RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
USP46-207ENST00000508499 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
USP46-207ENST00000508499 ATRNO75882 1429 aa11.54□□□□□ -0.56
USP46-207ENST00000508499 FCHSD2O94868 740 aa11.54□□□□□ -0.56
USP46-207ENST00000508499 VPS72Q15906 364 aa11.54□□□□□ -0.56
USP46-207ENST00000508499 THRAP3Q9Y2W1 955 aaKnown RBP11.54□□□□□ -0.56
USP46-207ENST00000508499 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
USP46-207ENST00000508499 SHANK3Q9BYB0 1731 aa11.53□□□□□ -0.56
USP46-207ENST00000508499 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
USP46-207ENST00000508499 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
USP46-207ENST00000508499 EYA1Q99502 592 aa11.53□□□□□ -0.56
USP46-207ENST00000508499 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
USP46-207ENST00000508499 GLI3P10071 1580 aa11.53□□□□□ -0.56
USP46-207ENST00000508499 DISP2A7MBM2 1401 aa11.53□□□□□ -0.56
USP46-207ENST00000508499 PRR29P0C7W0 189 aa11.52□□□□□ -0.56
USP46-207ENST00000508499 NBPF6Q5VWK0 638 aa11.52□□□□□ -0.56
USP46-207ENST00000508499 NBPF4Q96M43 638 aa11.52□□□□□ -0.56
USP46-207ENST00000508499 C8orf37Q96NL8 207 aa11.52□□□□□ -0.56
USP46-207ENST00000508499 DLG5Q8TDM6 1919 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 VIRMAQ69YN4 1812 aaKnown RBP11.52□□□□□ -0.57
USP46-207ENST00000508499 AFF2P51816 1311 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 SPATA31A1Q5TZJ5 1347 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 SPATA31A5Q5VU36 1347 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 SPATA31A7Q8IWB4 1347 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
USP46-207ENST00000508499 ZNF772Q68DY9 489 aaPredicted RBP11.52□□□□□ -0.57
USP46-207ENST00000508499 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
USP46-207ENST00000508499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.57
USP46-207ENST00000508499 USP21Q9UK80 565 aa11.52□□□□□ -0.57
USP46-207ENST00000508499 ADAMTS7Q9UKP4 1686 aa11.51□□□□□ -0.57
USP46-207ENST00000508499 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
USP46-207ENST00000508499 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
USP46-207ENST00000508499 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
USP46-207ENST00000508499 EVA1CP58658 441 aa11.51□□□□□ -0.57
USP46-207ENST00000508499 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP46-207ENST00000508499 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
USP46-207ENST00000508499 PLEKHF1Q96S99 279 aa11.51□□□□□ -0.57
USP46-207ENST00000508499 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
USP46-207ENST00000508499 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
USP46-207ENST00000508499 OVOS2A0A0G2JMS6 1433 aa11.5□□□□□ -0.57
USP46-207ENST00000508499 TOM1L2Q6ZVM7 507 aa11.5□□□□□ -0.57
USP46-207ENST00000508499 NGEFQ8N5V2 710 aa11.5□□□□□ -0.57
USP46-207ENST00000508499 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
USP46-207ENST00000508499 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
USP46-207ENST00000508499 ZBTB7CA1YPR0 619 aa11.49□□□□□ -0.57
USP46-207ENST00000508499 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
USP46-207ENST00000508499 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP46-207ENST00000508499 TCP11L2Q8N4U5 519 aa11.49□□□□□ -0.57
USP46-207ENST00000508499 MEGF6O75095 1541 aa11.48□□□□□ -0.57
USP46-207ENST00000508499 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
USP46-207ENST00000508499 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
USP46-207ENST00000508499 SULT6B1Q6IMI4 303 aa11.48□□□□□ -0.57
USP46-207ENST00000508499 STRN4Q9NRL3 753 aa11.48□□□□□ -0.57
USP46-207ENST00000508499 NLRP2Q9NX02 1062 aa11.48□□□□□ -0.57
USP46-207ENST00000508499 SCN11AQ9UI33 1791 aa11.47□□□□□ -0.57
USP46-207ENST00000508499 IL2RBP14784 551 aa11.47□□□□□ -0.57
USP46-207ENST00000508499 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
USP46-207ENST00000508499 LTV1Q96GA3 475 aaPredicted RBP11.47□□□□□ -0.57
USP46-207ENST00000508499 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
USP46-207ENST00000508499 TNS2Q63HR2 1409 aa11.46□□□□□ -0.57
USP46-207ENST00000508499 AMOTQ4VCS5 1084 aa11.46□□□□□ -0.57
USP46-207ENST00000508499 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.57
USP46-207ENST00000508499 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
USP46-207ENST00000508499 BCL9O00512 1426 aa11.45□□□□□ -0.58
USP46-207ENST00000508499 SIPA1L3O60292 1781 aaPredicted RBP11.45□□□□□ -0.58
USP46-207ENST00000508499 BRWD3Q6RI45 1802 aa11.45□□□□□ -0.58
USP46-207ENST00000508499 NEFMP07197 916 aa11.44□□□□□ -0.58
USP46-207ENST00000508499 HMOX1P09601 288 aa11.44□□□□□ -0.58
USP46-207ENST00000508499 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
USP46-207ENST00000508499 PRKAR2BP31323 418 aa11.44□□□□□ -0.58
USP46-207ENST00000508499 QTRT2Q9H974 415 aaKnown RBP11.44□□□□□ -0.58
USP46-207ENST00000508499 RGS17Q9UGC6 210 aaPredicted RBP11.44□□□□□ -0.58
USP46-207ENST00000508499 RBM6P78332 1123 aaKnown RBP11.43□□□□□ -0.58
USP46-207ENST00000508499 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 GAS2L2Q8NHY3 880 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
USP46-207ENST00000508499 PLEKHO1Q53GL0 409 aaPredicted RBP11.43□□□□□ -0.58
USP46-207ENST00000508499 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 PHACTR3Q96KR7 559 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
USP46-207ENST00000508499 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
USP46-207ENST00000508499 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
USP46-207ENST00000508499 NKX1-1Q15270 411 aaPredicted RBP11.42□□□□□ -0.58
USP46-207ENST00000508499 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
USP46-207ENST00000508499 MRC1P22897 1456 aa11.42□□□□□ -0.58
USP46-207ENST00000508499 ITGB4P16144 1822 aa11.41□□□□□ -0.58
USP46-207ENST00000508499 TMPOP42166 694 aaKnown RBP11.41□□□□□ -0.58
USP46-207ENST00000508499 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
USP46-207ENST00000508499 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
USP46-207ENST00000508499 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
USP46-207ENST00000508499 CEMIPQ8WUJ3 1361 aa11.4□□□□□ -0.58
USP46-207ENST00000508499 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
USP46-207ENST00000508499 MTHFSDQ2M296 383 aaKnown RBP11.4□□□□□ -0.58
USP46-207ENST00000508499 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
USP46-207ENST00000508499 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms