RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 SIX5Q8N196 739 aa7.19□□□□□ -1.26
SMAD1-208ENST00000510948 MROH2BQ7Z745 1585 aa7.19□□□□□ -1.26
SMAD1-208ENST00000510948 SEC13P55735 322 aa7.18□□□□□ -1.26
SMAD1-208ENST00000510948 KCNC4Q03721 635 aa7.18□□□□□ -1.26
SMAD1-208ENST00000510948 KIAA1024Q9UPX6 916 aa7.18□□□□□ -1.26
SMAD1-208ENST00000510948 RBM19Q9Y4C8 960 aaKnown RBP7.18□□□□□ -1.26
SMAD1-208ENST00000510948 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
SMAD1-208ENST00000510948 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
SMAD1-208ENST00000510948 FOXD4L5Q5VV16 416 aaPredicted RBP7.17□□□□□ -1.26
SMAD1-208ENST00000510948 CCDC102BQ68D86 513 aa7.17□□□□□ -1.26
SMAD1-208ENST00000510948 FOXD4L4Q8WXT5 416 aaPredicted RBP7.17□□□□□ -1.26
SMAD1-208ENST00000510948 PCDHB11Q9Y5F2 797 aa7.17□□□□□ -1.26
SMAD1-208ENST00000510948 RSF1Q96T23 1441 aaPredicted RBP7.17□□□□□ -1.26
SMAD1-208ENST00000510948 RNF223E7ERA6 249 aa7.16□□□□□ -1.26
SMAD1-208ENST00000510948 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
SMAD1-208ENST00000510948 ANKLE1Q8NAG6 615 aa7.16□□□□□ -1.26
SMAD1-208ENST00000510948 KCTD15Q96SI1 283 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-208ENST00000510948 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
SMAD1-208ENST00000510948 WIZO95785 1651 aa7.16□□□□□ -1.26
SMAD1-208ENST00000510948 GGCXP38435 758 aa7.15□□□□□ -1.26
SMAD1-208ENST00000510948 WNT7BP56706 349 aa7.15□□□□□ -1.26
SMAD1-208ENST00000510948 PSME1Q06323 249 aa7.15□□□□□ -1.26
SMAD1-208ENST00000510948 TRIM32Q13049 653 aa7.15□□□□□ -1.26
SMAD1-208ENST00000510948 TPCN2Q8NHX9 752 aa7.15□□□□□ -1.26
SMAD1-208ENST00000510948 C1orf216Q8TAB5 229 aa7.15□□□□□ -1.26
SMAD1-208ENST00000510948 SFI1A8K8P3 1242 aa7.14□□□□□ -1.27
SMAD1-208ENST00000510948 ITGBL1O95965 494 aaPredicted RBP7.14□□□□□ -1.27
SMAD1-208ENST00000510948 EIF4G1Q04637 1599 aaKnown RBP7.14□□□□□ -1.27
SMAD1-208ENST00000510948 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
SMAD1-208ENST00000510948 MAP4K5Q9Y4K4 846 aa7.14□□□□□ -1.27
SMAD1-208ENST00000510948 PRMT3O60678 531 aa7.13□□□□□ -1.27
SMAD1-208ENST00000510948 MYCP01106 439 aaPredicted RBP7.13□□□□□ -1.27
SMAD1-208ENST00000510948 RPIAP49247 311 aa7.13□□□□□ -1.27
SMAD1-208ENST00000510948 SKOR1P84550 965 aa7.13□□□□□ -1.27
SMAD1-208ENST00000510948 PLA2G2CQ5R387 149 aa7.13□□□□□ -1.27
SMAD1-208ENST00000510948 VASH1Q7L8A9 365 aaPredicted RBP7.13□□□□□ -1.27
SMAD1-208ENST00000510948 TAS1R3Q7RTX0 852 aa7.13□□□□□ -1.27
SMAD1-208ENST00000510948 ERVH48-1M5A8F1 160 aa7.12□□□□□ -1.27
SMAD1-208ENST00000510948 RAB15P59190 212 aa7.12□□□□□ -1.27
SMAD1-208ENST00000510948 OCLNQ16625 522 aa7.12□□□□□ -1.27
SMAD1-208ENST00000510948 INTS6LQ5JSJ4 861 aaKnown RBP7.12□□□□□ -1.27
SMAD1-208ENST00000510948 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
SMAD1-208ENST00000510948 HINFPQ9BQA5 517 aa7.12□□□□□ -1.27
SMAD1-208ENST00000510948 CXXC1Q9P0U4 656 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-208ENST00000510948 AMOTL2Q9Y2J4 779 aa7.12□□□□□ -1.27
SMAD1-208ENST00000510948 SOWAHDA6NJG2 315 aa7.11□□□□□ -1.27
SMAD1-208ENST00000510948 M0R2N6 131 aa7.11□□□□□ -1.27
SMAD1-208ENST00000510948 CD2BP2O95400 341 aaKnown RBP7.11□□□□□ -1.27
SMAD1-208ENST00000510948 TRIM52Q96A61 297 aa7.11□□□□□ -1.27
SMAD1-208ENST00000510948 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
SMAD1-208ENST00000510948 ESF1Q9H501 851 aaKnown RBP7.11□□□□□ -1.27
SMAD1-208ENST00000510948 SCNN1AP37088 669 aa7.1□□□□□ -1.27
SMAD1-208ENST00000510948 SERPINB4P48594 390 aa7.1□□□□□ -1.27
SMAD1-208ENST00000510948 PPP1R18Q6NYC8 613 aa7.1□□□□□ -1.27
SMAD1-208ENST00000510948 EHBP1Q8NDI1 1231 aa7.1□□□□□ -1.27
SMAD1-208ENST00000510948 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.1□□□□□ -1.27
SMAD1-208ENST00000510948 TOP2AP11388 1531 aaKnown RBP7.1□□□□□ -1.27
SMAD1-208ENST00000510948 GRM5P41594 1212 aa7.09□□□□□ -1.27
SMAD1-208ENST00000510948 SCTRP47872 440 aa7.09□□□□□ -1.27
SMAD1-208ENST00000510948 RBM25P49756 843 aaKnown RBP7.09□□□□□ -1.27
SMAD1-208ENST00000510948 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
SMAD1-208ENST00000510948 ARID5BQ14865 1188 aa7.09□□□□□ -1.27
SMAD1-208ENST00000510948 RC3H1Q5TC82 1133 aaKnown RBP7.09□□□□□ -1.27
SMAD1-208ENST00000510948 CC2D2BQ6DHV5 1058 aa7.09□□□□□ -1.27
SMAD1-208ENST00000510948 MPNDQ8N594 471 aa7.09□□□□□ -1.27
SMAD1-208ENST00000510948 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMAD1-208ENST00000510948 TSEN2Q8NCE0 465 aaKnown RBP7.09□□□□□ -1.27
SMAD1-208ENST00000510948 RNF166Q96A37 237 aaPredicted RBP7.09□□□□□ -1.27
SMAD1-208ENST00000510948 SMARCA2P51531 1590 aa7.08□□□□□ -1.28
SMAD1-208ENST00000510948 LGR5O75473 907 aa7.08□□□□□ -1.28
SMAD1-208ENST00000510948 WEE1P30291 646 aa7.08□□□□□ -1.28
SMAD1-208ENST00000510948 DHX9Q08211 1270 aaKnown RBP7.08□□□□□ -1.28
SMAD1-208ENST00000510948 ZNF428Q96B54 188 aa7.08□□□□□ -1.28
SMAD1-208ENST00000510948 ZNF358Q9NW07 568 aa7.07□□□□□ -1.28
SMAD1-208ENST00000510948 EGFL7Q9UHF1 273 aa7.07□□□□□ -1.28
SMAD1-208ENST00000510948 HMGXB3Q12766 1538 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 TMEM229AB2RXF0 380 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 BACH1O14867 736 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 SIAH2O43255 324 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 ERCC3P19447 782 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 OSBPL3Q9H4L5 887 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 TMPRSS4Q9NRS4 437 aa7.06□□□□□ -1.28
SMAD1-208ENST00000510948 BIN2Q9UBW5 565 aaPredicted RBP7.06□□□□□ -1.28
SMAD1-208ENST00000510948 E9PSI1 815 aa7.05□□□□□ -1.28
SMAD1-208ENST00000510948 PTCD1O75127 700 aaKnown RBP7.05□□□□□ -1.28
SMAD1-208ENST00000510948 ABL1P00519 1130 aa7.05□□□□□ -1.28
SMAD1-208ENST00000510948 FSHRP23945 695 aa7.05□□□□□ -1.28
SMAD1-208ENST00000510948 LIAT1Q6ZQX7 453 aa7.05□□□□□ -1.28
SMAD1-208ENST00000510948 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 WASLO00401 505 aaPredicted RBP7.04□□□□□ -1.28
SMAD1-208ENST00000510948 ICMTO60725 284 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 IGFBP4P22692 258 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 SCNN1DP51172 638 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 GDF10P55107 478 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 MARSP56192 900 aaKnown RBP7.04□□□□□ -1.28
SMAD1-208ENST00000510948 NR5A1Q13285 461 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
SMAD1-208ENST00000510948 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
SMAD1-208ENST00000510948 CYLDQ9NQC7 956 aa7.04□□□□□ -1.28
SMAD1-208ENST00000510948 CC2D2AQ9P2K1 1620 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms