RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PANK3Q9H999 370 aa31.67■■■□□ 2.66
SNF8-209ENST00000510558 TXNRD1Q16881 649 aa31.66■■■□□ 2.66
SNF8-209ENST00000510558 ZCRB1Q8TBF4 217 aaKnown RBP31.66■■■□□ 2.66
SNF8-209ENST00000510558 ANO8Q9HCE9 1232 aaPredicted RBP31.66■■■□□ 2.66
SNF8-209ENST00000510558 DOT1LQ8TEK3 1739 aa31.66■■■□□ 2.66
SNF8-209ENST00000510558 PPM1GO15355 546 aaPredicted RBP31.64■■■□□ 2.66
SNF8-209ENST00000510558 RAPGEF4Q8WZA2 1011 aa31.64■■■□□ 2.66
SNF8-209ENST00000510558 WASHC2AQ641Q2 1341 aa31.6■■■□□ 2.65
SNF8-209ENST00000510558 TATP17735 454 aaPredicted RBP31.6■■■□□ 2.65
SNF8-209ENST00000510558 POLKQ9UBT6 870 aa31.6■■■□□ 2.65
SNF8-209ENST00000510558 TNNT2P45379 298 aaPredicted RBP31.58■■■□□ 2.65
SNF8-209ENST00000510558 CASZ1Q86V15 1759 aa31.58■■■□□ 2.65
SNF8-209ENST00000510558 NSD2O96028 1365 aa31.57■■■□□ 2.64
SNF8-209ENST00000510558 NCAPD2Q15021 1401 aa31.57■■■□□ 2.64
SNF8-209ENST00000510558 PAPPAQ13219 1627 aa31.54■■■□□ 2.64
SNF8-209ENST00000510558 PRIM1P49642 420 aaKnown RBP31.54■■■□□ 2.64
SNF8-209ENST00000510558 SYTL4Q96C24 671 aaPredicted RBP31.54■■■□□ 2.64
SNF8-209ENST00000510558 STK32BQ9NY57 414 aa31.54■■■□□ 2.64
SNF8-209ENST00000510558 PKD1L3Q7Z443 1732 aa31.54■■■□□ 2.64
SNF8-209ENST00000510558 KIF7Q2M1P5 1343 aa31.53■■■□□ 2.64
SNF8-209ENST00000510558 PCDH11XQ9BZA7 1347 aa31.51■■■□□ 2.64
SNF8-209ENST00000510558 PCDH11YQ9BZA8 1340 aa31.51■■■□□ 2.64
SNF8-209ENST00000510558 SLC15A2Q16348 729 aa31.51■■■□□ 2.63
SNF8-209ENST00000510558 EYA1Q99502 592 aa31.5■■■□□ 2.63
SNF8-209ENST00000510558 SPON1Q9HCB6 807 aa31.5■■■□□ 2.63
SNF8-209ENST00000510558 KNSTRNQ9Y448 316 aa31.49■■■□□ 2.63
SNF8-209ENST00000510558 LY75O60449 1722 aa31.49■■■□□ 2.63
SNF8-209ENST00000510558 PDGFDQ9GZP0 370 aaPredicted RBP31.48■■■□□ 2.63
SNF8-209ENST00000510558 MORC1Q86VD1 984 aa31.47■■■□□ 2.63
SNF8-209ENST00000510558 EIF4A2Q14240 407 aaKnown RBP31.46■■■□□ 2.63
SNF8-209ENST00000510558 LRRC4BQ9NT99 713 aa31.46■■■□□ 2.63
SNF8-209ENST00000510558 CYP27B1O15528 508 aa31.45■■■□□ 2.63
SNF8-209ENST00000510558 SLC27A3Q5K4L6 730 aa31.44■■■□□ 2.62
SNF8-209ENST00000510558 TOGARAM1Q9Y4F4 1720 aa31.44■■■□□ 2.62
SNF8-209ENST00000510558 ITGB4P16144 1822 aa31.42■■■□□ 2.62
SNF8-209ENST00000510558 AMER1Q5JTC6 1135 aaPredicted RBP31.4■■■□□ 2.62
SNF8-209ENST00000510558 SPG7Q9UQ90 795 aa31.4■■■□□ 2.62
SNF8-209ENST00000510558 ZBTB7AO95365 584 aa31.39■■■□□ 2.62
SNF8-209ENST00000510558 ZNF827Q17R98 1081 aa31.39■■■□□ 2.62
SNF8-209ENST00000510558 PPP1R1BQ9UD71 204 aaPredicted RBP31.39■■■□□ 2.62
SNF8-209ENST00000510558 QSER1Q2KHR3 1735 aa31.38■■■□□ 2.61
SNF8-209ENST00000510558 IGSF1Q8N6C5 1336 aa31.38■■■□□ 2.61
SNF8-209ENST00000510558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.37■■■□□ 2.61
SNF8-209ENST00000510558 KCNQ4P56696 695 aa31.36■■■□□ 2.61
SNF8-209ENST00000510558 TUBGCP6Q96RT7 1819 aa31.35■■■□□ 2.61
SNF8-209ENST00000510558 AKT1S1Q96B36 256 aa31.35■■■□□ 2.61
SNF8-209ENST00000510558 NKX1-1Q15270 411 aaPredicted RBP31.34■■■□□ 2.61
SNF8-209ENST00000510558 MPRIPQ6WCQ1 1025 aa31.33■■■□□ 2.61
SNF8-209ENST00000510558 CCNL1Q9UK58 526 aaPredicted RBP31.33■■■□□ 2.61
SNF8-209ENST00000510558 ATF5Q9Y2D1 282 aaPredicted RBP31.33■■■□□ 2.61
SNF8-209ENST00000510558 PLEKHG2Q9H7P9 1386 aa31.32■■■□□ 2.6
SNF8-209ENST00000510558 PER1O15534 1290 aaPredicted RBP31.32■■■□□ 2.6
SNF8-209ENST00000510558 PTGER2P43116 358 aa31.31■■■□□ 2.6
SNF8-209ENST00000510558 MTFR1LQ9H019 292 aa31.31■■■□□ 2.6
SNF8-209ENST00000510558 IFNL2Q8IZJ0 200 aa31.29■■■□□ 2.6
SNF8-209ENST00000510558 PALLDQ8WX93 1383 aa31.29■■■□□ 2.6
SNF8-209ENST00000510558 C5P01031 1676 aa31.29■■■□□ 2.6
SNF8-209ENST00000510558 PHKG2P15735 406 aa31.28■■■□□ 2.6
SNF8-209ENST00000510558 TAF1LQ8IZX4 1826 aa31.27■■■□□ 2.6
SNF8-209ENST00000510558 PIGBQ92521 554 aa31.26■■■□□ 2.59
SNF8-209ENST00000510558 TFCP2L1Q9NZI6 479 aa31.26■■■□□ 2.59
SNF8-209ENST00000510558 PNPLA7Q6ZV29 1317 aa31.25■■■□□ 2.59
SNF8-209ENST00000510558 CC2D1BQ5T0F9 858 aaKnown RBP31.25■■■□□ 2.59
SNF8-209ENST00000510558 SMARCC1Q92922 1105 aaPredicted RBP31.24■■■□□ 2.59
SNF8-209ENST00000510558 AEBP1Q8IUX7 1158 aa31.23■■■□□ 2.59
SNF8-209ENST00000510558 SGIP1Q9BQI5 828 aa31.23■■■□□ 2.59
SNF8-209ENST00000510558 IL13P35225 146 aa31.22■■■□□ 2.59
SNF8-209ENST00000510558 MTHFSP49914 203 aa31.21■■■□□ 2.59
SNF8-209ENST00000510558 PLEKHO1Q53GL0 409 aaPredicted RBP31.21■■■□□ 2.59
SNF8-209ENST00000510558 TMOD3Q9NYL9 352 aa31.21■■■□□ 2.59
SNF8-209ENST00000510558 NPC1L1Q9UHC9 1359 aa31.2■■■□□ 2.59
SNF8-209ENST00000510558 SLC16A10Q8TF71 515 aa31.2■■■□□ 2.59
SNF8-209ENST00000510558 KDRP35968 1356 aa31.19■■■□□ 2.58
SNF8-209ENST00000510558 COL24A1Q17RW2 1714 aa31.19■■■□□ 2.58
SNF8-209ENST00000510558 SULT6B1Q6IMI4 303 aa31.19■■■□□ 2.58
SNF8-209ENST00000510558 AMOTQ4VCS5 1084 aa31.18■■■□□ 2.58
SNF8-209ENST00000510558 HMGB2P26583 209 aaKnown RBP31.17■■■□□ 2.58
SNF8-209ENST00000510558 ZNF530Q6P9A1 599 aaPredicted RBP31.17■■■□□ 2.58
SNF8-209ENST00000510558 C4BP0C0L5 1744 aa31.16■■■□□ 2.58
SNF8-209ENST00000510558 HSP90AB1P08238 724 aaKnown RBP31.16■■■□□ 2.58
SNF8-209ENST00000510558 CNGB1Q14028 1251 aaPredicted RBP31.14■■■□□ 2.58
SNF8-209ENST00000510558 DCAF5Q96JK2 942 aa31.14■■■□□ 2.58
SNF8-209ENST00000510558 ARXQ96QS3 562 aa31.14■■■□□ 2.58
SNF8-209ENST00000510558 ASAP1Q9ULH1 1129 aa31.14■■■□□ 2.58
SNF8-209ENST00000510558 FHDC1Q9C0D6 1143 aaPredicted RBP31.13■■■□□ 2.57
SNF8-209ENST00000510558 KDM6AO15550 1401 aaPredicted RBP31.13■■■□□ 2.57
SNF8-209ENST00000510558 LOC102724428A0A0B4J2F2 783 aa31.11■■■□□ 2.57
SNF8-209ENST00000510558 ERVV-2B6SEH9 535 aa31.11■■■□□ 2.57
SNF8-209ENST00000510558 SIK1P57059 783 aa31.11■■■□□ 2.57
SNF8-209ENST00000510558 COL23A1Q86Y22 540 aaPredicted RBP31.11■■■□□ 2.57
SNF8-209ENST00000510558 MSH5O43196 834 aa31.1■■■□□ 2.57
SNF8-209ENST00000510558 C1orf141Q5JVX7 400 aa31.1■■■□□ 2.57
SNF8-209ENST00000510558 UBR3Q6ZT12 1888 aa31.1■■■□□ 2.57
SNF8-209ENST00000510558 SYT17Q9BSW7 474 aa31.09■■■□□ 2.57
SNF8-209ENST00000510558 ATG3Q9NT62 314 aa31.09■■■□□ 2.57
SNF8-209ENST00000510558 DIAPH1O60610 1272 aaKnown RBP31.08■■■□□ 2.57
SNF8-209ENST00000510558 POLD1P28340 1107 aa31.08■■■□□ 2.57
SNF8-209ENST00000510558 DCAF8L1A6NGE4 600 aa31.07■■■□□ 2.56
SNF8-209ENST00000510558 AK7Q96M32 723 aa31.07■■■□□ 2.56
SNF8-209ENST00000510558 SCN11AQ9UI33 1791 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms