RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 UTRNP46939 3433 aa11.48□□□□□ -0.57
NFKB1-209ENST00000510638 CRYBG1Q9Y4K1 1723 aa11.47□□□□□ -0.57
NFKB1-209ENST00000510638 IGSF1Q8N6C5 1336 aa11.47□□□□□ -0.57
NFKB1-209ENST00000510638 EYA1Q99502 592 aa11.47□□□□□ -0.57
NFKB1-209ENST00000510638 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.57
NFKB1-209ENST00000510638 KCNQ2O43526 872 aa11.46□□□□□ -0.57
NFKB1-209ENST00000510638 HMOX1P09601 288 aa11.46□□□□□ -0.57
NFKB1-209ENST00000510638 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
NFKB1-209ENST00000510638 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.57
NFKB1-209ENST00000510638 PEAK1Q9H792 1746 aa11.46□□□□□ -0.58
NFKB1-209ENST00000510638 COL5A2P05997 1499 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-209ENST00000510638 NBPF14Q5TI25 921 aa11.45□□□□□ -0.58
NFKB1-209ENST00000510638 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
NFKB1-209ENST00000510638 LARP1Q6PKG0 1096 aaKnown RBP11.45□□□□□ -0.58
NFKB1-209ENST00000510638 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
NFKB1-209ENST00000510638 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
NFKB1-209ENST00000510638 CAMKK2Q96RR4 588 aa11.45□□□□□ -0.58
NFKB1-209ENST00000510638 CARD10Q9BWT7 1032 aa11.45□□□□□ -0.58
NFKB1-209ENST00000510638 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
NFKB1-209ENST00000510638 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
NFKB1-209ENST00000510638 A0A0G2JS52 829 aa11.44□□□□□ -0.58
NFKB1-209ENST00000510638 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
NFKB1-209ENST00000510638 PRKAR2BP31323 418 aa11.44□□□□□ -0.58
NFKB1-209ENST00000510638 MYT1Q01538 1121 aa11.44□□□□□ -0.58
NFKB1-209ENST00000510638 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
NFKB1-209ENST00000510638 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
NFKB1-209ENST00000510638 CRB1P82279 1406 aa11.43□□□□□ -0.58
NFKB1-209ENST00000510638 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
NFKB1-209ENST00000510638 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
NFKB1-209ENST00000510638 MAP2P11137 1827 aaKnown RBP11.43□□□□□ -0.58
NFKB1-209ENST00000510638 LTN1O94822 1766 aa11.43□□□□□ -0.58
NFKB1-209ENST00000510638 KDRP35968 1356 aa11.42□□□□□ -0.58
NFKB1-209ENST00000510638 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
NFKB1-209ENST00000510638 CCDC146Q8IYE0 955 aa11.42□□□□□ -0.58
NFKB1-209ENST00000510638 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
NFKB1-209ENST00000510638 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
NFKB1-209ENST00000510638 THRAP3Q9Y2W1 955 aaKnown RBP11.42□□□□□ -0.58
NFKB1-209ENST00000510638 LMO7Q8WWI1 1683 aa11.42□□□□□ -0.58
NFKB1-209ENST00000510638 IL2RBP14784 551 aa11.41□□□□□ -0.58
NFKB1-209ENST00000510638 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
NFKB1-209ENST00000510638 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
NFKB1-209ENST00000510638 NGEFQ8N5V2 710 aa11.41□□□□□ -0.58
NFKB1-209ENST00000510638 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
NFKB1-209ENST00000510638 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
NFKB1-209ENST00000510638 HNRNPUQ00839 825 aaKnown RBP eCLIP11.4□□□□□ -0.58
NFKB1-209ENST00000510638 GAS2L2Q8NHY3 880 aa11.4□□□□□ -0.58
NFKB1-209ENST00000510638 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.58
NFKB1-209ENST00000510638 COL18A1P39060 1754 aa11.4□□□□□ -0.58
NFKB1-209ENST00000510638 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
NFKB1-209ENST00000510638 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
NFKB1-209ENST00000510638 SPATA31A1Q5TZJ5 1347 aa11.39□□□□□ -0.59
NFKB1-209ENST00000510638 SPATA31A5Q5VU36 1347 aa11.39□□□□□ -0.59
NFKB1-209ENST00000510638 SPATA31A7Q8IWB4 1347 aa11.39□□□□□ -0.59
NFKB1-209ENST00000510638 APAF1O14727 1248 aa11.39□□□□□ -0.59
NFKB1-209ENST00000510638 YTHDC1Q96MU7 727 aaKnown RBP11.39□□□□□ -0.59
NFKB1-209ENST00000510638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
NFKB1-209ENST00000510638 SPG7Q9UQ90 795 aa11.39□□□□□ -0.59
NFKB1-209ENST00000510638 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
NFKB1-209ENST00000510638 LMOD3Q0VAK6 560 aa11.38□□□□□ -0.59
NFKB1-209ENST00000510638 NFE2L2Q16236 605 aa11.38□□□□□ -0.59
NFKB1-209ENST00000510638 FAM98CQ17RN3 349 aaKnown RBP11.38□□□□□ -0.59
NFKB1-209ENST00000510638 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
NFKB1-209ENST00000510638 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
NFKB1-209ENST00000510638 TMPOP42166 694 aaKnown RBP11.37□□□□□ -0.59
NFKB1-209ENST00000510638 NEUROD2Q15784 382 aa11.37□□□□□ -0.59
NFKB1-209ENST00000510638 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
NFKB1-209ENST00000510638 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
NFKB1-209ENST00000510638 PHACTR3Q96KR7 559 aa11.37□□□□□ -0.59
NFKB1-209ENST00000510638 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
NFKB1-209ENST00000510638 APBA3O96018 575 aa11.36□□□□□ -0.59
NFKB1-209ENST00000510638 RIPK4P57078 832 aa11.36□□□□□ -0.59
NFKB1-209ENST00000510638 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
NFKB1-209ENST00000510638 ZCRB1Q8TBF4 217 aaKnown RBP11.36□□□□□ -0.59
NFKB1-209ENST00000510638 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
NFKB1-209ENST00000510638 EXOC5O00471 708 aa11.35□□□□□ -0.59
NFKB1-209ENST00000510638 TRIM37O94972 964 aa11.35□□□□□ -0.59
NFKB1-209ENST00000510638 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
NFKB1-209ENST00000510638 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
NFKB1-209ENST00000510638 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
NFKB1-209ENST00000510638 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
NFKB1-209ENST00000510638 OVOS2A0A0G2JMS6 1433 aa11.35□□□□□ -0.59
NFKB1-209ENST00000510638 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
NFKB1-209ENST00000510638 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
NFKB1-209ENST00000510638 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
NFKB1-209ENST00000510638 HTATSF1O43719 755 aaKnown RBP11.34□□□□□ -0.59
NFKB1-209ENST00000510638 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-209ENST00000510638 DDB1Q16531 1140 aa11.34□□□□□ -0.59
NFKB1-209ENST00000510638 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
NFKB1-209ENST00000510638 AKAP4Q5JQC9 854 aa11.34□□□□□ -0.59
NFKB1-209ENST00000510638 IFNL2Q8IZJ0 200 aa11.34□□□□□ -0.59
NFKB1-209ENST00000510638 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-209ENST00000510638 MEGF6O75095 1541 aa11.34□□□□□ -0.59
NFKB1-209ENST00000510638 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
NFKB1-209ENST00000510638 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
NFKB1-209ENST00000510638 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
NFKB1-209ENST00000510638 DDX54Q8TDD1 881 aaKnown RBP11.32□□□□□ -0.6
NFKB1-209ENST00000510638 PHKG2P15735 406 aa11.31□□□□□ -0.6
NFKB1-209ENST00000510638 PDE3BQ13370 1112 aa11.31□□□□□ -0.6
NFKB1-209ENST00000510638 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
NFKB1-209ENST00000510638 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms