RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 ANKRD26Q9UPS8 1709 aa30.52■■■□□ 2.48
PACRGL-220ENST00000508952 MAP2P11137 1827 aaKnown RBP30.5■■■□□ 2.47
PACRGL-220ENST00000508952 ZCRB1Q8TBF4 217 aaKnown RBP30.5■■■□□ 2.47
PACRGL-220ENST00000508952 DOT1LQ8TEK3 1739 aa30.5■■■□□ 2.47
PACRGL-220ENST00000508952 PPM1GO15355 546 aaPredicted RBP30.48■■■□□ 2.47
PACRGL-220ENST00000508952 CASZ1Q86V15 1759 aa30.47■■■□□ 2.47
PACRGL-220ENST00000508952 RAPGEF4Q8WZA2 1011 aa30.46■■■□□ 2.47
PACRGL-220ENST00000508952 PANK3Q9H999 370 aa30.46■■■□□ 2.47
PACRGL-220ENST00000508952 PDGFDQ9GZP0 370 aaPredicted RBP30.43■■■□□ 2.46
PACRGL-220ENST00000508952 STK32BQ9NY57 414 aa30.43■■■□□ 2.46
PACRGL-220ENST00000508952 TATP17735 454 aaPredicted RBP30.42■■■□□ 2.46
PACRGL-220ENST00000508952 TNNT2P45379 298 aaPredicted RBP30.42■■■□□ 2.46
PACRGL-220ENST00000508952 SYTL4Q96C24 671 aaPredicted RBP30.42■■■□□ 2.46
PACRGL-220ENST00000508952 PAPPAQ13219 1627 aa30.41■■■□□ 2.46
PACRGL-220ENST00000508952 PRIM1P49642 420 aaKnown RBP30.41■■■□□ 2.46
PACRGL-220ENST00000508952 SLC15A2Q16348 729 aa30.4■■■□□ 2.46
PACRGL-220ENST00000508952 SPON1Q9HCB6 807 aa30.4■■■□□ 2.46
PACRGL-220ENST00000508952 POLKQ9UBT6 870 aa30.4■■■□□ 2.46
PACRGL-220ENST00000508952 WASHC2AQ641Q2 1341 aa30.4■■■□□ 2.46
PACRGL-220ENST00000508952 NSD2O96028 1365 aa30.38■■■□□ 2.45
PACRGL-220ENST00000508952 LRRC4BQ9NT99 713 aa30.36■■■□□ 2.45
PACRGL-220ENST00000508952 NCAPD2Q15021 1401 aa30.36■■■□□ 2.45
PACRGL-220ENST00000508952 PKD1L3Q7Z443 1732 aa30.35■■■□□ 2.45
PACRGL-220ENST00000508952 PCDH11XQ9BZA7 1347 aa30.34■■■□□ 2.45
PACRGL-220ENST00000508952 PCDH11YQ9BZA8 1340 aa30.34■■■□□ 2.45
PACRGL-220ENST00000508952 ZBTB7AO95365 584 aa30.34■■■□□ 2.45
PACRGL-220ENST00000508952 LY75O60449 1722 aa30.33■■■□□ 2.45
PACRGL-220ENST00000508952 EYA1Q99502 592 aa30.32■■■□□ 2.44
PACRGL-220ENST00000508952 PPP1R1BQ9UD71 204 aaPredicted RBP30.32■■■□□ 2.44
PACRGL-220ENST00000508952 ZNF827Q17R98 1081 aa30.31■■■□□ 2.44
PACRGL-220ENST00000508952 KIF7Q2M1P5 1343 aa30.3■■■□□ 2.44
PACRGL-220ENST00000508952 CYP27B1O15528 508 aa30.3■■■□□ 2.44
PACRGL-220ENST00000508952 KCNQ4P56696 695 aa30.3■■■□□ 2.44
PACRGL-220ENST00000508952 TOGARAM1Q9Y4F4 1720 aa30.28■■■□□ 2.44
PACRGL-220ENST00000508952 EIF4A2Q14240 407 aaKnown RBP30.28■■■□□ 2.44
PACRGL-220ENST00000508952 SLC27A3Q5K4L6 730 aa30.28■■■□□ 2.44
PACRGL-220ENST00000508952 ATF5Q9Y2D1 282 aaPredicted RBP30.27■■■□□ 2.44
PACRGL-220ENST00000508952 MORC1Q86VD1 984 aa30.26■■■□□ 2.43
PACRGL-220ENST00000508952 KNSTRNQ9Y448 316 aa30.26■■■□□ 2.43
PACRGL-220ENST00000508952 ITGB4P16144 1822 aa30.25■■■□□ 2.43
PACRGL-220ENST00000508952 TUBGCP6Q96RT7 1819 aa30.24■■■□□ 2.43
PACRGL-220ENST00000508952 PTGER2P43116 358 aa30.23■■■□□ 2.43
PACRGL-220ENST00000508952 AKT1S1Q96B36 256 aa30.23■■■□□ 2.43
PACRGL-220ENST00000508952 SPG7Q9UQ90 795 aa30.22■■■□□ 2.43
PACRGL-220ENST00000508952 QSER1Q2KHR3 1735 aa30.22■■■□□ 2.43
PACRGL-220ENST00000508952 MPRIPQ6WCQ1 1025 aa30.21■■■□□ 2.43
PACRGL-220ENST00000508952 MTFR1LQ9H019 292 aa30.21■■■□□ 2.43
PACRGL-220ENST00000508952 CCNL1Q9UK58 526 aaPredicted RBP30.21■■■□□ 2.43
PACRGL-220ENST00000508952 AMER1Q5JTC6 1135 aaPredicted RBP30.18■■■□□ 2.42
PACRGL-220ENST00000508952 IGSF1Q8N6C5 1336 aa30.18■■■□□ 2.42
PACRGL-220ENST00000508952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.17■■■□□ 2.429e-6■□□□□ 9.4
PACRGL-220ENST00000508952 NKX1-1Q15270 411 aaPredicted RBP30.16■■■□□ 2.42
PACRGL-220ENST00000508952 TFCP2L1Q9NZI6 479 aa30.16■■■□□ 2.42
PACRGL-220ENST00000508952 PNPLA7Q6ZV29 1317 aa30.16■■■□□ 2.42
PACRGL-220ENST00000508952 C5P01031 1676 aa30.15■■■□□ 2.42
PACRGL-220ENST00000508952 PALLDQ8WX93 1383 aa30.15■■■□□ 2.42
PACRGL-220ENST00000508952 SGIP1Q9BQI5 828 aa30.14■■■□□ 2.42
PACRGL-220ENST00000508952 PHKG2P15735 406 aa30.12■■■□□ 2.41
PACRGL-220ENST00000508952 PIGBQ92521 554 aa30.12■■■□□ 2.41
PACRGL-220ENST00000508952 TAF1LQ8IZX4 1826 aa30.12■■■□□ 2.41
PACRGL-220ENST00000508952 IFNL2Q8IZJ0 200 aa30.11■■■□□ 2.41
PACRGL-220ENST00000508952 PER1O15534 1290 aaPredicted RBP30.09■■■□□ 2.41
PACRGL-220ENST00000508952 AEBP1Q8IUX7 1158 aa30.09■■■□□ 2.41
PACRGL-220ENST00000508952 PLEKHG2Q9H7P9 1386 aa30.08■■■□□ 2.41
PACRGL-220ENST00000508952 SMARCC1Q92922 1105 aaPredicted RBP30.07■■■□□ 2.4
PACRGL-220ENST00000508952 FHDC1Q9C0D6 1143 aaPredicted RBP30.07■■■□□ 2.4
PACRGL-220ENST00000508952 TMOD3Q9NYL9 352 aa30.07■■■□□ 2.4
PACRGL-220ENST00000508952 CC2D1BQ5T0F9 858 aaKnown RBP30.06■■■□□ 2.4
PACRGL-220ENST00000508952 SLC16A10Q8TF71 515 aa30.06■■■□□ 2.4
PACRGL-220ENST00000508952 COL24A1Q17RW2 1714 aa30.05■■■□□ 2.4
PACRGL-220ENST00000508952 ARXQ96QS3 562 aa30.05■■■□□ 2.4
PACRGL-220ENST00000508952 IL13P35225 146 aa30.04■■■□□ 2.4
PACRGL-220ENST00000508952 C4BP0C0L5 1744 aa30.03■■■□□ 2.4
PACRGL-220ENST00000508952 PLEKHO1Q53GL0 409 aaPredicted RBP30.03■■■□□ 2.4
PACRGL-220ENST00000508952 SYT17Q9BSW7 474 aa30.03■■■□□ 2.4
PACRGL-220ENST00000508952 MTHFSP49914 203 aa30.02■■■□□ 2.4
PACRGL-220ENST00000508952 SULT6B1Q6IMI4 303 aa30.02■■■□□ 2.4
PACRGL-220ENST00000508952 MSH5O43196 834 aa30.01■■■□□ 2.39
PACRGL-220ENST00000508952 CNGB1Q14028 1251 aaPredicted RBP30.01■■■□□ 2.39
PACRGL-220ENST00000508952 ZNF530Q6P9A1 599 aaPredicted RBP30.01■■■□□ 2.39
PACRGL-220ENST00000508952 COL23A1Q86Y22 540 aaPredicted RBP30.01■■■□□ 2.39
PACRGL-220ENST00000508952 ASAP1Q9ULH1 1129 aa30.01■■■□□ 2.39
PACRGL-220ENST00000508952 DCAF8L1A6NGE4 600 aa29.99■■■□□ 2.39
PACRGL-220ENST00000508952 KDRP35968 1356 aa29.99■■■□□ 2.39
PACRGL-220ENST00000508952 KDM6AO15550 1401 aaPredicted RBP29.98■■■□□ 2.39
PACRGL-220ENST00000508952 LOC102724428A0A0B4J2F2 783 aa29.98■■■□□ 2.39
PACRGL-220ENST00000508952 SIK1P57059 783 aa29.98■■■□□ 2.39
PACRGL-220ENST00000508952 AMOTQ4VCS5 1084 aa29.98■■■□□ 2.39
PACRGL-220ENST00000508952 POLD1P28340 1107 aa29.97■■■□□ 2.39
PACRGL-220ENST00000508952 DCAF5Q96JK2 942 aa29.97■■■□□ 2.39
PACRGL-220ENST00000508952 UBR3Q6ZT12 1888 aa29.96■■■□□ 2.39
PACRGL-220ENST00000508952 HSP90AB1P08238 724 aaKnown RBP29.96■■■□□ 2.39
PACRGL-220ENST00000508952 ERVV-2B6SEH9 535 aa29.95■■■□□ 2.39
PACRGL-220ENST00000508952 AK7Q96M32 723 aa29.95■■■□□ 2.39
PACRGL-220ENST00000508952 ATG3Q9NT62 314 aa29.95■■■□□ 2.39
PACRGL-220ENST00000508952 HMGB2P26583 209 aaKnown RBP29.94■■■□□ 2.38
PACRGL-220ENST00000508952 LINC00116Q8NCU8 138 aa29.94■■■□□ 2.38
PACRGL-220ENST00000508952 MAP3K5Q99683 1374 aa29.93■■■□□ 2.38
PACRGL-220ENST00000508952 NPC1L1Q9UHC9 1359 aa29.93■■■□□ 2.38
PACRGL-220ENST00000508952 C1orf141Q5JVX7 400 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms