RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 PDZRN3Q9UPQ7 1066 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 AMOTL2Q9Y2J4 779 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 NINLQ9Y2I6 1382 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 CBX1P83916 185 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 ZNF287Q9HBT7 754 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 MYO1BO43795 1136 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 ZSCAN25Q6NSZ9 544 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 PNISRQ8TF01 805 aaKnown RBP9.51□□□□□ -0.89
PDE6A-202ENST00000508173 RIPK4P57078 832 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 MAP7D2Q96T17 732 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 BIN2Q9UBW5 565 aaPredicted RBP9.51□□□□□ -0.89
PDE6A-202ENST00000508173 ABCC10Q5T3U5 1492 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 TEX35Q5T0J7 233 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 CCDC30Q5VVM6 783 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
PDE6A-202ENST00000508173 ESPNB1AK53 854 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 DAPK1P53355 1430 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 DZIP1LQ8IYY4 767 aaKnown RBP9.5□□□□□ -0.89
PDE6A-202ENST00000508173 BICD2Q8TD16 824 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 KRT28Q7Z3Y7 464 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 RUFY1Q96T51 708 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 MAGEC2Q9UBF1 373 aaPredicted RBP9.5□□□□□ -0.89
PDE6A-202ENST00000508173 ERICH4A6NGS2 130 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 ATP10BO94823 1461 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 DHX29Q7Z478 1369 aaKnown RBP9.5□□□□□ -0.89
PDE6A-202ENST00000508173 OLFM4Q6UX06 510 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 HOMER1Q86YM7 354 aa9.5□□□□□ -0.89
PDE6A-202ENST00000508173 CHD1O14646 1710 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 ERBINQ96RT1 1412 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 PCF11O94913 1555 aaKnown RBP9.49□□□□□ -0.89
PDE6A-202ENST00000508173 TIAM1Q13009 1591 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 CCDC57Q2TAC2 916 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 CDCA7Q9BWT1 371 aaPredicted RBP9.49□□□□□ -0.89
PDE6A-202ENST00000508173 FSD1Q9BTV5 496 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 TSPY26PQ9H489 355 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
PDE6A-202ENST00000508173 CCDC73Q6ZRK6 1079 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 DNAJC2Q99543 621 aaKnown RBP9.49□□□□□ -0.89
PDE6A-202ENST00000508173 ZHX3Q9H4I2 956 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
PDE6A-202ENST00000508173 EHMT1Q9H9B1 1298 aa9.49□□□□□ -0.89
PDE6A-202ENST00000508173 ABCA5Q8WWZ7 1642 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 PSMA5P28066 241 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 ANKIB1Q9P2G1 1089 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 MTHFSP49914 203 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
PDE6A-202ENST00000508173 QTRT2Q9H974 415 aaKnown RBP9.48□□□□□ -0.89
PDE6A-202ENST00000508173 ATP10AO60312 1499 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
PDE6A-202ENST00000508173 SKIDA1Q1XH10 827 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 SMARCC1Q92922 1105 aaPredicted RBP9.48□□□□□ -0.89
PDE6A-202ENST00000508173 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 RAI14Q9P0K7 980 aa9.48□□□□□ -0.89
PDE6A-202ENST00000508173 ITSN2Q9NZM3 1697 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 NUCB2P80303 420 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 BMP2KQ9NSY1 1161 aaPredicted RBP9.47□□□□□ -0.89
PDE6A-202ENST00000508173 A2MP01023 1474 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 NEO1Q92859 1461 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 HIP1O00291 1037 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
PDE6A-202ENST00000508173 XPCQ01831 940 aaPredicted RBP9.47□□□□□ -0.89
PDE6A-202ENST00000508173 ATF7IPQ6VMQ6 1270 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 PTPRKQ15262 1439 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 UHRF1BP1LA0JNW5 1464 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 VPS37CA5D8V6 355 aaPredicted RBP9.47□□□□□ -0.89
PDE6A-202ENST00000508173 DDX19BQ9UMR2 479 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 MCM4P33991 863 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
PDE6A-202ENST00000508173 ZNF622Q969S3 477 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDE6A-202ENST00000508173 TFCP2L1Q9NZI6 479 aa9.47□□□□□ -0.89
PDE6A-202ENST00000508173 C20orf194Q5TEA3 1177 aa9.46□□□□□ -0.89
PDE6A-202ENST00000508173 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.89
PDE6A-202ENST00000508173 PABPN1LA6NDY0 278 aaKnown RBP9.46□□□□□ -0.89
PDE6A-202ENST00000508173 HMOX1P09601 288 aa9.46□□□□□ -0.89
PDE6A-202ENST00000508173 CNTROBQ8N137 903 aa9.46□□□□□ -0.89
PDE6A-202ENST00000508173 FOXO3O43524 673 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 CAVIN4Q5BKX8 364 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 NEFHP12036 1026 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 GRIPAP1Q4V328 841 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 TRIM22Q8IYM9 498 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 PRAM1Q96QH2 718 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 FEZ1Q99689 392 aa9.46□□□□□ -0.9
PDE6A-202ENST00000508173 TARBP1Q13395 1621 aaKnown RBP9.46□□□□□ -0.9
PDE6A-202ENST00000508173 CUL5Q93034 780 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 CCDC69A6NI79 296 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 ST5P78524 1137 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 DDB1Q16531 1140 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 SMC3Q9UQE7 1217 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 ZFYVE16Q7Z3T8 1539 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 APBA3O96018 575 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 GNAI3P08754 354 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms