RNA–Protein interactions for RNA: ENST00000511226.5

SPOCK3-216, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-216ENST00000511226 PNPLA7Q6ZV29 1317 aa25.83■■□□□ 1.73
SPOCK3-216ENST00000511226 GOLGB1Q14789 3259 aaKnown RBP25.83■■□□□ 1.73
SPOCK3-216ENST00000511226 NPC1L1Q9UHC9 1359 aa25.82■■□□□ 1.72
SPOCK3-216ENST00000511226 PAPPAQ13219 1627 aa25.82■■□□□ 1.72
SPOCK3-216ENST00000511226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.82■■□□□ 1.72
SPOCK3-216ENST00000511226 TFCP2L1Q9NZI6 479 aa25.82■■□□□ 1.72
SPOCK3-216ENST00000511226 NSD2O96028 1365 aa25.82■■□□□ 1.72
SPOCK3-216ENST00000511226 FYB1O15117 783 aa25.8■■□□□ 1.72
SPOCK3-216ENST00000511226 SOX12O15370 315 aa25.8■■□□□ 1.72
SPOCK3-216ENST00000511226 CAPN15O75808 1086 aa25.79■■□□□ 1.72
SPOCK3-216ENST00000511226 ARHGEF25Q86VW2 580 aa25.79■■□□□ 1.72
SPOCK3-216ENST00000511226 WNK3Q9BYP7 1800 aa25.79■■□□□ 1.72
SPOCK3-216ENST00000511226 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
SPOCK3-216ENST00000511226 USP31Q70CQ4 1352 aa25.78■■□□□ 1.72
SPOCK3-216ENST00000511226 COL18A1P39060 1754 aa25.77■■□□□ 1.72
SPOCK3-216ENST00000511226 TNS2Q63HR2 1409 aa25.77■■□□□ 1.72
SPOCK3-216ENST00000511226 SLIT3O75094 1523 aa25.77■■□□□ 1.72
SPOCK3-216ENST00000511226 KCNQ4P56696 695 aa25.76■■□□□ 1.71
SPOCK3-216ENST00000511226 NHSQ6T4R5 1651 aa25.76■■□□□ 1.71
SPOCK3-216ENST00000511226 SLC27A3Q5K4L6 730 aa25.75■■□□□ 1.71
SPOCK3-216ENST00000511226 NME9Q86XW9 330 aa25.75■■□□□ 1.71
SPOCK3-216ENST00000511226 COG3Q96JB2 828 aa25.75■■□□□ 1.71
SPOCK3-216ENST00000511226 MSH5O43196 834 aa25.74■■□□□ 1.71
SPOCK3-216ENST00000511226 KIF20BQ96Q89 1820 aa25.74■■□□□ 1.71
SPOCK3-216ENST00000511226 APLP1P51693 650 aa25.73■■□□□ 1.71
SPOCK3-216ENST00000511226 PIK3C2AO00443 1686 aa25.72■■□□□ 1.71
SPOCK3-216ENST00000511226 KCNH5Q8NCM2 988 aa25.72■■□□□ 1.71
SPOCK3-216ENST00000511226 GGNBP2Q9H3C7 697 aa25.72■■□□□ 1.71
SPOCK3-216ENST00000511226 ADCY9O60503 1353 aa25.71■■□□□ 1.71
SPOCK3-216ENST00000511226 DNAJC5GQ8N7S2 189 aa25.71■■□□□ 1.71
SPOCK3-216ENST00000511226 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
SPOCK3-216ENST00000511226 KIF3CO14782 793 aa25.7■■□□□ 1.7
SPOCK3-216ENST00000511226 COL13A1Q5TAT6 717 aaPredicted RBP25.69■■□□□ 1.7
SPOCK3-216ENST00000511226 NLRP2Q9NX02 1062 aa25.69■■□□□ 1.7
SPOCK3-216ENST00000511226 BTAF1O14981 1849 aa25.68■■□□□ 1.7
SPOCK3-216ENST00000511226 CC2D1BQ5T0F9 858 aaKnown RBP25.68■■□□□ 1.7
SPOCK3-216ENST00000511226 MSL1Q68DK7 614 aa25.68■■□□□ 1.7
SPOCK3-216ENST00000511226 MORC1Q86VD1 984 aa25.68■■□□□ 1.7
SPOCK3-216ENST00000511226 ANKRD26Q9UPS8 1709 aa25.68■■□□□ 1.7
SPOCK3-216ENST00000511226 KAT6BQ8WYB5 2073 aa25.67■■□□□ 1.7
SPOCK3-216ENST00000511226 IL2RBP14784 551 aa25.67■■□□□ 1.7
SPOCK3-216ENST00000511226 RALBP1Q15311 655 aa25.66■■□□□ 1.7
SPOCK3-216ENST00000511226 COL24A1Q17RW2 1714 aa25.66■■□□□ 1.7
SPOCK3-216ENST00000511226 RGPD5Q99666 1765 aa25.65■■□□□ 1.7
SPOCK3-216ENST00000511226 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
SPOCK3-216ENST00000511226 COL23A1Q86Y22 540 aaPredicted RBP25.64■■□□□ 1.7
SPOCK3-216ENST00000511226 CD2APQ9Y5K6 639 aa25.64■■□□□ 1.7
SPOCK3-216ENST00000511226 ABCC6O95255 1503 aa25.63■■□□□ 1.69
SPOCK3-216ENST00000511226 ANP32CO43423 234 aa25.63■■□□□ 1.69
SPOCK3-216ENST00000511226 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
SPOCK3-216ENST00000511226 DDX54Q8TDD1 881 aaKnown RBP25.62■■□□□ 1.69
SPOCK3-216ENST00000511226 SYTL4Q96C24 671 aaPredicted RBP25.62■■□□□ 1.69
SPOCK3-216ENST00000511226 QSER1Q2KHR3 1735 aa25.6■■□□□ 1.69
SPOCK3-216ENST00000511226 PRKRIP1Q9H875 184 aaPredicted RBP25.6■■□□□ 1.69
SPOCK3-216ENST00000511226 TNS4Q8IZW8 715 aa25.59■■□□□ 1.69
SPOCK3-216ENST00000511226 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
SPOCK3-216ENST00000511226 PRELPP51888 382 aa25.57■■□□□ 1.68
SPOCK3-216ENST00000511226 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
SPOCK3-216ENST00000511226 CCNL1Q9UK58 526 aaPredicted RBP25.56■■□□□ 1.68
SPOCK3-216ENST00000511226 TOMM70O94826 608 aa25.55■■□□□ 1.68
SPOCK3-216ENST00000511226 ERBB3P21860 1342 aa25.55■■□□□ 1.68
SPOCK3-216ENST00000511226 TUBGCP6Q96RT7 1819 aa25.54■■□□□ 1.68
SPOCK3-216ENST00000511226 KIF24Q5T7B8 1368 aa25.54■■□□□ 1.68
SPOCK3-216ENST00000511226 NFAT5O94916 1531 aa25.53■■□□□ 1.68
SPOCK3-216ENST00000511226 TNNT2P45379 298 aaPredicted RBP25.53■■□□□ 1.68
SPOCK3-216ENST00000511226 ANKRD24Q8TF21 1146 aa25.52■■□□□ 1.68
SPOCK3-216ENST00000511226 HTRA3P83110 453 aa25.51■■□□□ 1.67
SPOCK3-216ENST00000511226 IGSF1Q8N6C5 1336 aa25.51■■□□□ 1.67
SPOCK3-216ENST00000511226 MYBBP1AQ9BQG0 1328 aaKnown RBP25.51■■□□□ 1.67
SPOCK3-216ENST00000511226 PPP2R1AP30153 589 aa25.5■■□□□ 1.67
SPOCK3-216ENST00000511226 POLKQ9UBT6 870 aa25.5■■□□□ 1.67
SPOCK3-216ENST00000511226 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
SPOCK3-216ENST00000511226 KLRG1Q96E93 195 aa25.49■■□□□ 1.67
SPOCK3-216ENST00000511226 RTL1A6NKG5 1358 aa25.47■■□□□ 1.67
SPOCK3-216ENST00000511226 MAP3K19Q56UN5 1328 aa25.47■■□□□ 1.67
SPOCK3-216ENST00000511226 FBLN1P23142 703 aa25.47■■□□□ 1.67
SPOCK3-216ENST00000511226 AMPHP49418 695 aa25.47■■□□□ 1.67
SPOCK3-216ENST00000511226 RRS1Q15050 365 aaKnown RBP25.47■■□□□ 1.67
SPOCK3-216ENST00000511226 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
SPOCK3-216ENST00000511226 MTHFSP49914 203 aa25.46■■□□□ 1.67
SPOCK3-216ENST00000511226 JMYQ8N9B5 988 aa25.46■■□□□ 1.67
SPOCK3-216ENST00000511226 IP6K1Q92551 441 aa25.46■■□□□ 1.67
SPOCK3-216ENST00000511226 FLT4P35916 1363 aa25.44■■□□□ 1.66
SPOCK3-216ENST00000511226 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
SPOCK3-216ENST00000511226 LTN1O94822 1766 aa25.44■■□□□ 1.66
SPOCK3-216ENST00000511226 FLAD1Q8NFF5 587 aa25.43■■□□□ 1.66
SPOCK3-216ENST00000511226 CFAP53Q96M91 514 aa25.43■■□□□ 1.66
SPOCK3-216ENST00000511226 NMRK2Q9NPI5 230 aa25.43■■□□□ 1.66
SPOCK3-216ENST00000511226 PPM1GO15355 546 aaPredicted RBP25.42■■□□□ 1.66
SPOCK3-216ENST00000511226 HOXC9P31274 260 aa25.42■■□□□ 1.66
SPOCK3-216ENST00000511226 INSRP06213 1382 aa25.42■■□□□ 1.66
SPOCK3-216ENST00000511226 LTV1Q96GA3 475 aaPredicted RBP25.39■■□□□ 1.66
SPOCK3-216ENST00000511226 RBM46Q8TBY0 533 aaKnown RBP25.38■■□□□ 1.65
SPOCK3-216ENST00000511226 C16orf71Q8IYS4 520 aaPredicted RBP25.37■■□□□ 1.65
SPOCK3-216ENST00000511226 LY75O60449 1722 aa25.37■■□□□ 1.65
SPOCK3-216ENST00000511226 CCER2I3L3R5 266 aa25.35■■□□□ 1.65
SPOCK3-216ENST00000511226 HSP90AB2PQ58FF8 381 aa25.35■■□□□ 1.65
SPOCK3-216ENST00000511226 ZCRB1Q8TBF4 217 aaKnown RBP25.35■■□□□ 1.65
SPOCK3-216ENST00000511226 WDR90Q96KV7 1748 aa25.34■■□□□ 1.65
SPOCK3-216ENST00000511226 DIAPH1O60610 1272 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms