RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 USHBP1Q8N6Y0 703 aa7.33□□□□□ -1.24
PROM1-211ENST00000511153 BTG4Q9NY30 223 aa7.33□□□□□ -1.24
PROM1-211ENST00000511153 ANKRD26Q9UPS8 1709 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 COL22A1Q8NFW1 1626 aaPredicted RBP7.32□□□□□ -1.24
PROM1-211ENST00000511153 AFF2P51816 1311 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 USP31Q70CQ4 1352 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 CSB-PGBD3P0DP91 1061 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 MTHFSP49914 203 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 EVA1CP58658 441 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 CCDC184Q52MB2 194 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 HSP90AB2PQ58FF8 381 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 MFRPQ9BY79 579 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 BMP2KQ9NSY1 1161 aaPredicted RBP7.32□□□□□ -1.24
PROM1-211ENST00000511153 POLKQ9UBT6 870 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 PEAK1Q9H792 1746 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 NFAT5O94916 1531 aa7.32□□□□□ -1.24
PROM1-211ENST00000511153 TTLL13PA6NNM8 815 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 ANP32CO43423 234 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 GABBR2O75899 941 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 PPP2R1AP30153 589 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 SLIT3O75094 1523 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 RGPD2P0DJD1 1756 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 SPATA31A6Q5VVP1 1343 aa7.31□□□□□ -1.24
PROM1-211ENST00000511153 PLCH1Q4KWH8 1693 aa7.3□□□□□ -1.24
PROM1-211ENST00000511153 HOXC9P31274 260 aa7.3□□□□□ -1.24
PROM1-211ENST00000511153 LARP1Q6PKG0 1096 aaKnown RBP7.3□□□□□ -1.24
PROM1-211ENST00000511153 ARHGEF25Q86VW2 580 aa7.3□□□□□ -1.24
PROM1-211ENST00000511153 KCNH5Q8NCM2 988 aa7.3□□□□□ -1.24
PROM1-211ENST00000511153 USP21Q9UK80 565 aa7.3□□□□□ -1.24
PROM1-211ENST00000511153 BRD4O60885 1362 aaPredicted RBP7.3□□□□□ -1.24
PROM1-211ENST00000511153 CAMTA1Q9Y6Y1 1673 aa7.3□□□□□ -1.24
PROM1-211ENST00000511153 A0A0G2JS52 829 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 MYT1Q01538 1121 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 ANKRD24Q8TF21 1146 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 PRKRIP1Q9H875 184 aaPredicted RBP7.29□□□□□ -1.24
PROM1-211ENST00000511153 NLRP2Q9NX02 1062 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 NSD2O96028 1365 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
PROM1-211ENST00000511153 PPP1R37O75864 691 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 TOM1L2Q6ZVM7 507 aa7.29□□□□□ -1.24
PROM1-211ENST00000511153 PARD3Q8TEW0 1356 aa7.28□□□□□ -1.24
PROM1-211ENST00000511153 COL18A1P39060 1754 aa7.28□□□□□ -1.24
PROM1-211ENST00000511153 HMOX1P09601 288 aa7.28□□□□□ -1.24
PROM1-211ENST00000511153 EIF4A2Q14240 407 aaKnown RBP7.28□□□□□ -1.24
PROM1-211ENST00000511153 POTEAQ6S8J7 498 aa7.28□□□□□ -1.24
PROM1-211ENST00000511153 IP6K1Q92551 441 aa7.28□□□□□ -1.24
PROM1-211ENST00000511153 RGS17Q9UGC6 210 aaPredicted RBP7.28□□□□□ -1.24
PROM1-211ENST00000511153 USP54Q70EL1 1684 aa7.28□□□□□ -1.24
PROM1-211ENST00000511153 COL14A1Q05707 1796 aaKnown RBP7.27□□□□□ -1.24
PROM1-211ENST00000511153 ATN1P54259 1190 aaPredicted RBP7.27□□□□□ -1.25
PROM1-211ENST00000511153 AEBP1Q8IUX7 1158 aa7.27□□□□□ -1.25
PROM1-211ENST00000511153 FBXO22Q8NEZ5 403 aa7.27□□□□□ -1.25
PROM1-211ENST00000511153 QTRT2Q9H974 415 aaKnown RBP7.27□□□□□ -1.25
PROM1-211ENST00000511153 TIE1P35590 1138 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 RALBP1Q15311 655 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 FAM98CQ17RN3 349 aaKnown RBP7.26□□□□□ -1.25
PROM1-211ENST00000511153 FAM182BQ5T319 152 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 NBPF6Q5VWK0 638 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 UNC5CLQ8IV45 518 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 NBPF4Q96M43 638 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 MRS2Q9HD23 443 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 TRIM35Q9UPQ4 493 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 MYBBP1AQ9BQG0 1328 aaKnown RBP7.26□□□□□ -1.25
PROM1-211ENST00000511153 LMO7Q8WWI1 1683 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 CPDO75976 1380 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 FLT4P35916 1363 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 AATKQ6ZMQ8 1374 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 NRAPQ86VF7 1730 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 COL5A2P05997 1499 aaPredicted RBP7.26□□□□□ -1.25
PROM1-211ENST00000511153 BCL9LQ86UU0 1499 aa7.26□□□□□ -1.25
PROM1-211ENST00000511153 CCDC146Q8IYE0 955 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 MS4A4AQ96JQ5 239 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 EYA1Q99502 592 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 NPC1L1Q9UHC9 1359 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 ATMINO43313 823 aaPredicted RBP7.25□□□□□ -1.25
PROM1-211ENST00000511153 DIAPH1O60610 1272 aaKnown RBP7.25□□□□□ -1.25
PROM1-211ENST00000511153 U2AF1L5P0DN76 240 aaPredicted RBP7.25□□□□□ -1.25
PROM1-211ENST00000511153 U2AF1Q01081 240 aaKnown RBP eCLIP7.25□□□□□ -1.25
PROM1-211ENST00000511153 SULT6B1Q6IMI4 303 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 FAM9BQ8IZU0 186 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 CFAP53Q96M91 514 aa7.25□□□□□ -1.25
PROM1-211ENST00000511153 ERBB3P21860 1342 aa7.24□□□□□ -1.25
PROM1-211ENST00000511153 SLIT2O94813 1529 aa7.24□□□□□ -1.25
PROM1-211ENST00000511153 IL13P35225 146 aa7.24□□□□□ -1.25
PROM1-211ENST00000511153 PELP1Q8IZL8 1130 aaKnown RBP7.24□□□□□ -1.25
PROM1-211ENST00000511153 FNBP4Q8N3X1 1017 aaPredicted RBP7.24□□□□□ -1.25
PROM1-211ENST00000511153 SALL2Q9Y467 1007 aaPredicted RBP7.24□□□□□ -1.25
PROM1-211ENST00000511153 WDR17Q8IZU2 1322 aa7.24□□□□□ -1.25
PROM1-211ENST00000511153 INSRP06213 1382 aa7.24□□□□□ -1.25
PROM1-211ENST00000511153 CDK12Q9NYV4 1490 aaPredicted RBP7.24□□□□□ -1.25
PROM1-211ENST00000511153 KAT6BQ8WYB5 2073 aa7.23□□□□□ -1.25
PROM1-211ENST00000511153 GOLGA2Q08379 1002 aa7.23□□□□□ -1.25
PROM1-211ENST00000511153 GJD4Q96KN9 370 aaPredicted RBP7.23□□□□□ -1.25
PROM1-211ENST00000511153 TRPC5Q9UL62 973 aaPredicted RBP7.23□□□□□ -1.25
PROM1-211ENST00000511153 SMG6Q86US8 1419 aaKnown RBP7.23□□□□□ -1.25
PROM1-211ENST00000511153 NWD2Q9ULI1 1742 aa7.23□□□□□ -1.25
PROM1-211ENST00000511153 GLI3P10071 1580 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 COL3A1P02461 1466 aaPredicted RBP7.22□□□□□ -1.25
PROM1-211ENST00000511153 ATRNO75882 1429 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 BLMP54132 1417 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms