RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 MYT1Q01538 1121 aa20.99■□□□□ 0.95
NFKB1-207ENST00000508584 CHRNA2Q15822 529 aa20.99■□□□□ 0.95
NFKB1-207ENST00000508584 NBPF6Q5VWK0 638 aa20.99■□□□□ 0.95
NFKB1-207ENST00000508584 NBPF4Q96M43 638 aa20.99■□□□□ 0.95
NFKB1-207ENST00000508584 KRT27Q7Z3Y8 459 aa20.98■□□□□ 0.95
NFKB1-207ENST00000508584 TRMT2AQ8IZ69 625 aaKnown RBP20.98■□□□□ 0.95
NFKB1-207ENST00000508584 PRDM11Q9NQV5 511 aa20.98■□□□□ 0.95
NFKB1-207ENST00000508584 LMOD3Q0VAK6 560 aa20.97■□□□□ 0.95
NFKB1-207ENST00000508584 DUSP27Q5VZP5 1158 aa20.97■□□□□ 0.95
NFKB1-207ENST00000508584 USHBP1Q8N6Y0 703 aa20.97■□□□□ 0.95
NFKB1-207ENST00000508584 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
NFKB1-207ENST00000508584 ERBB3P21860 1342 aa20.97■□□□□ 0.95
NFKB1-207ENST00000508584 COL18A1P39060 1754 aa20.97■□□□□ 0.95
NFKB1-207ENST00000508584 NCAPD2Q15021 1401 aa20.95■□□□□ 0.95
NFKB1-207ENST00000508584 FAM98CQ17RN3 349 aaKnown RBP20.95■□□□□ 0.94
NFKB1-207ENST00000508584 SUPT16HQ9Y5B9 1047 aaKnown RBP20.95■□□□□ 0.94
NFKB1-207ENST00000508584 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
NFKB1-207ENST00000508584 IL16Q14005 1332 aa20.95■□□□□ 0.94
NFKB1-207ENST00000508584 COL14A1Q05707 1796 aaKnown RBP20.94■□□□□ 0.94
NFKB1-207ENST00000508584 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
NFKB1-207ENST00000508584 MYH16Q9H6N6 1097 aa20.93■□□□□ 0.94
NFKB1-207ENST00000508584 EP400Q96L91 3159 aa20.92■□□□□ 0.94
NFKB1-207ENST00000508584 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
NFKB1-207ENST00000508584 CALD1Q05682 793 aaKnown RBP20.92■□□□□ 0.94
NFKB1-207ENST00000508584 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
NFKB1-207ENST00000508584 DEFB132Q7Z7B7 95 aa20.92■□□□□ 0.94
NFKB1-207ENST00000508584 CAMTA1Q9Y6Y1 1673 aa20.92■□□□□ 0.94
NFKB1-207ENST00000508584 NRAPQ86VF7 1730 aa20.92■□□□□ 0.94
NFKB1-207ENST00000508584 BRWD3Q6RI45 1802 aa20.91■□□□□ 0.94
NFKB1-207ENST00000508584 NLRP2Q9NX02 1062 aa20.91■□□□□ 0.94
NFKB1-207ENST00000508584 LMO7Q8WWI1 1683 aa20.9■□□□□ 0.94
NFKB1-207ENST00000508584 SPATA31A5Q5VU36 1347 aa20.9■□□□□ 0.94
NFKB1-207ENST00000508584 SPATA31A7Q8IWB4 1347 aa20.9■□□□□ 0.94
NFKB1-207ENST00000508584 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
NFKB1-207ENST00000508584 NEFLP07196 543 aa20.89■□□□□ 0.93
NFKB1-207ENST00000508584 RGPD5Q99666 1765 aa20.89■□□□□ 0.93
NFKB1-207ENST00000508584 BAG6P46379 1132 aa20.87■□□□□ 0.93
NFKB1-207ENST00000508584 THUMPD2Q9BTF0 503 aaKnown RBP20.87■□□□□ 0.93
NFKB1-207ENST00000508584 RGPD2P0DJD1 1756 aa20.87■□□□□ 0.93
NFKB1-207ENST00000508584 COL5A2P05997 1499 aaPredicted RBP20.87■□□□□ 0.93
NFKB1-207ENST00000508584 FAM208AQ9UK61 1670 aaKnown RBP20.86■□□□□ 0.93
NFKB1-207ENST00000508584 WDR17Q8IZU2 1322 aa20.86■□□□□ 0.93
NFKB1-207ENST00000508584 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
NFKB1-207ENST00000508584 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
NFKB1-207ENST00000508584 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
NFKB1-207ENST00000508584 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
NFKB1-207ENST00000508584 RTF1Q92541 710 aaKnown RBP20.85■□□□□ 0.93
NFKB1-207ENST00000508584 RNF123Q5XPI4 1314 aa20.84■□□□□ 0.93
NFKB1-207ENST00000508584 DCTN1Q14203 1278 aa20.84■□□□□ 0.93
NFKB1-207ENST00000508584 STRN4Q9NRL3 753 aa20.84■□□□□ 0.93
NFKB1-207ENST00000508584 IFT57Q9NWB7 429 aa20.84■□□□□ 0.93
NFKB1-207ENST00000508584 MAP3K5Q99683 1374 aa20.84■□□□□ 0.93
NFKB1-207ENST00000508584 SPATA31A1Q5TZJ5 1347 aa20.83■□□□□ 0.93
NFKB1-207ENST00000508584 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.93
NFKB1-207ENST00000508584 EVA1CP58658 441 aa20.83■□□□□ 0.93
NFKB1-207ENST00000508584 GNAI1P63096 354 aa20.83■□□□□ 0.93
NFKB1-207ENST00000508584 MCM10Q7L590 875 aa20.83■□□□□ 0.93
NFKB1-207ENST00000508584 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
NFKB1-207ENST00000508584 TSR2Q969E8 191 aaKnown RBP20.83■□□□□ 0.93
NFKB1-207ENST00000508584 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
NFKB1-207ENST00000508584 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
NFKB1-207ENST00000508584 LAS1LQ9Y4W2 734 aaKnown RBP20.82■□□□□ 0.92
NFKB1-207ENST00000508584 DLG5Q8TDM6 1919 aa20.82■□□□□ 0.92
NFKB1-207ENST00000508584 ZNF853P0CG23 659 aa20.81■□□□□ 0.92
NFKB1-207ENST00000508584 PLEKHG2Q9H7P9 1386 aa20.81■□□□□ 0.92
NFKB1-207ENST00000508584 FKBP8Q14318 412 aa20.8■□□□□ 0.92
NFKB1-207ENST00000508584 FAM182BQ5T319 152 aa20.8■□□□□ 0.92
NFKB1-207ENST00000508584 ZNF530Q6P9A1 599 aaPredicted RBP20.8■□□□□ 0.92
NFKB1-207ENST00000508584 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
NFKB1-207ENST00000508584 CARD10Q9BWT7 1032 aa20.8■□□□□ 0.92
NFKB1-207ENST00000508584 LARP1Q6PKG0 1096 aaKnown RBP20.79■□□□□ 0.92
NFKB1-207ENST00000508584 THSD7AQ9UPZ6 1657 aa20.79■□□□□ 0.92
NFKB1-207ENST00000508584 CRB1P82279 1406 aa20.78■□□□□ 0.92
NFKB1-207ENST00000508584 MEGF6O75095 1541 aa20.78■□□□□ 0.92
NFKB1-207ENST00000508584 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
NFKB1-207ENST00000508584 AKAP4Q5JQC9 854 aa20.78■□□□□ 0.92
NFKB1-207ENST00000508584 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
NFKB1-207ENST00000508584 CT47B1P0C2W7 299 aaPredicted RBP20.77■□□□□ 0.92
NFKB1-207ENST00000508584 EXOSC9Q06265 439 aaKnown RBP20.77■□□□□ 0.92
NFKB1-207ENST00000508584 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
NFKB1-207ENST00000508584 MBIPQ9NS73 344 aa20.77■□□□□ 0.92
NFKB1-207ENST00000508584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.925e-6■■■■□ 22.9
NFKB1-207ENST00000508584 SPG7Q9UQ90 795 aa20.77■□□□□ 0.92
NFKB1-207ENST00000508584 EN1Q05925 392 aaPredicted RBP20.76■□□□□ 0.91
NFKB1-207ENST00000508584 IL17REQ8NFR9 667 aa20.76■□□□□ 0.91
NFKB1-207ENST00000508584 CHL1O00533 1208 aa20.75■□□□□ 0.91
NFKB1-207ENST00000508584 IRX6P78412 446 aaPredicted RBP20.75■□□□□ 0.91
NFKB1-207ENST00000508584 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
NFKB1-207ENST00000508584 BARGINQ6ZT62 677 aa20.75■□□□□ 0.91
NFKB1-207ENST00000508584 OVOS2A0A0G2JMS6 1433 aa20.74■□□□□ 0.91
NFKB1-207ENST00000508584 LRRC37A3O60309 1634 aa20.74■□□□□ 0.91
NFKB1-207ENST00000508584 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
NFKB1-207ENST00000508584 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
NFKB1-207ENST00000508584 DISP2A7MBM2 1401 aa20.71■□□□□ 0.91
NFKB1-207ENST00000508584 TRIM37O94972 964 aa20.71■□□□□ 0.91
NFKB1-207ENST00000508584 IL2RBP14784 551 aa20.71■□□□□ 0.91
NFKB1-207ENST00000508584 RARSP54136 660 aaKnown RBP20.71■□□□□ 0.91
NFKB1-207ENST00000508584 THRAP3Q9Y2W1 955 aaKnown RBP20.71■□□□□ 0.91
NFKB1-207ENST00000508584 SRCAPQ6ZRS2 3230 aa20.7■□□□□ 0.9
NFKB1-207ENST00000508584 MPRIPQ6WCQ1 1025 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms