q9BYV9 841 aa20.87■□□□□ 0.93
CXCL3-204ENST00000511669 PCDHB15Q9Y5E8 787 aa20.87■□□□□ 0.93
CXCL3-204ENST00000511669 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
CXCL3-204ENST00000511669 FAM208AQ9UK61 1670 aaKnown RBP20.86■□□□□ 0.93
CXCL3-204ENST00000511669 ABCC4O15439 1325 aa20.86■□□□□ 0.93
CXCL3-204ENST00000511669 ZBTB40Q9NUA8 1239 aa20.86■□□□□ 0.93
CXCL3-204ENST00000511669 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
CXCL3-204ENST00000511669 LMO7Q8WWI1 1683 aa20.85■□□□□ 0.93
CXCL3-204ENST00000511669 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
CXCL3-204ENST00000511669 MED1Q15648 1581 aaPredicted RBP20.85■□□□□ 0.93
CXCL3-204ENST00000511669 PXDNQ92626 1479 aa20.84■□□□□ 0.93
CXCL3-204ENST00000511669 AKAP4Q5JQC9 854 aa20.84■□□□□ 0.93
CXCL3-204ENST00000511669 C1orf141Q5JVX7 400 aa20.84■□□□□ 0.93
CXCL3-204ENST00000511669 STK31Q9BXU1 1019 aa20.84■□□□□ 0.93
CXCL3-204ENST00000511669 RGPD2P0DJD1 1756 aa20.84■□□□□ 0.93
CXCL3-204ENST00000511669 OVOS2A0A0G2JMS6 1433 aa20.84■□□□□ 0.93
CXCL3-204ENST00000511669 RGS3P49796 1198 aa20.83■□□□□ 0.93
CXCL3-204ENST00000511669 FAM161AQ3B820 660 aa20.83■□□□□ 0.93
CXCL3-204ENST00000511669 SPATA31A3Q5VYP0 1347 aa20.83■□□□□ 0.93
CXCL3-204ENST00000511669 CACNA1FO60840 1977 aa20.82■□□□□ 0.92
CXCL3-204ENST00000511669 CCDC30Q5VVM6 783 aa20.82■□□□□ 0.92
CXCL3-204ENST00000511669 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
CXCL3-204ENST00000511669 CEMIPQ8WUJ3 1361 aa20.81■□□□□ 0.92
CXCL3-204ENST00000511669 ERBB3P21860 1342 aa20.8■□□□□ 0.92
CXCL3-204ENST00000511669 PLEKHG5O94827 1062 aa20.8■□□□□ 0.92
CXCL3-204ENST00000511669 LRRC59Q96AG4 307 aaKnown RBP20.8■□□□□ 0.92
CXCL3-204ENST00000511669 ZC3H6P61129 1189 aaKnown RBP20.79■□□□□ 0.92
CXCL3-204ENST00000511669 TEFQ10587 303 aa20.79■□□□□ 0.92
CXCL3-204ENST00000511669 IL17REQ8NFR9 667 aa20.79■□□□□ 0.92
CXCL3-204ENST00000511669 CPDO75976 1380 aa20.79■□□□□ 0.92
CXCL3-204ENST00000511669 RGPD5Q99666 1765 aa20.79■□□□□ 0.92
CXCL3-204ENST00000511669 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
CXCL3-204ENST00000511669 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
CXCL3-204ENST00000511669 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
CXCL3-204ENST00000511669 RAPGEF4Q8WZA2 1011 aa20.78■□□□□ 0.92
CXCL3-204ENST00000511669 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
CXCL3-204ENST00000511669 CRYBG1Q9Y4K1 1723 aa20.77■□□□□ 0.92
CXCL3-204ENST00000511669 ZNF335Q9H4Z2 1342 aaPredicted RBP20.77■□□□□ 0.92
CXCL3-204ENST00000511669 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
CXCL3-204ENST00000511669 HOXB7P09629 217 aa20.77■□□□□ 0.92
CXCL3-204ENST00000511669 MIS18AQ9NYP9 233 aa20.77■□□□□ 0.92
CXCL3-204ENST00000511669 PDZRN3Q9UPQ7 1066 aa20.76■□□□□ 0.91
CXCL3-204ENST00000511669 VIRMAQ69YN4 1812 aaKnown RBP20.75■□□□□ 0.91
CXCL3-204ENST00000511669 CSB-PGBD3P0DP91 1061 aa20.75■□□□□ 0.91
CXCL3-204ENST00000511669 KRT24Q2M2I5 525 aa20.75■□□□□ 0.91
CXCL3-204ENST00000511669 ERICH6Q7L0X2 663 aa20.75■□□□□ 0.91
CXCL3-204ENST00000511669 GCC1Q96CN9 775 aa20.75■□□□□ 0.91
CXCL3-204ENST00000511669 COL18A1P39060 1754 aa20.75■□□□□ 0.91
CXCL3-204ENST00000511669 TATP17735 454 aaPredicted RBP20.75■□□□□ 0.91
CXCL3-204ENST00000511669 CCT4P50991 539 aaKnown RBP20.74■□□□□ 0.91
CXCL3-204ENST00000511669 SMC5Q8IY18 1101 aa20.74■□□□□ 0.91
CXCL3-204ENST00000511669 DDX17Q92841 729 aaKnown RBP20.74■□□□□ 0.91
CXCL3-204ENST00000511669 NLRP2Q9NX02 1062 aa20.74■□□□□ 0.91
CXCL3-204ENST00000511669 SPG7Q9UQ90 795 aa20.74■□□□□ 0.91
CXCL3-204ENST00000511669 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
CXCL3-204ENST00000511669 KDM3BQ7LBC6 1761 aa20.73■□□□□ 0.91
CXCL3-204ENST00000511669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.73■□□□□ 0.91
CXCL3-204ENST00000511669 SOS2Q07890 1332 aaPredicted RBP20.72■□□□□ 0.91
CXCL3-204ENST00000511669 SKAP1Q86WV1 359 aa20.72■□□□□ 0.91
CXCL3-204ENST00000511669 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
CXCL3-204ENST00000511669 BTBD11A6QL63 1104 aa20.7■□□□□ 0.9
CXCL3-204ENST00000511669 DDRGK1Q96HY6 314 aa20.7■□□□□ 0.9
CXCL3-204ENST00000511669 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms