RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
SCLT1-209ENST00000511426 RGPD5Q99666 1765 aa19.62■□□□□ 0.73
SCLT1-209ENST00000511426 CHL1O00533 1208 aa19.62■□□□□ 0.73
SCLT1-209ENST00000511426 IRX6P78412 446 aaPredicted RBP19.62■□□□□ 0.73
SCLT1-209ENST00000511426 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
SCLT1-209ENST00000511426 COL16A1Q07092 1604 aaPredicted RBP19.61■□□□□ 0.73
SCLT1-209ENST00000511426 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
SCLT1-209ENST00000511426 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
SCLT1-209ENST00000511426 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
SCLT1-209ENST00000511426 AKAP4Q5JQC9 854 aa19.61■□□□□ 0.73
SCLT1-209ENST00000511426 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
SCLT1-209ENST00000511426 USHBP1Q8N6Y0 703 aa19.61■□□□□ 0.73
SCLT1-209ENST00000511426 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
SCLT1-209ENST00000511426 WDR17Q8IZU2 1322 aa19.61■□□□□ 0.73
SCLT1-209ENST00000511426 COL5A2P05997 1499 aaPredicted RBP19.61■□□□□ 0.73
SCLT1-209ENST00000511426 CEMIPQ8WUJ3 1361 aa19.6■□□□□ 0.73
SCLT1-209ENST00000511426 SOS1Q07889 1333 aaPredicted RBP19.6■□□□□ 0.73
SCLT1-209ENST00000511426 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
SCLT1-209ENST00000511426 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
SCLT1-209ENST00000511426 MS4A1P11836 297 aa19.6■□□□□ 0.73
SCLT1-209ENST00000511426 RAPGEF4Q8WZA2 1011 aa19.6■□□□□ 0.73
SCLT1-209ENST00000511426 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
SCLT1-209ENST00000511426 PHLPP1O60346 1717 aa19.59■□□□□ 0.73
SCLT1-209ENST00000511426 MCM10Q7L590 875 aa19.59■□□□□ 0.73
SCLT1-209ENST00000511426 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
SCLT1-209ENST00000511426 KIF16BQ96L93 1317 aa19.58■□□□□ 0.72
SCLT1-209ENST00000511426 DCTN1Q14203 1278 aa19.58■□□□□ 0.72
SCLT1-209ENST00000511426 CHRNA2Q15822 529 aa19.58■□□□□ 0.72
SCLT1-209ENST00000511426 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.72
SCLT1-209ENST00000511426 COL14A1Q05707 1796 aaKnown RBP19.57■□□□□ 0.72
SCLT1-209ENST00000511426 BCAR3O75815 825 aa19.57■□□□□ 0.72
SCLT1-209ENST00000511426 TATP17735 454 aaPredicted RBP19.57■□□□□ 0.72
SCLT1-209ENST00000511426 AAMPQ13685 434 aa19.57■□□□□ 0.72
SCLT1-209ENST00000511426 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
SCLT1-209ENST00000511426 SPG7Q9UQ90 795 aa19.56■□□□□ 0.72
SCLT1-209ENST00000511426 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
SCLT1-209ENST00000511426 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
SCLT1-209ENST00000511426 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
SCLT1-209ENST00000511426 CARD10Q9BWT7 1032 aa19.55■□□□□ 0.72
SCLT1-209ENST00000511426 TWISTNBQ3B726 338 aaPredicted RBP19.54■□□□□ 0.72
SCLT1-209ENST00000511426 PKD1L3Q7Z443 1732 aa19.54■□□□□ 0.72
SCLT1-209ENST00000511426 SMC4Q9NTJ3 1288 aa19.54■□□□□ 0.72
SCLT1-209ENST00000511426 IPO8O15397 1037 aaKnown RBP19.53■□□□□ 0.72
SCLT1-209ENST00000511426 PLIN1O60240 522 aa19.53■□□□□ 0.72
SCLT1-209ENST00000511426 VAMP4O75379 141 aa19.53■□□□□ 0.72
SCLT1-209ENST00000511426 TAF7Q15545 349 aaPredicted RBP19.53■□□□□ 0.72
SCLT1-209ENST00000511426 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
SCLT1-209ENST00000511426 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
SCLT1-209ENST00000511426 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
SCLT1-209ENST00000511426 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
SCLT1-209ENST00000511426 MEGF6O75095 1541 aa19.52■□□□□ 0.72
SCLT1-209ENST00000511426 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.71
SCLT1-209ENST00000511426 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.71
SCLT1-209ENST00000511426 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.71
SCLT1-209ENST00000511426 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.71
SCLT1-209ENST00000511426 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
SCLT1-209ENST00000511426 ARHGAP45Q92619 1136 aa19.51■□□□□ 0.71
SCLT1-209ENST00000511426 EXOC6Q8TAG9 804 aa19.5■□□□□ 0.71
SCLT1-209ENST00000511426 EVA1CP58658 441 aa19.49■□□□□ 0.71
SCLT1-209ENST00000511426 TEFQ10587 303 aa19.49■□□□□ 0.71
SCLT1-209ENST00000511426 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
SCLT1-209ENST00000511426 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
SCLT1-209ENST00000511426 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
SCLT1-209ENST00000511426 CERKQ8TCT0 537 aa19.48■□□□□ 0.71
SCLT1-209ENST00000511426 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
SCLT1-209ENST00000511426 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
SCLT1-209ENST00000511426 C8orf58Q8NAV2 365 aa19.47■□□□□ 0.71
SCLT1-209ENST00000511426 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
SCLT1-209ENST00000511426 HOXB7P09629 217 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 PHKG2P15735 406 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 PIP4K2BP78356 416 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 C20orf194Q5TEA3 1177 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 MRC1P22897 1456 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 IL2RBP14784 551 aa19.46■□□□□ 0.71
SCLT1-209ENST00000511426 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
SCLT1-209ENST00000511426 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
SCLT1-209ENST00000511426 JCADQ9P266 1359 aa19.45■□□□□ 0.7
SCLT1-209ENST00000511426 DZIP1LQ8IYY4 767 aaKnown RBP19.45■□□□□ 0.7
SCLT1-209ENST00000511426 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
SCLT1-209ENST00000511426 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
SCLT1-209ENST00000511426 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
SCLT1-209ENST00000511426 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
SCLT1-209ENST00000511426 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
SCLT1-209ENST00000511426 MRPL50Q8N5N7 158 aaKnown RBP19.44■□□□□ 0.7
SCLT1-209ENST00000511426 BTG4Q9NY30 223 aa19.44■□□□□ 0.7
SCLT1-209ENST00000511426 CHMP4BQ9H444 224 aaKnown RBP19.43■□□□□ 0.7
SCLT1-209ENST00000511426 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
SCLT1-209ENST00000511426 MPRIPQ6WCQ1 1025 aa19.43■□□□□ 0.7
SCLT1-209ENST00000511426 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
SCLT1-209ENST00000511426 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
SCLT1-209ENST00000511426 SCN11AQ9UI33 1791 aa19.42■□□□□ 0.7
SCLT1-209ENST00000511426 TRIM27P14373 513 aa19.42■□□□□ 0.7
SCLT1-209ENST00000511426 ZCRB1Q8TBF4 217 aaKnown RBP19.42■□□□□ 0.7
SCLT1-209ENST00000511426 API5Q9BZZ5 524 aaKnown RBP19.42■□□□□ 0.7
SCLT1-209ENST00000511426 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
SCLT1-209ENST00000511426 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
SCLT1-209ENST00000511426 SIPA1L3O60292 1781 aaPredicted RBP19.42■□□□□ 0.7
SCLT1-209ENST00000511426 PTPRCP08575 1304 aa19.41■□□□□ 0.7
SCLT1-209ENST00000511426 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms