RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 KCNQ4P56696 695 aa12.03□□□□□ -0.48
PDGFC-206ENST00000510982 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
PDGFC-206ENST00000510982 PIAS4Q8N2W9 510 aaPredicted RBP12.03□□□□□ -0.48
PDGFC-206ENST00000510982 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
PDGFC-206ENST00000510982 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
PDGFC-206ENST00000510982 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
PDGFC-206ENST00000510982 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
PDGFC-206ENST00000510982 POLR3GLQ9BT43 218 aa12.02□□□□□ -0.49
PDGFC-206ENST00000510982 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
PDGFC-206ENST00000510982 CGNL1Q0VF96 1302 aa12.02□□□□□ -0.49
PDGFC-206ENST00000510982 RTL1A6NKG5 1358 aa12.02□□□□□ -0.49
PDGFC-206ENST00000510982 CASZ1Q86V15 1759 aa12.02□□□□□ -0.49
PDGFC-206ENST00000510982 ARXQ96QS3 562 aa12.01□□□□□ -0.49
PDGFC-206ENST00000510982 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
PDGFC-206ENST00000510982 BTAF1O14981 1849 aa12.01□□□□□ -0.49
PDGFC-206ENST00000510982 INSRP06213 1382 aa12.01□□□□□ -0.49
PDGFC-206ENST00000510982 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
PDGFC-206ENST00000510982 SLC16A10Q8TF71 515 aa12□□□□□ -0.49
PDGFC-206ENST00000510982 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
PDGFC-206ENST00000510982 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
PDGFC-206ENST00000510982 MEGF6O75095 1541 aa12□□□□□ -0.49
PDGFC-206ENST00000510982 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
PDGFC-206ENST00000510982 RGPD2P0DJD1 1756 aa12□□□□□ -0.49
PDGFC-206ENST00000510982 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
PDGFC-206ENST00000510982 FLT4P35916 1363 aa11.99□□□□□ -0.49
PDGFC-206ENST00000510982 NSD3Q9BZ95 1437 aa11.99□□□□□ -0.49
PDGFC-206ENST00000510982 KIF24Q5T7B8 1368 aa11.98□□□□□ -0.49
PDGFC-206ENST00000510982 POLD1P28340 1107 aa11.98□□□□□ -0.49
PDGFC-206ENST00000510982 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
PDGFC-206ENST00000510982 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
PDGFC-206ENST00000510982 PCDH11XQ9BZA7 1347 aa11.97□□□□□ -0.49
PDGFC-206ENST00000510982 PCDH11YQ9BZA8 1340 aa11.97□□□□□ -0.49
PDGFC-206ENST00000510982 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
PDGFC-206ENST00000510982 NSD2O96028 1365 aa11.96□□□□□ -0.49
PDGFC-206ENST00000510982 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
PDGFC-206ENST00000510982 CYP27B1O15528 508 aa11.96□□□□□ -0.49
PDGFC-206ENST00000510982 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.49
PDGFC-206ENST00000510982 MYOM1P52179 1685 aa11.95□□□□□ -0.5
PDGFC-206ENST00000510982 HMGB2P26583 209 aaKnown RBP11.95□□□□□ -0.5
PDGFC-206ENST00000510982 TNNT2P45379 298 aaPredicted RBP11.95□□□□□ -0.5
PDGFC-206ENST00000510982 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
PDGFC-206ENST00000510982 EYA1Q99502 592 aa11.95□□□□□ -0.5
PDGFC-206ENST00000510982 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
PDGFC-206ENST00000510982 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
PDGFC-206ENST00000510982 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
PDGFC-206ENST00000510982 GPR162Q16538 588 aa11.94□□□□□ -0.5
PDGFC-206ENST00000510982 COL23A1Q86Y22 540 aaPredicted RBP11.94□□□□□ -0.5
PDGFC-206ENST00000510982 KIF20BQ96Q89 1820 aa11.93□□□□□ -0.5
PDGFC-206ENST00000510982 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
PDGFC-206ENST00000510982 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
PDGFC-206ENST00000510982 PANK3Q9H999 370 aa11.93□□□□□ -0.5
PDGFC-206ENST00000510982 DOT1LQ8TEK3 1739 aa11.93□□□□□ -0.5
PDGFC-206ENST00000510982 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
PDGFC-206ENST00000510982 PIGBQ92521 554 aa11.92□□□□□ -0.5
PDGFC-206ENST00000510982 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
PDGFC-206ENST00000510982 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
PDGFC-206ENST00000510982 MAP2P11137 1827 aaKnown RBP11.91□□□□□ -0.5
PDGFC-206ENST00000510982 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
PDGFC-206ENST00000510982 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
PDGFC-206ENST00000510982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
PDGFC-206ENST00000510982 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
PDGFC-206ENST00000510982 LY75O60449 1722 aa11.9□□□□□ -0.5
PDGFC-206ENST00000510982 EIF4A2Q14240 407 aaKnown RBP11.9□□□□□ -0.5
PDGFC-206ENST00000510982 MSL1Q68DK7 614 aa11.9□□□□□ -0.5
PDGFC-206ENST00000510982 IFNL2Q8IZJ0 200 aa11.9□□□□□ -0.5
PDGFC-206ENST00000510982 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
PDGFC-206ENST00000510982 AK7Q96M32 723 aa11.89□□□□□ -0.51
PDGFC-206ENST00000510982 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
PDGFC-206ENST00000510982 PHKG2P15735 406 aa11.88□□□□□ -0.51
PDGFC-206ENST00000510982 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
PDGFC-206ENST00000510982 NLGN2Q8NFZ4 835 aa11.88□□□□□ -0.51
PDGFC-206ENST00000510982 QSER1Q2KHR3 1735 aa11.87□□□□□ -0.51
PDGFC-206ENST00000510982 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
PDGFC-206ENST00000510982 PHF14O94880 888 aa11.87□□□□□ -0.51
PDGFC-206ENST00000510982 SIK1P57059 783 aa11.87□□□□□ -0.51
PDGFC-206ENST00000510982 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
PDGFC-206ENST00000510982 KNSTRNQ9Y448 316 aa11.87□□□□□ -0.51
PDGFC-206ENST00000510982 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
PDGFC-206ENST00000510982 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
PDGFC-206ENST00000510982 PLEKHO1Q53GL0 409 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-206ENST00000510982 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
PDGFC-206ENST00000510982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
PDGFC-206ENST00000510982 LINC00116Q8NCU8 138 aa11.85□□□□□ -0.51
PDGFC-206ENST00000510982 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
PDGFC-206ENST00000510982 ITGB4P16144 1822 aa11.85□□□□□ -0.51
PDGFC-206ENST00000510982 TUBGCP6Q96RT7 1819 aa11.85□□□□□ -0.51
PDGFC-206ENST00000510982 CHD4Q14839 1912 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 ERVV-2B6SEH9 535 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 GRIN3BO60391 1043 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
PDGFC-206ENST00000510982 ITPK1Q13572 414 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 AMOTQ4VCS5 1084 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 IGSF1Q8N6C5 1336 aa11.84□□□□□ -0.51
PDGFC-206ENST00000510982 GNPATO15228 680 aa11.83□□□□□ -0.52
PDGFC-206ENST00000510982 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDGFC-206ENST00000510982 SSFA2P28290 1259 aa11.83□□□□□ -0.52
PDGFC-206ENST00000510982 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
PDGFC-206ENST00000510982 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms