RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 UNC5CLQ8IV45 518 aa12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
COL4A3BP-206ENST00000508809 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
COL4A3BP-206ENST00000508809 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
COL4A3BP-206ENST00000508809 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
COL4A3BP-206ENST00000508809 YTHDC2Q9H6S0 1430 aaKnown RBP12.83□□□□□ -0.36
COL4A3BP-206ENST00000508809 C6orf132Q5T0Z8 1188 aa12.83□□□□□ -0.36
COL4A3BP-206ENST00000508809 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
COL4A3BP-206ENST00000508809 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
COL4A3BP-206ENST00000508809 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
COL4A3BP-206ENST00000508809 SMYD5Q6GMV2 418 aa12.82□□□□□ -0.36
COL4A3BP-206ENST00000508809 KIF1AQ12756 1690 aa12.82□□□□□ -0.36
COL4A3BP-206ENST00000508809 GLI3P10071 1580 aa12.81□□□□□ -0.36
COL4A3BP-206ENST00000508809 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
COL4A3BP-206ENST00000508809 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
COL4A3BP-206ENST00000508809 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
COL4A3BP-206ENST00000508809 SLC4A5Q9BY07 1137 aa12.81□□□□□ -0.36
COL4A3BP-206ENST00000508809 PSME1Q06323 249 aa12.8□□□□□ -0.36
COL4A3BP-206ENST00000508809 BRWD3Q6RI45 1802 aa12.8□□□□□ -0.36
COL4A3BP-206ENST00000508809 NRXN1Q9ULB1 1477 aa12.79□□□□□ -0.36
COL4A3BP-206ENST00000508809 VPS72Q15906 364 aa12.79□□□□□ -0.36
COL4A3BP-206ENST00000508809 USP32Q8NFA0 1604 aa12.79□□□□□ -0.36
COL4A3BP-206ENST00000508809 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
COL4A3BP-206ENST00000508809 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
COL4A3BP-206ENST00000508809 BLMP54132 1417 aaPredicted RBP12.79□□□□□ -0.36
COL4A3BP-206ENST00000508809 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
COL4A3BP-206ENST00000508809 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
COL4A3BP-206ENST00000508809 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
COL4A3BP-206ENST00000508809 SEMA3EO15041 775 aa12.77□□□□□ -0.37
COL4A3BP-206ENST00000508809 OSBPP22059 807 aa12.77□□□□□ -0.37
COL4A3BP-206ENST00000508809 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.37
COL4A3BP-206ENST00000508809 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
COL4A3BP-206ENST00000508809 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
COL4A3BP-206ENST00000508809 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-206ENST00000508809 MLLT3P42568 568 aaPredicted RBP12.76□□□□□ -0.37
COL4A3BP-206ENST00000508809 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
COL4A3BP-206ENST00000508809 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
COL4A3BP-206ENST00000508809 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
COL4A3BP-206ENST00000508809 ARHGEF10O15013 1369 aa12.75□□□□□ -0.37
COL4A3BP-206ENST00000508809 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
COL4A3BP-206ENST00000508809 PRAM1Q96QH2 718 aa12.75□□□□□ -0.37
COL4A3BP-206ENST00000508809 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
COL4A3BP-206ENST00000508809 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
COL4A3BP-206ENST00000508809 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
COL4A3BP-206ENST00000508809 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
COL4A3BP-206ENST00000508809 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
COL4A3BP-206ENST00000508809 COL9A1P20849 921 aa12.73□□□□□ -0.37
COL4A3BP-206ENST00000508809 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
COL4A3BP-206ENST00000508809 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
COL4A3BP-206ENST00000508809 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL4A3BP-206ENST00000508809 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
COL4A3BP-206ENST00000508809 PLCH1Q4KWH8 1693 aa12.72□□□□□ -0.37
COL4A3BP-206ENST00000508809 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
COL4A3BP-206ENST00000508809 SF3B2Q13435 895 aaKnown RBP12.71□□□□□ -0.37
COL4A3BP-206ENST00000508809 LMOD2Q6P5Q4 547 aa12.71□□□□□ -0.37
COL4A3BP-206ENST00000508809 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
COL4A3BP-206ENST00000508809 POGKQ9P215 609 aa12.71□□□□□ -0.37
COL4A3BP-206ENST00000508809 ADGRB2O60241 1585 aa12.7□□□□□ -0.38
COL4A3BP-206ENST00000508809 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
COL4A3BP-206ENST00000508809 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
COL4A3BP-206ENST00000508809 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
COL4A3BP-206ENST00000508809 TRPM3Q9HCF6 1732 aaPredicted RBP12.7□□□□□ -0.38
COL4A3BP-206ENST00000508809 ADGRB1O14514 1584 aa12.69□□□□□ -0.38
COL4A3BP-206ENST00000508809 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
COL4A3BP-206ENST00000508809 HRO43593 1189 aa12.69□□□□□ -0.38
COL4A3BP-206ENST00000508809 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
COL4A3BP-206ENST00000508809 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 BTG4Q9NY30 223 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
COL4A3BP-206ENST00000508809 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
COL4A3BP-206ENST00000508809 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
COL4A3BP-206ENST00000508809 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
COL4A3BP-206ENST00000508809 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
COL4A3BP-206ENST00000508809 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
COL4A3BP-206ENST00000508809 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
COL4A3BP-206ENST00000508809 BAG6P46379 1132 aa12.66□□□□□ -0.38
COL4A3BP-206ENST00000508809 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
COL4A3BP-206ENST00000508809 EIF3AQ14152 1382 aaKnown RBP12.66□□□□□ -0.38
COL4A3BP-206ENST00000508809 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
COL4A3BP-206ENST00000508809 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
COL4A3BP-206ENST00000508809 PRSS12P56730 875 aa12.65□□□□□ -0.38
COL4A3BP-206ENST00000508809 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
COL4A3BP-206ENST00000508809 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
COL4A3BP-206ENST00000508809 LRP5O75197 1615 aa12.65□□□□□ -0.38
COL4A3BP-206ENST00000508809 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
COL4A3BP-206ENST00000508809 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
COL4A3BP-206ENST00000508809 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
COL4A3BP-206ENST00000508809 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
COL4A3BP-206ENST00000508809 CRYBG1Q9Y4K1 1723 aa12.64□□□□□ -0.39
COL4A3BP-206ENST00000508809 RAB3GAP2Q9H2M9 1393 aa12.64□□□□□ -0.39
COL4A3BP-206ENST00000508809 HRCP23327 699 aa12.63□□□□□ -0.39
COL4A3BP-206ENST00000508809 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms