RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
HTT-204ENST00000508321 TATP17735 454 aaPredicted RBP13.66□□□□□ -0.22
HTT-204ENST00000508321 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
HTT-204ENST00000508321 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
HTT-204ENST00000508321 SULT6B1Q6IMI4 303 aa13.66□□□□□ -0.22
HTT-204ENST00000508321 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
HTT-204ENST00000508321 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
HTT-204ENST00000508321 USHBP1Q8N6Y0 703 aa13.65□□□□□ -0.22
HTT-204ENST00000508321 BCL9O00512 1426 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 A0A0G2JS52 829 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 NEFMP07197 916 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 MYT1Q01538 1121 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 DDB1Q16531 1140 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
HTT-204ENST00000508321 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
HTT-204ENST00000508321 AEBP1Q8IUX7 1158 aa13.63□□□□□ -0.23
HTT-204ENST00000508321 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
HTT-204ENST00000508321 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
HTT-204ENST00000508321 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
HTT-204ENST00000508321 HMOX1P09601 288 aa13.62□□□□□ -0.23
HTT-204ENST00000508321 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
HTT-204ENST00000508321 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
HTT-204ENST00000508321 NHSQ6T4R5 1651 aa13.61□□□□□ -0.23
HTT-204ENST00000508321 EXOC5O00471 708 aa13.61□□□□□ -0.23
HTT-204ENST00000508321 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
HTT-204ENST00000508321 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
HTT-204ENST00000508321 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
HTT-204ENST00000508321 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
HTT-204ENST00000508321 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
HTT-204ENST00000508321 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
HTT-204ENST00000508321 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
HTT-204ENST00000508321 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
HTT-204ENST00000508321 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
HTT-204ENST00000508321 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
HTT-204ENST00000508321 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
HTT-204ENST00000508321 KRT27Q7Z3Y8 459 aa13.59□□□□□ -0.23
HTT-204ENST00000508321 MIER1Q8N108 512 aa13.59□□□□□ -0.23
HTT-204ENST00000508321 TOGARAM1Q9Y4F4 1720 aa13.59□□□□□ -0.23
HTT-204ENST00000508321 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
HTT-204ENST00000508321 MRC1P22897 1456 aa13.58□□□□□ -0.24
HTT-204ENST00000508321 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
HTT-204ENST00000508321 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
HTT-204ENST00000508321 ZNF530Q6P9A1 599 aaPredicted RBP13.57□□□□□ -0.24
HTT-204ENST00000508321 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
HTT-204ENST00000508321 RUNDC1Q96C34 613 aa13.57□□□□□ -0.24
HTT-204ENST00000508321 ADAMTS8Q9UP79 889 aa13.57□□□□□ -0.24
HTT-204ENST00000508321 RGPD3A6NKT7 1758 aaPredicted RBP13.57□□□□□ -0.24
HTT-204ENST00000508321 RGPD4Q7Z3J3 1758 aa13.57□□□□□ -0.24
HTT-204ENST00000508321 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
HTT-204ENST00000508321 TNS1Q9HBL0 1735 aaKnown RBP13.56□□□□□ -0.24
HTT-204ENST00000508321 ITGB4P16144 1822 aa13.55□□□□□ -0.24
HTT-204ENST00000508321 PHKG2P15735 406 aa13.55□□□□□ -0.24
HTT-204ENST00000508321 LMOD3Q0VAK6 560 aa13.55□□□□□ -0.24
HTT-204ENST00000508321 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
HTT-204ENST00000508321 FAM196AQ6ZSG2 479 aa13.55□□□□□ -0.24
HTT-204ENST00000508321 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
HTT-204ENST00000508321 CYP27B1O15528 508 aa13.54□□□□□ -0.24
HTT-204ENST00000508321 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
HTT-204ENST00000508321 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
HTT-204ENST00000508321 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
HTT-204ENST00000508321 KDM6AO15550 1401 aaPredicted RBP13.54□□□□□ -0.24
HTT-204ENST00000508321 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
HTT-204ENST00000508321 NFE2L2Q16236 605 aa13.53□□□□□ -0.24
HTT-204ENST00000508321 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
HTT-204ENST00000508321 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
HTT-204ENST00000508321 DCAF5Q96JK2 942 aa13.53□□□□□ -0.24
HTT-204ENST00000508321 BTAF1O14981 1849 aa13.53□□□□□ -0.24
HTT-204ENST00000508321 EP400Q96L91 3159 aa13.53□□□□□ -0.24
HTT-204ENST00000508321 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
HTT-204ENST00000508321 PHACTR3Q96KR7 559 aa13.52□□□□□ -0.25
HTT-204ENST00000508321 PAPPAQ13219 1627 aa13.52□□□□□ -0.25
HTT-204ENST00000508321 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
HTT-204ENST00000508321 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
HTT-204ENST00000508321 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
HTT-204ENST00000508321 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
HTT-204ENST00000508321 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
HTT-204ENST00000508321 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
HTT-204ENST00000508321 TMPOP42166 694 aaKnown RBP13.49□□□□□ -0.25
HTT-204ENST00000508321 ZNF831Q5JPB2 1677 aa13.49□□□□□ -0.25
HTT-204ENST00000508321 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
HTT-204ENST00000508321 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
HTT-204ENST00000508321 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
HTT-204ENST00000508321 LY75O60449 1722 aa13.48□□□□□ -0.25
HTT-204ENST00000508321 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
HTT-204ENST00000508321 APAF1O14727 1248 aa13.47□□□□□ -0.25
HTT-204ENST00000508321 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
HTT-204ENST00000508321 RIPK4P57078 832 aa13.47□□□□□ -0.25
HTT-204ENST00000508321 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
HTT-204ENST00000508321 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
HTT-204ENST00000508321 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
HTT-204ENST00000508321 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
HTT-204ENST00000508321 RREB1Q92766 1687 aa13.45□□□□□ -0.26
HTT-204ENST00000508321 TEFQ10587 303 aa13.45□□□□□ -0.26
HTT-204ENST00000508321 MPRIPQ6WCQ1 1025 aa13.45□□□□□ -0.26
HTT-204ENST00000508321 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
HTT-204ENST00000508321 SRCAPQ6ZRS2 3230 aa13.45□□□□□ -0.26
HTT-204ENST00000508321 CABP4P57796 275 aa13.44□□□□□ -0.26
HTT-204ENST00000508321 FAM182BQ5T319 152 aa13.44□□□□□ -0.26
HTT-204ENST00000508321 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms