RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PAPPAQ13219 1627 aa14.63□□□□□ -0.07
DDX41-211ENST00000510171 NBPF6Q5VWK0 638 aa14.62□□□□□ -0.07
DDX41-211ENST00000510171 NBPF4Q96M43 638 aa14.62□□□□□ -0.07
DDX41-211ENST00000510171 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
DDX41-211ENST00000510171 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
DDX41-211ENST00000510171 RRS1Q15050 365 aaKnown RBP14.61□□□□□ -0.07
DDX41-211ENST00000510171 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
DDX41-211ENST00000510171 CGNL1Q0VF96 1302 aa14.61□□□□□ -0.07
DDX41-211ENST00000510171 USP47Q96K76 1375 aa14.6□□□□□ -0.07
DDX41-211ENST00000510171 FYB1O15117 783 aa14.6□□□□□ -0.07
DDX41-211ENST00000510171 HMGB2P26583 209 aaKnown RBP14.6□□□□□ -0.07
DDX41-211ENST00000510171 COL23A1Q86Y22 540 aaPredicted RBP14.6□□□□□ -0.07
DDX41-211ENST00000510171 NLGN2Q8NFZ4 835 aa14.6□□□□□ -0.07
DDX41-211ENST00000510171 NSD2O96028 1365 aa14.6□□□□□ -0.07
DDX41-211ENST00000510171 BTAF1O14981 1849 aa14.59□□□□□ -0.07
DDX41-211ENST00000510171 GRIN3BO60391 1043 aa14.59□□□□□ -0.07
DDX41-211ENST00000510171 TMF1P82094 1093 aa14.59□□□□□ -0.07
DDX41-211ENST00000510171 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
DDX41-211ENST00000510171 GGNBP2Q9H3C7 697 aa14.59□□□□□ -0.07
DDX41-211ENST00000510171 TATP17735 454 aaPredicted RBP14.58□□□□□ -0.08
DDX41-211ENST00000510171 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
DDX41-211ENST00000510171 LTN1O94822 1766 aa14.57□□□□□ -0.08
DDX41-211ENST00000510171 MEGF6O75095 1541 aa14.57□□□□□ -0.08
DDX41-211ENST00000510171 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
DDX41-211ENST00000510171 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
DDX41-211ENST00000510171 MSL1Q68DK7 614 aa14.56□□□□□ -0.08
DDX41-211ENST00000510171 SMG6Q86US8 1419 aaKnown RBP14.56□□□□□ -0.08
DDX41-211ENST00000510171 FLAD1Q8NFF5 587 aa14.55□□□□□ -0.08
DDX41-211ENST00000510171 YBX3P16989 372 aaKnown RBP eCLIP14.54□□□□□ -0.08
DDX41-211ENST00000510171 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
DDX41-211ENST00000510171 MPRIPQ6WCQ1 1025 aa14.54□□□□□ -0.08
DDX41-211ENST00000510171 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
DDX41-211ENST00000510171 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
DDX41-211ENST00000510171 INSRP06213 1382 aa14.53□□□□□ -0.08
DDX41-211ENST00000510171 CD2APQ9Y5K6 639 aa14.53□□□□□ -0.08
DDX41-211ENST00000510171 PALLDQ8WX93 1383 aa14.52□□□□□ -0.08
DDX41-211ENST00000510171 CYP27B1O15528 508 aa14.52□□□□□ -0.09
DDX41-211ENST00000510171 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.09
DDX41-211ENST00000510171 SMARCC1Q92922 1105 aaPredicted RBP14.52□□□□□ -0.09
DDX41-211ENST00000510171 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.09
DDX41-211ENST00000510171 FAM208AQ9UK61 1670 aaKnown RBP14.52□□□□□ -0.09
DDX41-211ENST00000510171 FLT4P35916 1363 aa14.51□□□□□ -0.09
DDX41-211ENST00000510171 UTRNP46939 3433 aa14.51□□□□□ -0.09
DDX41-211ENST00000510171 KIF24Q5T7B8 1368 aa14.5□□□□□ -0.09
DDX41-211ENST00000510171 AK7Q96M32 723 aa14.5□□□□□ -0.09
DDX41-211ENST00000510171 PPM1GO15355 546 aaPredicted RBP14.49□□□□□ -0.09
DDX41-211ENST00000510171 PIGBQ92521 554 aa14.49□□□□□ -0.09
DDX41-211ENST00000510171 CARD14Q9BXL6 1004 aa14.49□□□□□ -0.09
DDX41-211ENST00000510171 NKX1-1Q15270 411 aaPredicted RBP14.48□□□□□ -0.09
DDX41-211ENST00000510171 SPG7Q9UQ90 795 aa14.48□□□□□ -0.09
DDX41-211ENST00000510171 EMILIN1Q9Y6C2 1016 aa14.48□□□□□ -0.09
DDX41-211ENST00000510171 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
DDX41-211ENST00000510171 DOT1LQ8TEK3 1739 aa14.47□□□□□ -0.09
DDX41-211ENST00000510171 PHF14O94880 888 aa14.47□□□□□ -0.09
DDX41-211ENST00000510171 CHD4Q14839 1912 aa14.47□□□□□ -0.09
DDX41-211ENST00000510171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.46□□□□□ -0.09
DDX41-211ENST00000510171 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
DDX41-211ENST00000510171 LY75O60449 1722 aa14.46□□□□□ -0.1
DDX41-211ENST00000510171 LOC102724428A0A0B4J2F2 783 aa14.45□□□□□ -0.1
DDX41-211ENST00000510171 SIK1P57059 783 aa14.45□□□□□ -0.1
DDX41-211ENST00000510171 COL24A1Q17RW2 1714 aa14.45□□□□□ -0.1
DDX41-211ENST00000510171 AMIGO3Q86WK7 504 aa14.45□□□□□ -0.1
DDX41-211ENST00000510171 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
DDX41-211ENST00000510171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDX41-211ENST00000510171 WASHC2AQ641Q2 1341 aa14.44□□□□□ -0.1
DDX41-211ENST00000510171 SSFA2P28290 1259 aa14.44□□□□□ -0.1
DDX41-211ENST00000510171 EYA1Q99502 592 aa14.44□□□□□ -0.1
DDX41-211ENST00000510171 TMOD3Q9NYL9 352 aa14.44□□□□□ -0.1
DDX41-211ENST00000510171 ATP10DQ9P241 1426 aa14.43□□□□□ -0.1
DDX41-211ENST00000510171 LINC00116Q8NCU8 138 aa14.43□□□□□ -0.1
DDX41-211ENST00000510171 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
DDX41-211ENST00000510171 SHANK3Q9BYB0 1731 aa14.43□□□□□ -0.1
DDX41-211ENST00000510171 NSD3Q9BZ95 1437 aa14.42□□□□□ -0.1
DDX41-211ENST00000510171 IFNL2Q8IZJ0 200 aa14.42□□□□□ -0.1
DDX41-211ENST00000510171 WWC3Q9ULE0 1092 aa14.42□□□□□ -0.1
DDX41-211ENST00000510171 RGPD2P0DJD1 1756 aa14.42□□□□□ -0.1
DDX41-211ENST00000510171 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 GNPATO15228 680 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 PHKG2P15735 406 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 ATP6V1AP38606 617 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 ITPK1Q13572 414 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
DDX41-211ENST00000510171 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 TUBGCP6Q96RT7 1819 aa14.41□□□□□ -0.1
DDX41-211ENST00000510171 ATG3Q9NT62 314 aa14.4□□□□□ -0.1
DDX41-211ENST00000510171 NCAPD2Q15021 1401 aa14.4□□□□□ -0.1
DDX41-211ENST00000510171 MMP10P09238 476 aa14.38□□□□□ -0.11
DDX41-211ENST00000510171 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
DDX41-211ENST00000510171 ADCY9O60503 1353 aa14.37□□□□□ -0.11
DDX41-211ENST00000510171 HSPA6P17066 643 aa14.37□□□□□ -0.11
DDX41-211ENST00000510171 TNNT2P45379 298 aaPredicted RBP14.37□□□□□ -0.11
DDX41-211ENST00000510171 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
DDX41-211ENST00000510171 TRAPPC3LQ5T215 181 aa14.37□□□□□ -0.11
DDX41-211ENST00000510171 POLR3GLQ9BT43 218 aa14.37□□□□□ -0.11
DDX41-211ENST00000510171 RTCBQ9Y3I0 505 aaKnown RBP14.37□□□□□ -0.11
DDX41-211ENST00000510171 C5P01031 1676 aa14.36□□□□□ -0.11
DDX41-211ENST00000510171 C4BP0C0L5 1744 aa14.36□□□□□ -0.11
DDX41-211ENST00000510171 NLGN1Q8N2Q7 840 aa14.36□□□□□ -0.11
DDX41-211ENST00000510171 TIMELESSQ9UNS1 1208 aa14.36□□□□□ -0.11
DDX41-211ENST00000510171 ERVV-2B6SEH9 535 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms