RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
CLCN3-207ENST00000511092 CFAP44Q96MT7 982 aa10.14□□□□□ -0.79
CLCN3-207ENST00000511092 STK32BQ9NY57 414 aa10.14□□□□□ -0.79
CLCN3-207ENST00000511092 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
CLCN3-207ENST00000511092 TECPR2O15040 1411 aa10.13□□□□□ -0.79
CLCN3-207ENST00000511092 SPATA31A3Q5VYP0 1347 aa10.12□□□□□ -0.79
CLCN3-207ENST00000511092 LBX1P52954 281 aa10.12□□□□□ -0.79
CLCN3-207ENST00000511092 KRTAP3-3Q9BYR6 98 aa10.12□□□□□ -0.79
CLCN3-207ENST00000511092 KRTAP3-2Q9BYR7 98 aa10.12□□□□□ -0.79
CLCN3-207ENST00000511092 FSTL1Q12841 308 aa10.11□□□□□ -0.79
CLCN3-207ENST00000511092 CCDC18Q5T9S5 1454 aa10.1□□□□□ -0.79
CLCN3-207ENST00000511092 ERBB3P21860 1342 aa10.1□□□□□ -0.79
CLCN3-207ENST00000511092 VIRMAQ69YN4 1812 aaKnown RBP10.1□□□□□ -0.79
CLCN3-207ENST00000511092 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-207ENST00000511092 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
CLCN3-207ENST00000511092 RRBP1Q9P2E9 1410 aaKnown RBP10.09□□□□□ -0.79
CLCN3-207ENST00000511092 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-207ENST00000511092 PHRF1Q9P1Y6 1649 aaKnown RBP10.09□□□□□ -0.79
CLCN3-207ENST00000511092 PLSCR1O15162 318 aa10.09□□□□□ -0.79
CLCN3-207ENST00000511092 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
CLCN3-207ENST00000511092 METP08581 1390 aa10.09□□□□□ -0.79
CLCN3-207ENST00000511092 CCNB3Q8WWL7 1395 aa10.09□□□□□ -0.79
CLCN3-207ENST00000511092 PARP4Q9UKK3 1724 aaKnown RBP10.08□□□□□ -0.8
CLCN3-207ENST00000511092 CTCFP49711 727 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-207ENST00000511092 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
CLCN3-207ENST00000511092 SPATA31A1Q5TZJ5 1347 aa10.07□□□□□ -0.8
CLCN3-207ENST00000511092 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
CLCN3-207ENST00000511092 CRYBG1Q9Y4K1 1723 aa10.07□□□□□ -0.8
CLCN3-207ENST00000511092 TNS3Q68CZ2 1445 aa10.07□□□□□ -0.8
CLCN3-207ENST00000511092 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
CLCN3-207ENST00000511092 RGPD8O14715 1765 aaPredicted RBP10.06□□□□□ -0.8
CLCN3-207ENST00000511092 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
CLCN3-207ENST00000511092 ADAMTS7Q9UKP4 1686 aa10.06□□□□□ -0.8
CLCN3-207ENST00000511092 FMN2Q9NZ56 1722 aa10.05□□□□□ -0.8
CLCN3-207ENST00000511092 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
CLCN3-207ENST00000511092 ARSIQ5FYB1 569 aa10.05□□□□□ -0.8
CLCN3-207ENST00000511092 C16orf71Q8IYS4 520 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-207ENST00000511092 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
CLCN3-207ENST00000511092 CACNA1AO00555 2505 aa10.04□□□□□ -0.8
CLCN3-207ENST00000511092 KIF1AQ12756 1690 aa10.04□□□□□ -0.8
CLCN3-207ENST00000511092 HSPA8P11142 646 aaKnown RBP10.04□□□□□ -0.8
CLCN3-207ENST00000511092 MMRN1Q13201 1228 aa10.04□□□□□ -0.8
CLCN3-207ENST00000511092 TXNRD1Q16881 649 aa10.04□□□□□ -0.8
CLCN3-207ENST00000511092 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-207ENST00000511092 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
CLCN3-207ENST00000511092 CDC42BPGQ6DT37 1551 aa10.04□□□□□ -0.8
CLCN3-207ENST00000511092 POLD1P28340 1107 aa10.03□□□□□ -0.8
CLCN3-207ENST00000511092 FOXK1P85037 733 aa10.03□□□□□ -0.8
CLCN3-207ENST00000511092 ZNF827Q17R98 1081 aa10.03□□□□□ -0.8
CLCN3-207ENST00000511092 ZNF687Q8N1G0 1237 aa10.03□□□□□ -0.8
CLCN3-207ENST00000511092 LRRC37A3O60309 1634 aa10.03□□□□□ -0.8
CLCN3-207ENST00000511092 SZT2Q5T011 3432 aa10.02□□□□□ -0.81
CLCN3-207ENST00000511092 AKAP12Q02952 1782 aa10.02□□□□□ -0.81
CLCN3-207ENST00000511092 ZNF316A6NFI3 1004 aaPredicted RBP10.02□□□□□ -0.81
CLCN3-207ENST00000511092 KCPQ6ZWJ8 1503 aa10.02□□□□□ -0.81
CLCN3-207ENST00000511092 PDE4AP27815 886 aa10.01□□□□□ -0.81
CLCN3-207ENST00000511092 HABP4Q5JVS0 413 aaKnown RBP10.01□□□□□ -0.81
CLCN3-207ENST00000511092 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
CLCN3-207ENST00000511092 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
CLCN3-207ENST00000511092 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
CLCN3-207ENST00000511092 PLPP6Q8IY26 295 aa10□□□□□ -0.81
CLCN3-207ENST00000511092 AIDAQ96BJ3 306 aa10□□□□□ -0.81
CLCN3-207ENST00000511092 ROBO2Q9HCK4 1378 aa10□□□□□ -0.81
CLCN3-207ENST00000511092 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 OVOS2A0A0J9YW53 1432 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 OVOS2Q6IE36 1432 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 ATP7BP35670 1465 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 DSG2Q14126 1118 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 SLC17A8Q8NDX2 589 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 PMFBP1Q8TBY8 1022 aa9.99□□□□□ -0.81
CLCN3-207ENST00000511092 KHSRPQ92945 711 aaKnown RBP eCLIP9.99□□□□□ -0.815e-7■■■□□ 16.5
CLCN3-207ENST00000511092 PXDNLA1KZ92 1463 aa9.98□□□□□ -0.81
CLCN3-207ENST00000511092 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLCN3-207ENST00000511092 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
CLCN3-207ENST00000511092 CRISPLD2Q9H0B8 497 aa9.98□□□□□ -0.81
CLCN3-207ENST00000511092 LRPPRCP42704 1394 aaKnown RBP9.98□□□□□ -0.81
CLCN3-207ENST00000511092 COL6A3P12111 3177 aa9.98□□□□□ -0.81
CLCN3-207ENST00000511092 FXR1P51114 621 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLCN3-207ENST00000511092 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
CLCN3-207ENST00000511092 SMC1BQ8NDV3 1235 aa9.97□□□□□ -0.81
CLCN3-207ENST00000511092 CASP8AP2Q9UKL3 1982 aa9.97□□□□□ -0.81
CLCN3-207ENST00000511092 C10orf71Q711Q0 1435 aa9.97□□□□□ -0.81
CLCN3-207ENST00000511092 WNK3Q9BYP7 1800 aa9.96□□□□□ -0.81
CLCN3-207ENST00000511092 NUDT7P0C024 238 aa9.96□□□□□ -0.82
CLCN3-207ENST00000511092 SOX10P56693 466 aa9.96□□□□□ -0.82
CLCN3-207ENST00000511092 KRT28Q7Z3Y7 464 aa9.96□□□□□ -0.82
CLCN3-207ENST00000511092 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
CLCN3-207ENST00000511092 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
CLCN3-207ENST00000511092 SLC52A1Q9NWF4 448 aa9.96□□□□□ -0.82
CLCN3-207ENST00000511092 ALS2Q96Q42 1657 aa9.96□□□□□ -0.82
CLCN3-207ENST00000511092 TRPM3Q9HCF6 1732 aaPredicted RBP9.96□□□□□ -0.82
CLCN3-207ENST00000511092 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
CLCN3-207ENST00000511092 MEGF6O75095 1541 aa9.95□□□□□ -0.82
CLCN3-207ENST00000511092 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
CLCN3-207ENST00000511092 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
CLCN3-207ENST00000511092 PPP1R15BQ5SWA1 713 aa9.94□□□□□ -0.82
CLCN3-207ENST00000511092 WBP1LQ9NX94 342 aa9.94□□□□□ -0.82
CLCN3-207ENST00000511092 EEA1Q15075 1411 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms