RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 ABCB7O75027 752 aa13.78□□□□□ -0.2
DHFR-205ENST00000511032 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
DHFR-205ENST00000511032 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
DHFR-205ENST00000511032 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
DHFR-205ENST00000511032 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
DHFR-205ENST00000511032 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
DHFR-205ENST00000511032 PLEKHG2Q9H7P9 1386 aa13.78□□□□□ -0.2
DHFR-205ENST00000511032 CAMTA1Q9Y6Y1 1673 aa13.77□□□□□ -0.2
DHFR-205ENST00000511032 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
DHFR-205ENST00000511032 ABCA3Q99758 1704 aa13.77□□□□□ -0.21
DHFR-205ENST00000511032 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
DHFR-205ENST00000511032 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
DHFR-205ENST00000511032 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 PPP4R2Q9NY27 417 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
DHFR-205ENST00000511032 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
DHFR-205ENST00000511032 COL18A1P39060 1754 aa13.75□□□□□ -0.21
DHFR-205ENST00000511032 MTHFSDQ2M296 383 aaKnown RBP13.75□□□□□ -0.21
DHFR-205ENST00000511032 MS4A1P11836 297 aa13.74□□□□□ -0.21
DHFR-205ENST00000511032 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
DHFR-205ENST00000511032 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
DHFR-205ENST00000511032 PHLPP1O60346 1717 aa13.74□□□□□ -0.21
DHFR-205ENST00000511032 RGPD2P0DJD1 1756 aa13.74□□□□□ -0.21
DHFR-205ENST00000511032 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
DHFR-205ENST00000511032 USHBP1Q8N6Y0 703 aa13.74□□□□□ -0.21
DHFR-205ENST00000511032 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
DHFR-205ENST00000511032 COL22A1Q8NFW1 1626 aaPredicted RBP13.73□□□□□ -0.21
DHFR-205ENST00000511032 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
DHFR-205ENST00000511032 CHRNA2Q15822 529 aa13.73□□□□□ -0.21
DHFR-205ENST00000511032 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
DHFR-205ENST00000511032 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
DHFR-205ENST00000511032 UBAP1LF5GYI3 381 aa13.72□□□□□ -0.21
DHFR-205ENST00000511032 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
DHFR-205ENST00000511032 EVA1CP58658 441 aa13.72□□□□□ -0.21
DHFR-205ENST00000511032 AKAP4Q5JQC9 854 aa13.72□□□□□ -0.21
DHFR-205ENST00000511032 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
DHFR-205ENST00000511032 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
DHFR-205ENST00000511032 ZNF853P0CG23 659 aa13.71□□□□□ -0.21
DHFR-205ENST00000511032 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.21
DHFR-205ENST00000511032 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
DHFR-205ENST00000511032 MCM10Q7L590 875 aa13.71□□□□□ -0.21
DHFR-205ENST00000511032 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.21
DHFR-205ENST00000511032 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
DHFR-205ENST00000511032 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.22
DHFR-205ENST00000511032 KIF16BQ96L93 1317 aa13.71□□□□□ -0.22
DHFR-205ENST00000511032 PIP4K2BP78356 416 aa13.7□□□□□ -0.22
DHFR-205ENST00000511032 DCTN1Q14203 1278 aa13.7□□□□□ -0.22
DHFR-205ENST00000511032 CHMP4AQ9BY43 222 aa13.7□□□□□ -0.22
DHFR-205ENST00000511032 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
DHFR-205ENST00000511032 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
DHFR-205ENST00000511032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.227e-43■■□□□ 14
DHFR-205ENST00000511032 COL14A1Q05707 1796 aaKnown RBP13.7□□□□□ -0.22
DHFR-205ENST00000511032 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
DHFR-205ENST00000511032 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
DHFR-205ENST00000511032 PDE3AQ14432 1141 aa13.69□□□□□ -0.22
DHFR-205ENST00000511032 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
DHFR-205ENST00000511032 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
DHFR-205ENST00000511032 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
DHFR-205ENST00000511032 CHL1O00533 1208 aa13.68□□□□□ -0.22
DHFR-205ENST00000511032 TEFQ10587 303 aa13.68□□□□□ -0.22
DHFR-205ENST00000511032 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
DHFR-205ENST00000511032 COL5A2P05997 1499 aaPredicted RBP13.68□□□□□ -0.22
DHFR-205ENST00000511032 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
DHFR-205ENST00000511032 PARP4Q9UKK3 1724 aaKnown RBP13.68□□□□□ -0.22
DHFR-205ENST00000511032 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
DHFR-205ENST00000511032 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
DHFR-205ENST00000511032 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
DHFR-205ENST00000511032 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
DHFR-205ENST00000511032 CCDC136Q96JN2 1154 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 CRB1P82279 1406 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 PLIN1O60240 522 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 BCAR3O75815 825 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 AAMPQ13685 434 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
DHFR-205ENST00000511032 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
DHFR-205ENST00000511032 IFNL2Q8IZJ0 200 aa13.65□□□□□ -0.22
DHFR-205ENST00000511032 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
DHFR-205ENST00000511032 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
DHFR-205ENST00000511032 CERKQ8TCT0 537 aa13.64□□□□□ -0.23
DHFR-205ENST00000511032 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
DHFR-205ENST00000511032 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
DHFR-205ENST00000511032 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
DHFR-205ENST00000511032 VAMP4O75379 141 aa13.63□□□□□ -0.23
DHFR-205ENST00000511032 BRPF1P55201 1214 aaPredicted RBP13.63□□□□□ -0.23
DHFR-205ENST00000511032 IL17REQ8NFR9 667 aa13.63□□□□□ -0.23
DHFR-205ENST00000511032 SSH1Q8WYL5 1049 aa13.63□□□□□ -0.23
DHFR-205ENST00000511032 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
DHFR-205ENST00000511032 IL2RBP14784 551 aa13.62□□□□□ -0.23
DHFR-205ENST00000511032 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
DHFR-205ENST00000511032 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
DHFR-205ENST00000511032 PCDH11XQ9BZA7 1347 aa13.62□□□□□ -0.23
DHFR-205ENST00000511032 PCDH11YQ9BZA8 1340 aa13.62□□□□□ -0.23
DHFR-205ENST00000511032 MEGF6O75095 1541 aa13.62□□□□□ -0.23
DHFR-205ENST00000511032 RNMTO43148 476 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms