RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PRICKLE2Q7Z3G6 844 aa15.32■□□□□ 0.04
USP53-206ENST00000510737 A0A1W2PRU2 124 aa15.31■□□□□ 0.04
USP53-206ENST00000510737 CDC14CA4D256 554 aa15.31■□□□□ 0.04
USP53-206ENST00000510737 RHOQP17081 205 aa15.31■□□□□ 0.04
USP53-206ENST00000510737 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
USP53-206ENST00000510737 SV2AQ7L0J3 742 aa15.29■□□□□ 0.04
USP53-206ENST00000510737 MEN1O00255 615 aa15.28■□□□□ 0.04
USP53-206ENST00000510737 OSBPL3Q9H4L5 887 aa15.28■□□□□ 0.04
USP53-206ENST00000510737 PCDHB11Q9Y5F2 797 aa15.28■□□□□ 0.04
USP53-206ENST00000510737 RNF20Q5VTR2 975 aa15.27■□□□□ 0.04
USP53-206ENST00000510737 TBC1D2BQ9UPU7 963 aa15.27■□□□□ 0.04
USP53-206ENST00000510737 TRAK2O60296 914 aa15.26■□□□□ 0.03
USP53-206ENST00000510737 MCCD1P59942 119 aaPredicted RBP15.26■□□□□ 0.03
USP53-206ENST00000510737 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
USP53-206ENST00000510737 WHAMMQ8TF30 809 aa15.25■□□□□ 0.03
USP53-206ENST00000510737 ZNF385CQ66K41 422 aaPredicted RBP15.24■□□□□ 0.03
USP53-206ENST00000510737 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
USP53-206ENST00000510737 GPC1P35052 558 aa15.23■□□□□ 0.03
USP53-206ENST00000510737 GSK3AP49840 483 aa15.23■□□□□ 0.03
USP53-206ENST00000510737 CDCA7Q9BWT1 371 aaPredicted RBP15.23■□□□□ 0.03
USP53-206ENST00000510737 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
USP53-206ENST00000510737 IRF5Q13568 498 aa15.22■□□□□ 0.03
USP53-206ENST00000510737 GAS6Q14393 721 aa15.22■□□□□ 0.03
USP53-206ENST00000510737 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
USP53-206ENST00000510737 GRIP2Q9C0E4 1043 aa15.21■□□□□ 0.03
USP53-206ENST00000510737 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.03
USP53-206ENST00000510737 ZNF330Q9Y3S2 320 aaPredicted RBP15.21■□□□□ 0.03
USP53-206ENST00000510737 POU4F2Q12837 409 aa15.2■□□□□ 0.02
USP53-206ENST00000510737 CLN3Q13286 438 aa15.2■□□□□ 0.02
USP53-206ENST00000510737 CYP2U1Q7Z449 544 aa15.2■□□□□ 0.02
USP53-206ENST00000510737 TSGA10IPQ3SY00 556 aa15.19■□□□□ 0.02
USP53-206ENST00000510737 RAB6BQ9NRW1 208 aa15.19■□□□□ 0.02
USP53-206ENST00000510737 TRIM52Q96A61 297 aa15.18■□□□□ 0.02
USP53-206ENST00000510737 ZNF837Q96EG3 531 aaPredicted RBP15.18■□□□□ 0.02
USP53-206ENST00000510737 APBB1O00213 710 aa15.17■□□□□ 0.02
USP53-206ENST00000510737 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
USP53-206ENST00000510737 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
USP53-206ENST00000510737 DBN1Q16643 649 aa15.16■□□□□ 0.02
USP53-206ENST00000510737 ZNF592Q92610 1267 aa15.16■□□□□ 0.02
USP53-206ENST00000510737 NLRP3Q96P20 1036 aa15.16■□□□□ 0.02
USP53-206ENST00000510737 PHTF2Q8N3S3 785 aa15.15■□□□□ 0.02
USP53-206ENST00000510737 IL2RAP01589 272 aa15.14■□□□□ 0.01
USP53-206ENST00000510737 SLC27A3Q5K4L6 730 aa15.14■□□□□ 0.01
USP53-206ENST00000510737 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
USP53-206ENST00000510737 TRIM22Q8IYM9 498 aa15.14■□□□□ 0.01
USP53-206ENST00000510737 NBPF15Q8N660 670 aa15.14■□□□□ 0.01
USP53-206ENST00000510737 GPR25O00155 361 aa15.13■□□□□ 0.01
USP53-206ENST00000510737 ARHGEF15O94989 841 aa15.13■□□□□ 0.01
USP53-206ENST00000510737 KCNMA1Q12791 1236 aa15.13■□□□□ 0.01
USP53-206ENST00000510737 SVOPQ8N4V2 548 aa15.13■□□□□ 0.01
USP53-206ENST00000510737 DYRK1BQ9Y463 629 aa15.13■□□□□ 0.01
USP53-206ENST00000510737 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
USP53-206ENST00000510737 HRH3Q9Y5N1 445 aa15.12■□□□□ 0.01
USP53-206ENST00000510737 SPATA31C2B4DYI2 1134 aa15.11■□□□□ 0.01
USP53-206ENST00000510737 PRKCSHP14314 528 aaPredicted RBP15.11■□□□□ 0.01
USP53-206ENST00000510737 RIPOR1Q6ZS17 1223 aa15.11■□□□□ 0.01
USP53-206ENST00000510737 STAU1O95793 577 aaKnown RBP15.1■□□□□ 0.01
USP53-206ENST00000510737 LYPD4Q6UWN0 246 aa15.1■□□□□ 0.01
USP53-206ENST00000510737 CNKSR1Q969H4 720 aa15.1■□□□□ 0.01
USP53-206ENST00000510737 GNRH1P01148 92 aa15.09■□□□□ 0.01
USP53-206ENST00000510737 VAC14Q08AM6 782 aa15.09■□□□□ 0.01
USP53-206ENST00000510737 GAS2L1Q99501 681 aaPredicted RBP15.09■□□□□ 0.01
USP53-206ENST00000510737 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
USP53-206ENST00000510737 ESYT1Q9BSJ8 1104 aa15.08■□□□□ 0
USP53-206ENST00000510737 THBS1P07996 1170 aa15.07■□□□□ 0
USP53-206ENST00000510737 CENPCQ03188 943 aa15.07■□□□□ 0
USP53-206ENST00000510737 SRSF11Q05519 484 aaKnown RBP15.07■□□□□ 0
USP53-206ENST00000510737 WASLO00401 505 aaPredicted RBP15.06■□□□□ 0
USP53-206ENST00000510737 GTPBP3Q969Y2 492 aaKnown RBP15.06■□□□□ 0
USP53-206ENST00000510737 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
USP53-206ENST00000510737 XAGE2Q96GT9 111 aa15.05■□□□□ -0
USP53-206ENST00000510737 GMCL1Q96IK5 515 aa15.05■□□□□ -0
USP53-206ENST00000510737 FHDC1Q9C0D6 1143 aaPredicted RBP15.05■□□□□ -0
USP53-206ENST00000510737 ESF1Q9H501 851 aaKnown RBP15.05■□□□□ -0
USP53-206ENST00000510737 WDR44Q5JSH3 913 aa15.04■□□□□ -0
USP53-206ENST00000510737 TAS1R3Q7RTX0 852 aa15.04■□□□□ -0
USP53-206ENST00000510737 TIMMDC1Q9NPL8 285 aa15.04■□□□□ -0
USP53-206ENST00000510737 CHIC2Q9UKJ5 165 aa15.04■□□□□ -0
USP53-206ENST00000510737 MYCP01106 439 aaPredicted RBP15.03■□□□□ -0
USP53-206ENST00000510737 DOLKQ9UPQ8 538 aa15.02■□□□□ -0
USP53-206ENST00000510737 CELA2BP08218 269 aaPredicted RBP15.01□□□□□ -0.01
USP53-206ENST00000510737 ABL2P42684 1182 aa15.01□□□□□ -0.01
USP53-206ENST00000510737 PHKA2P46019 1235 aa15.01□□□□□ -0.01
USP53-206ENST00000510737 RASSF7Q02833 373 aa15.01□□□□□ -0.01
USP53-206ENST00000510737 MBIPQ9NS73 344 aa15.01□□□□□ -0.01
USP53-206ENST00000510737 MCM6Q14566 821 aa15□□□□□ -0.01
USP53-206ENST00000510737 RNF135Q8IUD6 432 aa15□□□□□ -0.01
USP53-206ENST00000510737 ETNK1Q9HBU6 452 aa15□□□□□ -0.01
USP53-206ENST00000510737 PRM3Q9NNZ6 103 aa15□□□□□ -0.01
USP53-206ENST00000510737 F11P03951 625 aa14.99□□□□□ -0.01
USP53-206ENST00000510737 SLFNL1Q499Z3 407 aa14.99□□□□□ -0.01
USP53-206ENST00000510737 KCTD17Q8N5Z5 321 aa14.99□□□□□ -0.01
USP53-206ENST00000510737 IGF1RP08069 1367 aa14.98□□□□□ -0.01
USP53-206ENST00000510737 H7C1W4 665 aa14.98□□□□□ -0.01
USP53-206ENST00000510737 ZSCAN10Q96SZ4 725 aaPredicted RBP14.98□□□□□ -0.01
USP53-206ENST00000510737 OXLD1Q5BKU9 147 aa14.97□□□□□ -0.01
USP53-206ENST00000510737 NUCKS1Q9H1E3 243 aaKnown RBP14.97□□□□□ -0.01
USP53-206ENST00000510737 C4orf17Q53FE4 359 aa14.96□□□□□ -0.01
USP53-206ENST00000510737 GPAMQ9HCL2 828 aa14.96□□□□□ -0.01
USP53-206ENST00000510737 GDF11O95390 407 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms