RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.09
SCAMP1-203ENST00000510030 IL16Q14005 1332 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 FAM83GA6ND36 823 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 E9PSI1 815 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 NEUROD2Q15784 382 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 RAPGEF4Q8WZA2 1011 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 PARP4Q9UKK3 1724 aaKnown RBP21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 DLG5Q8TDM6 1919 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 CRB1P82279 1406 aa21.88■■□□□ 1.09
SCAMP1-203ENST00000510030 HTATSF1O43719 755 aaKnown RBP21.87■■□□□ 1.09
SCAMP1-203ENST00000510030 PLEKHO1Q53GL0 409 aaPredicted RBP21.87■■□□□ 1.09
SCAMP1-203ENST00000510030 PHACTR3Q96KR7 559 aa21.87■■□□□ 1.09
SCAMP1-203ENST00000510030 TOM1L2Q6ZVM7 507 aa21.86■■□□□ 1.09
SCAMP1-203ENST00000510030 CARD10Q9BWT7 1032 aa21.86■■□□□ 1.09
SCAMP1-203ENST00000510030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.86■■□□□ 1.095e-8■□□□□ 9.7
SCAMP1-203ENST00000510030 RRP7AQ9Y3A4 280 aaKnown RBP21.86■■□□□ 1.09
SCAMP1-203ENST00000510030 MYH16Q9H6N6 1097 aa21.85■■□□□ 1.09
SCAMP1-203ENST00000510030 BTG4Q9NY30 223 aa21.85■■□□□ 1.09
SCAMP1-203ENST00000510030 TATP17735 454 aaPredicted RBP21.84■■□□□ 1.09
SCAMP1-203ENST00000510030 RTF1Q92541 710 aaKnown RBP21.84■■□□□ 1.09
SCAMP1-203ENST00000510030 NRAPQ86VF7 1730 aa21.83■■□□□ 1.09
SCAMP1-203ENST00000510030 GLI3P10071 1580 aa21.83■■□□□ 1.09
SCAMP1-203ENST00000510030 USHBP1Q8N6Y0 703 aa21.83■■□□□ 1.09
SCAMP1-203ENST00000510030 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
SCAMP1-203ENST00000510030 SLIT2O94813 1529 aa21.81■■□□□ 1.08
SCAMP1-203ENST00000510030 PKD1L3Q7Z443 1732 aa21.81■■□□□ 1.08
SCAMP1-203ENST00000510030 STRN4Q9NRL3 753 aa21.81■■□□□ 1.08
SCAMP1-203ENST00000510030 TRIM35Q9UPQ4 493 aa21.81■■□□□ 1.08
SCAMP1-203ENST00000510030 MAP3K5Q99683 1374 aa21.81■■□□□ 1.08
SCAMP1-203ENST00000510030 EP400Q96L91 3159 aa21.8■■□□□ 1.08
SCAMP1-203ENST00000510030 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
SCAMP1-203ENST00000510030 SLFN5Q08AF3 891 aa21.8■■□□□ 1.08
SCAMP1-203ENST00000510030 MTHFSDQ2M296 383 aaKnown RBP21.8■■□□□ 1.08
SCAMP1-203ENST00000510030 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
SCAMP1-203ENST00000510030 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
SCAMP1-203ENST00000510030 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
SCAMP1-203ENST00000510030 GJD4Q96KN9 370 aaPredicted RBP21.79■■□□□ 1.08
SCAMP1-203ENST00000510030 CDCA7Q9BWT1 371 aaPredicted RBP21.79■■□□□ 1.08
SCAMP1-203ENST00000510030 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
SCAMP1-203ENST00000510030 THRAP3Q9Y2W1 955 aaKnown RBP21.78■■□□□ 1.08
SCAMP1-203ENST00000510030 IL2RBP14784 551 aa21.77■■□□□ 1.08
SCAMP1-203ENST00000510030 GNAI1P63096 354 aa21.77■■□□□ 1.08
SCAMP1-203ENST00000510030 AKAP4Q5JQC9 854 aa21.77■■□□□ 1.08
SCAMP1-203ENST00000510030 LRRC37A3O60309 1634 aa21.77■■□□□ 1.07
SCAMP1-203ENST00000510030 MEGF6O75095 1541 aa21.76■■□□□ 1.07
SCAMP1-203ENST00000510030 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
SCAMP1-203ENST00000510030 UNC5CLQ8IV45 518 aa21.76■■□□□ 1.07
SCAMP1-203ENST00000510030 TRMT2AQ8IZ69 625 aaKnown RBP21.76■■□□□ 1.07
SCAMP1-203ENST00000510030 IFT57Q9NWB7 429 aa21.76■■□□□ 1.07
SCAMP1-203ENST00000510030 WNK3Q9BYP7 1800 aa21.76■■□□□ 1.07
SCAMP1-203ENST00000510030 HSP90AB1P08238 724 aaKnown RBP21.75■■□□□ 1.07
SCAMP1-203ENST00000510030 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
SCAMP1-203ENST00000510030 CT47B1P0C2W7 299 aaPredicted RBP21.74■■□□□ 1.07
SCAMP1-203ENST00000510030 DUSP27Q5VZP5 1158 aa21.74■■□□□ 1.07
SCAMP1-203ENST00000510030 PCDH11XQ9BZA7 1347 aa21.74■■□□□ 1.07
SCAMP1-203ENST00000510030 PCDH11YQ9BZA8 1340 aa21.74■■□□□ 1.07
SCAMP1-203ENST00000510030 CDCA7LQ96GN5 454 aa21.73■■□□□ 1.07
SCAMP1-203ENST00000510030 BABAM1Q9NWV8 329 aa21.73■■□□□ 1.07
SCAMP1-203ENST00000510030 CFAP44Q96MT7 982 aa21.72■■□□□ 1.07
SCAMP1-203ENST00000510030 BRWD3Q6RI45 1802 aa21.71■■□□□ 1.07
SCAMP1-203ENST00000510030 IFNL2Q8IZJ0 200 aa21.71■■□□□ 1.07
SCAMP1-203ENST00000510030 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
SCAMP1-203ENST00000510030 ZCRB1Q8TBF4 217 aaKnown RBP21.69■■□□□ 1.06
SCAMP1-203ENST00000510030 CCDC9Q9Y3X0 531 aaKnown RBP21.69■■□□□ 1.06
SCAMP1-203ENST00000510030 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
SCAMP1-203ENST00000510030 CEMIPQ8WUJ3 1361 aa21.69■■□□□ 1.06
SCAMP1-203ENST00000510030 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
SCAMP1-203ENST00000510030 VPS72Q15906 364 aa21.68■■□□□ 1.06
SCAMP1-203ENST00000510030 SPATA31A5Q5VU36 1347 aa21.68■■□□□ 1.06
SCAMP1-203ENST00000510030 SPATA31A7Q8IWB4 1347 aa21.68■■□□□ 1.06
SCAMP1-203ENST00000510030 FANCIQ9NVI1 1328 aa21.68■■□□□ 1.06
SCAMP1-203ENST00000510030 VIRMAQ69YN4 1812 aaKnown RBP21.68■■□□□ 1.06
SCAMP1-203ENST00000510030 SRCAPQ6ZRS2 3230 aa21.68■■□□□ 1.06
SCAMP1-203ENST00000510030 BARGINQ6ZT62 677 aa21.67■■□□□ 1.06
SCAMP1-203ENST00000510030 MCM10Q7L590 875 aa21.67■■□□□ 1.06
SCAMP1-203ENST00000510030 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
SCAMP1-203ENST00000510030 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 ZNF853P0CG23 659 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 PHKG2P15735 406 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 TEFQ10587 303 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 SEPT12Q8IYM1 358 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 DCAF5Q96JK2 942 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
SCAMP1-203ENST00000510030 SPINK5Q9NQ38 1064 aaPredicted RBP21.65■■□□□ 1.06
SCAMP1-203ENST00000510030 USP35Q9P2H5 1018 aa21.65■■□□□ 1.06
SCAMP1-203ENST00000510030 TNS2Q63HR2 1409 aa21.64■■□□□ 1.06
SCAMP1-203ENST00000510030 DEFB132Q7Z7B7 95 aa21.64■■□□□ 1.05
SCAMP1-203ENST00000510030 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 CHL1O00533 1208 aa21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 NEFLP07196 543 aa21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 THUMPD2Q9BTF0 503 aaKnown RBP21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 CHMP4AQ9BY43 222 aa21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 LAS1LQ9Y4W2 734 aaKnown RBP21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
SCAMP1-203ENST00000510030 RNMTO43148 476 aaKnown RBP21.62■■□□□ 1.05
SCAMP1-203ENST00000510030 IL17REQ8NFR9 667 aa21.62■■□□□ 1.05
SCAMP1-203ENST00000510030 MRC1P22897 1456 aa21.62■■□□□ 1.05
SCAMP1-203ENST00000510030 EXOC5O00471 708 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms