RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 OVOS2A0A0G2JMS6 1433 aa23.14■■□□□ 1.3
TRIM60-203ENST00000508504 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
TRIM60-203ENST00000508504 THRAP3Q9Y2W1 955 aaKnown RBP23.14■■□□□ 1.29
TRIM60-203ENST00000508504 POTEAQ6S8J7 498 aa23.13■■□□□ 1.29
TRIM60-203ENST00000508504 BARGINQ6ZT62 677 aa23.13■■□□□ 1.29
TRIM60-203ENST00000508504 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
TRIM60-203ENST00000508504 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
TRIM60-203ENST00000508504 PARP4Q9UKK3 1724 aaKnown RBP23.12■■□□□ 1.29
TRIM60-203ENST00000508504 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
TRIM60-203ENST00000508504 NEUROD2Q15784 382 aa23.11■■□□□ 1.29
TRIM60-203ENST00000508504 PNNQ9H307 717 aaKnown RBP23.11■■□□□ 1.29
TRIM60-203ENST00000508504 YTHDC1Q96MU7 727 aaKnown RBP23.1■■□□□ 1.29
TRIM60-203ENST00000508504 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
TRIM60-203ENST00000508504 SHANK3Q9BYB0 1731 aa23.1■■□□□ 1.29
TRIM60-203ENST00000508504 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
TRIM60-203ENST00000508504 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.29
TRIM60-203ENST00000508504 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.29
TRIM60-203ENST00000508504 ZCRB1Q8TBF4 217 aaKnown RBP23.08■■□□□ 1.29
TRIM60-203ENST00000508504 LRRC37A3O60309 1634 aa23.08■■□□□ 1.28
TRIM60-203ENST00000508504 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
TRIM60-203ENST00000508504 CYP27B1O15528 508 aa23.07■■□□□ 1.28
TRIM60-203ENST00000508504 NEFMP07197 916 aa23.07■■□□□ 1.28
TRIM60-203ENST00000508504 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRIM60-203ENST00000508504 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
TRIM60-203ENST00000508504 A0A0G2JS52 829 aa23.06■■□□□ 1.28
TRIM60-203ENST00000508504 ONECUT3O60422 494 aaPredicted RBP23.06■■□□□ 1.28
TRIM60-203ENST00000508504 MYT1Q01538 1121 aa23.06■■□□□ 1.28
TRIM60-203ENST00000508504 AMOTQ4VCS5 1084 aa23.06■■□□□ 1.28
TRIM60-203ENST00000508504 ZNF530Q6P9A1 599 aaPredicted RBP23.06■■□□□ 1.28
TRIM60-203ENST00000508504 RBM6P78332 1123 aaKnown RBP23.06■■□□□ 1.28
TRIM60-203ENST00000508504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRIM60-203ENST00000508504 RIPK4P57078 832 aa23.05■■□□□ 1.28
TRIM60-203ENST00000508504 DDX54Q8TDD1 881 aaKnown RBP23.05■■□□□ 1.28
TRIM60-203ENST00000508504 CDCA7Q9BWT1 371 aaPredicted RBP23.05■■□□□ 1.28
TRIM60-203ENST00000508504 SPG7Q9UQ90 795 aa23.05■■□□□ 1.28
TRIM60-203ENST00000508504 DDB1Q16531 1140 aa23.04■■□□□ 1.28
TRIM60-203ENST00000508504 SEPT12Q8IYM1 358 aa23.04■■□□□ 1.28
TRIM60-203ENST00000508504 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
TRIM60-203ENST00000508504 TNS2Q63HR2 1409 aa23.04■■□□□ 1.28
TRIM60-203ENST00000508504 EXOC5O00471 708 aa23.03■■□□□ 1.28
TRIM60-203ENST00000508504 TRIM35Q9UPQ4 493 aa23.03■■□□□ 1.28
TRIM60-203ENST00000508504 PHKG2P15735 406 aa23.03■■□□□ 1.28
TRIM60-203ENST00000508504 RXRBP28702 533 aa23.03■■□□□ 1.28
TRIM60-203ENST00000508504 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
TRIM60-203ENST00000508504 THUMPD2Q9BTF0 503 aaKnown RBP23.02■■□□□ 1.28
TRIM60-203ENST00000508504 PLEKHG2Q9H7P9 1386 aa23.02■■□□□ 1.28
TRIM60-203ENST00000508504 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
TRIM60-203ENST00000508504 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
TRIM60-203ENST00000508504 MPRIPQ6WCQ1 1025 aa23■■□□□ 1.27
TRIM60-203ENST00000508504 MCM10Q7L590 875 aa23■■□□□ 1.27
TRIM60-203ENST00000508504 MARCH10Q8NA82 808 aaPredicted RBP23■■□□□ 1.27
TRIM60-203ENST00000508504 MAP3K5Q99683 1374 aa23■■□□□ 1.27
TRIM60-203ENST00000508504 AKAP4Q5JQC9 854 aa23■■□□□ 1.27
TRIM60-203ENST00000508504 FAM182BQ5T319 152 aa23■■□□□ 1.27
TRIM60-203ENST00000508504 LGR6Q9HBX8 967 aa23■■□□□ 1.27
TRIM60-203ENST00000508504 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
TRIM60-203ENST00000508504 C1orf141Q5JVX7 400 aa22.99■■□□□ 1.27
TRIM60-203ENST00000508504 IFNL2Q8IZJ0 200 aa22.99■■□□□ 1.27
TRIM60-203ENST00000508504 BRWD3Q6RI45 1802 aa22.98■■□□□ 1.27
TRIM60-203ENST00000508504 IL17REQ8NFR9 667 aa22.98■■□□□ 1.27
TRIM60-203ENST00000508504 WWC1Q8IX03 1113 aa22.97■■□□□ 1.27
TRIM60-203ENST00000508504 RGS12O14924 1447 aa22.97■■□□□ 1.27
TRIM60-203ENST00000508504 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
TRIM60-203ENST00000508504 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
TRIM60-203ENST00000508504 ZNF521Q96K83 1311 aa22.95■■□□□ 1.26
TRIM60-203ENST00000508504 PDE3BQ13370 1112 aa22.94■■□□□ 1.26
TRIM60-203ENST00000508504 NKX1-1Q15270 411 aaPredicted RBP22.93■■□□□ 1.26
TRIM60-203ENST00000508504 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
TRIM60-203ENST00000508504 RTF1Q92541 710 aaKnown RBP22.93■■□□□ 1.26
TRIM60-203ENST00000508504 TOGARAM1Q9Y4F4 1720 aa22.93■■□□□ 1.26
TRIM60-203ENST00000508504 ADAMTS7Q9UKP4 1686 aa22.92■■□□□ 1.26
TRIM60-203ENST00000508504 SCN11AQ9UI33 1791 aa22.92■■□□□ 1.26
TRIM60-203ENST00000508504 RNMTO43148 476 aaKnown RBP22.92■■□□□ 1.26
TRIM60-203ENST00000508504 DCAF5Q96JK2 942 aa22.92■■□□□ 1.26
TRIM60-203ENST00000508504 CEMIPQ8WUJ3 1361 aa22.92■■□□□ 1.26
TRIM60-203ENST00000508504 KAT6BQ8WYB5 2073 aa22.92■■□□□ 1.26
TRIM60-203ENST00000508504 SPINK5Q9NQ38 1064 aaPredicted RBP22.91■■□□□ 1.26
TRIM60-203ENST00000508504 HTATSF1O43719 755 aaKnown RBP22.9■■□□□ 1.26
TRIM60-203ENST00000508504 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
TRIM60-203ENST00000508504 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
TRIM60-203ENST00000508504 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
TRIM60-203ENST00000508504 KRT27Q7Z3Y8 459 aa22.9■■□□□ 1.26
TRIM60-203ENST00000508504 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
TRIM60-203ENST00000508504 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
TRIM60-203ENST00000508504 NGEFQ8N5V2 710 aa22.88■■□□□ 1.25
TRIM60-203ENST00000508504 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
TRIM60-203ENST00000508504 DOT1LQ8TEK3 1739 aa22.87■■□□□ 1.25
TRIM60-203ENST00000508504 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
TRIM60-203ENST00000508504 MIS18AQ9NYP9 233 aa22.87■■□□□ 1.25
TRIM60-203ENST00000508504 PTF1AQ7RTS3 328 aa22.86■■□□□ 1.25
TRIM60-203ENST00000508504 KCNQ2O43526 872 aa22.85■■□□□ 1.25
TRIM60-203ENST00000508504 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
TRIM60-203ENST00000508504 WDR63Q8IWG1 891 aa22.84■■□□□ 1.25
TRIM60-203ENST00000508504 SLC52A2Q9HAB3 445 aa22.84■■□□□ 1.25
TRIM60-203ENST00000508504 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
TRIM60-203ENST00000508504 ITGB4P16144 1822 aa22.84■■□□□ 1.25
TRIM60-203ENST00000508504 SIPA1L3O60292 1781 aaPredicted RBP22.84■■□□□ 1.25
TRIM60-203ENST00000508504 TEFQ10587 303 aa22.84■■□□□ 1.25
TRIM60-203ENST00000508504 SYTL4Q96C24 671 aaPredicted RBP22.84■■□□□ 1.25
TRIM60-203ENST00000508504 MRC1P22897 1456 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms