RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 TRIM6-TRIM34B2RNG4 842 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 WWC1Q8IX03 1113 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 KIAA1468Q9P260 1216 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 MYT1LQ9UL68 1186 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 ROCK1Q13464 1354 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 PPP1R15AO75807 674 aaPredicted RBP7.68□□□□□ -1.18
NEK1-204ENST00000509912 MTMR2Q13614 643 aa7.67□□□□□ -1.18
NEK1-204ENST00000509912 UGGT1Q9NYU2 1555 aa7.67□□□□□ -1.18
NEK1-204ENST00000509912 BCL2L12Q9HB09 334 aa7.67□□□□□ -1.18
NEK1-204ENST00000509912 EFCAB6Q5THR3 1501 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 PIK3C2BO00750 1634 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 CAMSAP1Q5T5Y3 1602 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 NBPF26B4DH59 902 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 PTPREP23469 700 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 GCGRP47871 477 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 ALG2Q9H553 416 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 CCNB3Q8WWL7 1395 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 ABCC3O15438 1527 aa7.66□□□□□ -1.18
NEK1-204ENST00000509912 CLTCQ00610 1675 aaKnown RBP7.66□□□□□ -1.18
NEK1-204ENST00000509912 TMEM88BA6NKF7 163 aa7.65□□□□□ -1.18
NEK1-204ENST00000509912 PPP1R3GB7ZBB8 358 aa7.65□□□□□ -1.18
NEK1-204ENST00000509912 IQGAP3Q86VI3 1631 aa7.65□□□□□ -1.18
NEK1-204ENST00000509912 MAFBQ9Y5Q3 323 aaPredicted RBP7.65□□□□□ -1.18
NEK1-204ENST00000509912 HELBQ8NG08 1087 aaPredicted RBP7.65□□□□□ -1.19
NEK1-204ENST00000509912 LAMC1P11047 1609 aa7.64□□□□□ -1.19
NEK1-204ENST00000509912 CCDC27Q2M243 656 aa7.64□□□□□ -1.19
NEK1-204ENST00000509912 PPP4R3BQ5MIZ7 849 aa7.64□□□□□ -1.19
NEK1-204ENST00000509912 PRM3Q9NNZ6 103 aa7.64□□□□□ -1.19
NEK1-204ENST00000509912 TET3O43151 1660 aa7.64□□□□□ -1.19
NEK1-204ENST00000509912 PACS2Q86VP3 889 aa7.63□□□□□ -1.19
NEK1-204ENST00000509912 UBR1Q8IWV7 1749 aa7.63□□□□□ -1.19
NEK1-204ENST00000509912 BRD1O95696 1058 aa7.62□□□□□ -1.19
NEK1-204ENST00000509912 ZMIZ1Q9ULJ6 1067 aa7.62□□□□□ -1.19
NEK1-204ENST00000509912 TMEM164Q5U3C3 297 aa7.62□□□□□ -1.19
NEK1-204ENST00000509912 SAMD7Q7Z3H4 446 aa7.62□□□□□ -1.19
NEK1-204ENST00000509912 VRTNQ9H8Y1 702 aa7.62□□□□□ -1.19
NEK1-204ENST00000509912 FBXO45P0C2W1 286 aa7.61□□□□□ -1.19
NEK1-204ENST00000509912 NOS1P29475 1434 aa7.61□□□□□ -1.19
NEK1-204ENST00000509912 CFHP08603 1231 aa7.61□□□□□ -1.19
NEK1-204ENST00000509912 ZMYM3Q14202 1370 aa7.61□□□□□ -1.19
NEK1-204ENST00000509912 UNCXA6NJT0 531 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 PRPF38BQ5VTL8 546 aaKnown RBP7.6□□□□□ -1.19
NEK1-204ENST00000509912 RNF19BQ6ZMZ0 732 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 MAP10Q9P2G4 905 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 PIK3R4Q99570 1358 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 KCNH2Q12809 1159 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 SEMA3FQ13275 785 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 POTEEQ6S8J3 1075 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 SLAIN2Q9P270 581 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 ERVK-7P63135 1459 aa7.6□□□□□ -1.19
NEK1-204ENST00000509912 SPAG9O60271 1321 aaKnown RBP7.6□□□□□ -1.19
NEK1-204ENST00000509912 IQGAP1P46940 1657 aa7.59□□□□□ -1.19
NEK1-204ENST00000509912 DOK7Q18PE1 504 aa7.59□□□□□ -1.19
NEK1-204ENST00000509912 GAS2L2Q8NHY3 880 aa7.59□□□□□ -1.19
NEK1-204ENST00000509912 CRTC2Q53ET0 693 aaPredicted RBP7.59□□□□□ -1.19
NEK1-204ENST00000509912 NKTRP30414 1462 aaKnown RBP7.59□□□□□ -1.19
NEK1-204ENST00000509912 SERPINB4P48594 390 aa7.59□□□□□ -1.2
NEK1-204ENST00000509912 HSPA2P54652 639 aa7.59□□□□□ -1.2
NEK1-204ENST00000509912 MLECQ14165 292 aa7.59□□□□□ -1.2
NEK1-204ENST00000509912 WASHC4Q2M389 1173 aa7.59□□□□□ -1.2
NEK1-204ENST00000509912 TUSC1Q2TAM9 212 aa7.59□□□□□ -1.2
NEK1-204ENST00000509912 MTUS2Q5JR59 1369 aa7.58□□□□□ -1.2
NEK1-204ENST00000509912 PHLDB3Q6NSJ2 640 aa7.58□□□□□ -1.2
NEK1-204ENST00000509912 BLOC1S3Q6QNY0 202 aa7.58□□□□□ -1.2
NEK1-204ENST00000509912 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
NEK1-204ENST00000509912 CLCN6P51797 869 aa7.57□□□□□ -1.2
NEK1-204ENST00000509912 DMRTA1Q5VZB9 504 aa7.57□□□□□ -1.2
NEK1-204ENST00000509912 SLC27A5Q9Y2P5 690 aa7.57□□□□□ -1.2
NEK1-204ENST00000509912 ADGRB3O60242 1522 aa7.57□□□□□ -1.2
NEK1-204ENST00000509912 ZNF594Q96JF6 807 aaPredicted RBP7.57□□□□□ -1.2
NEK1-204ENST00000509912 ZBED2Q9BTP6 218 aa7.57□□□□□ -1.2
NEK1-204ENST00000509912 E9PSI1 815 aa7.56□□□□□ -1.2
NEK1-204ENST00000509912 RIMBP2O15034 1052 aa7.56□□□□□ -1.2
NEK1-204ENST00000509912 TSGA10IPQ3SY00 556 aa7.56□□□□□ -1.2
NEK1-204ENST00000509912 SND1Q7KZF4 910 aaKnown RBP eCLIP7.56□□□□□ -1.2
NEK1-204ENST00000509912 CEP152O94986 1710 aa7.55□□□□□ -1.2
NEK1-204ENST00000509912 ZFYVE9O95405 1425 aa7.55□□□□□ -1.2
NEK1-204ENST00000509912 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
NEK1-204ENST00000509912 USTQ9Y2C2 406 aa7.55□□□□□ -1.2
NEK1-204ENST00000509912 ABCC5O15440 1437 aa7.55□□□□□ -1.2
NEK1-204ENST00000509912 DAPK1P53355 1430 aa7.55□□□□□ -1.2
NEK1-204ENST00000509912 FGD6Q6ZV73 1430 aa7.55□□□□□ -1.2
NEK1-204ENST00000509912 SKIP12755 728 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 GJA5P36382 358 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 ANO2Q9NQ90 1003 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 TNRQ92752 1358 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 USP17L3A6NCW0 530 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 USP17L4A6NCW7 530 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 USP17L1Q7RTZ2 530 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 CFDP1Q9UEE9 299 aaPredicted RBP7.54□□□□□ -1.2
NEK1-204ENST00000509912 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
NEK1-204ENST00000509912 MYT1Q01538 1121 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 NCOA4Q13772 614 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 DCCP43146 1447 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 KCNA1Q09470 495 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms