RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 MYOM1P52179 1685 aa21.44■■□□□ 1.02
SMAD5-205ENST00000509297 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
SMAD5-205ENST00000509297 SGIP1Q9BQI5 828 aa21.44■■□□□ 1.02
SMAD5-205ENST00000509297 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
SMAD5-205ENST00000509297 RGPD2P0DJD1 1756 aa21.43■■□□□ 1.02
SMAD5-205ENST00000509297 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
SMAD5-205ENST00000509297 ATF5Q9Y2D1 282 aaPredicted RBP21.43■■□□□ 1.02
SMAD5-205ENST00000509297 NSD2O96028 1365 aa21.42■■□□□ 1.02
SMAD5-205ENST00000509297 ZNF827Q17R98 1081 aa21.42■■□□□ 1.02
SMAD5-205ENST00000509297 HSP90AB2PQ58FF8 381 aa21.42■■□□□ 1.02
SMAD5-205ENST00000509297 RAPGEF4Q8WZA2 1011 aa21.42■■□□□ 1.02
SMAD5-205ENST00000509297 AKT1S1Q96B36 256 aa21.42■■□□□ 1.02
SMAD5-205ENST00000509297 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
SMAD5-205ENST00000509297 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
SMAD5-205ENST00000509297 KAT6BQ8WYB5 2073 aa21.4■■□□□ 1.02
SMAD5-205ENST00000509297 TATP17735 454 aaPredicted RBP21.39■■□□□ 1.01
SMAD5-205ENST00000509297 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
SMAD5-205ENST00000509297 SYTL4Q96C24 671 aaPredicted RBP21.39■■□□□ 1.01
SMAD5-205ENST00000509297 QSER1Q2KHR3 1735 aa21.38■■□□□ 1.01
SMAD5-205ENST00000509297 LY75O60449 1722 aa21.38■■□□□ 1.01
SMAD5-205ENST00000509297 MAP3K5Q99683 1374 aa21.37■■□□□ 1.01
SMAD5-205ENST00000509297 YY1P25490 414 aa21.37■■□□□ 1.01
SMAD5-205ENST00000509297 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
SMAD5-205ENST00000509297 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
SMAD5-205ENST00000509297 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
SMAD5-205ENST00000509297 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
SMAD5-205ENST00000509297 SYT17Q9BSW7 474 aa21.36■■□□□ 1.01
SMAD5-205ENST00000509297 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
SMAD5-205ENST00000509297 FHDC1Q9C0D6 1143 aaPredicted RBP21.36■■□□□ 1.01
SMAD5-205ENST00000509297 ANKRD26Q9UPS8 1709 aa21.35■■□□□ 1.01
SMAD5-205ENST00000509297 ARXQ96QS3 562 aa21.35■■□□□ 1.01
SMAD5-205ENST00000509297 EMILIN1Q9Y6C2 1016 aa21.35■■□□□ 1.01
SMAD5-205ENST00000509297 WASHC2AQ641Q2 1341 aa21.34■■□□□ 1.01
SMAD5-205ENST00000509297 HMGB2P26583 209 aaKnown RBP21.34■■□□□ 1.01
SMAD5-205ENST00000509297 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
SMAD5-205ENST00000509297 TFCP2L1Q9NZI6 479 aa21.32■■□□□ 1
SMAD5-205ENST00000509297 CCNL1Q9UK58 526 aaPredicted RBP21.32■■□□□ 1
SMAD5-205ENST00000509297 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
SMAD5-205ENST00000509297 CYP27B1O15528 508 aa21.3■■□□□ 1
SMAD5-205ENST00000509297 PKD1L3Q7Z443 1732 aa21.29■■□□□ 1
SMAD5-205ENST00000509297 PLEKHG2Q9H7P9 1386 aa21.29■■□□□ 1
SMAD5-205ENST00000509297 KCNQ4P56696 695 aa21.29■■□□□ 1
SMAD5-205ENST00000509297 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
SMAD5-205ENST00000509297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 14e-12■□□□□ 9.3
SMAD5-205ENST00000509297 UTRNP46939 3433 aa21.29■■□□□ 1
SMAD5-205ENST00000509297 POLD1P28340 1107 aa21.28■■□□□ 1
SMAD5-205ENST00000509297 NKX1-1Q15270 411 aaPredicted RBP21.28■■□□□ 1
SMAD5-205ENST00000509297 POLKQ9UBT6 870 aa21.28■■□□□ 1
SMAD5-205ENST00000509297 PPM1GO15355 546 aaPredicted RBP21.27■■□□□ 1
SMAD5-205ENST00000509297 SPG7Q9UQ90 795 aa21.26■□□□□ 0.99
SMAD5-205ENST00000509297 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
SMAD5-205ENST00000509297 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
SMAD5-205ENST00000509297 EYA1Q99502 592 aa21.25■□□□□ 0.99
SMAD5-205ENST00000509297 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
SMAD5-205ENST00000509297 HSPA5P11021 654 aaKnown RBP21.24■□□□□ 0.99
SMAD5-205ENST00000509297 MPRIPQ6WCQ1 1025 aa21.24■□□□□ 0.99
SMAD5-205ENST00000509297 MAP2P11137 1827 aaKnown RBP21.24■□□□□ 0.99
SMAD5-205ENST00000509297 TOGARAM1Q9Y4F4 1720 aa21.23■□□□□ 0.99
SMAD5-205ENST00000509297 FLAD1Q8NFF5 587 aa21.22■□□□□ 0.99
SMAD5-205ENST00000509297 POLR3GLQ9BT43 218 aa21.22■□□□□ 0.99
SMAD5-205ENST00000509297 C5P01031 1676 aa21.21■□□□□ 0.99
SMAD5-205ENST00000509297 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
SMAD5-205ENST00000509297 PANK3Q9H999 370 aa21.21■□□□□ 0.99
SMAD5-205ENST00000509297 EIF4A2Q14240 407 aaKnown RBP21.2■□□□□ 0.98
SMAD5-205ENST00000509297 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
SMAD5-205ENST00000509297 PIGBQ92521 554 aa21.2■□□□□ 0.98
SMAD5-205ENST00000509297 ITGB4P16144 1822 aa21.19■□□□□ 0.98
SMAD5-205ENST00000509297 IFNL2Q8IZJ0 200 aa21.18■□□□□ 0.98
SMAD5-205ENST00000509297 TAF1LQ8IZX4 1826 aa21.18■□□□□ 0.98
SMAD5-205ENST00000509297 PHKG2P15735 406 aa21.17■□□□□ 0.98
SMAD5-205ENST00000509297 IGSF1Q8N6C5 1336 aa21.17■□□□□ 0.98
SMAD5-205ENST00000509297 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
SMAD5-205ENST00000509297 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
SMAD5-205ENST00000509297 MSH5O43196 834 aa21.15■□□□□ 0.98
SMAD5-205ENST00000509297 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
SMAD5-205ENST00000509297 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
SMAD5-205ENST00000509297 GPR162Q16538 588 aa21.14■□□□□ 0.97
SMAD5-205ENST00000509297 LOC102724428A0A0B4J2F2 783 aa21.13■□□□□ 0.97
SMAD5-205ENST00000509297 SIK1P57059 783 aa21.13■□□□□ 0.97
SMAD5-205ENST00000509297 ZNF784Q8NCA9 323 aaPredicted RBP21.13■□□□□ 0.97
SMAD5-205ENST00000509297 AK7Q96M32 723 aa21.13■□□□□ 0.97
SMAD5-205ENST00000509297 CHD4Q14839 1912 aa21.13■□□□□ 0.97
SMAD5-205ENST00000509297 KLHL34Q8N239 644 aa21.12■□□□□ 0.97
SMAD5-205ENST00000509297 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
SMAD5-205ENST00000509297 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
SMAD5-205ENST00000509297 NLGN2Q8NFZ4 835 aa21.11■□□□□ 0.97
SMAD5-205ENST00000509297 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
SMAD5-205ENST00000509297 SSFA2P28290 1259 aa21.1■□□□□ 0.97
SMAD5-205ENST00000509297 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
SMAD5-205ENST00000509297 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
SMAD5-205ENST00000509297 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
SMAD5-205ENST00000509297 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
SMAD5-205ENST00000509297 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
SMAD5-205ENST00000509297 DCAF5Q96JK2 942 aa21.09■□□□□ 0.97
SMAD5-205ENST00000509297 KNSTRNQ9Y448 316 aa21.09■□□□□ 0.97
SMAD5-205ENST00000509297 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
SMAD5-205ENST00000509297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
SMAD5-205ENST00000509297 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.97
SMAD5-205ENST00000509297 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
SMAD5-205ENST00000509297 ATG3Q9NT62 314 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms