RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
HOXC4-203ENST00000507650 FLT4P35916 1363 aa22.39■■□□□ 1.18
HOXC4-203ENST00000507650 TXNRD1Q16881 649 aa22.39■■□□□ 1.17
HOXC4-203ENST00000507650 NCAPD2Q15021 1401 aa22.39■■□□□ 1.17
HOXC4-203ENST00000507650 NSD2O96028 1365 aa22.38■■□□□ 1.17
HOXC4-203ENST00000507650 EIF4G2P78344 907 aaKnown RBP eCLIP22.38■■□□□ 1.17
HOXC4-203ENST00000507650 NBPF14Q5TI25 921 aa22.38■■□□□ 1.17
HOXC4-203ENST00000507650 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
HOXC4-203ENST00000507650 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
HOXC4-203ENST00000507650 ITGB4P16144 1822 aa22.36■■□□□ 1.17
HOXC4-203ENST00000507650 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
HOXC4-203ENST00000507650 QSER1Q2KHR3 1735 aa22.34■■□□□ 1.17
HOXC4-203ENST00000507650 SMG6Q86US8 1419 aaKnown RBP22.33■■□□□ 1.17
HOXC4-203ENST00000507650 CGNL1Q0VF96 1302 aa22.32■■□□□ 1.16
HOXC4-203ENST00000507650 ZCRB1Q8TBF4 217 aaKnown RBP22.32■■□□□ 1.16
HOXC4-203ENST00000507650 LRRC4BQ9NT99 713 aa22.32■■□□□ 1.16
HOXC4-203ENST00000507650 POLKQ9UBT6 870 aa22.3■■□□□ 1.16
HOXC4-203ENST00000507650 PANK3Q9H999 370 aa22.29■■□□□ 1.16
HOXC4-203ENST00000507650 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
HOXC4-203ENST00000507650 PRIM1P49642 420 aaKnown RBP22.28■■□□□ 1.16
HOXC4-203ENST00000507650 COL24A1Q17RW2 1714 aa22.28■■□□□ 1.16
HOXC4-203ENST00000507650 WASHC2AQ641Q2 1341 aa22.28■■□□□ 1.16
HOXC4-203ENST00000507650 SLC15A2Q16348 729 aa22.27■■□□□ 1.16
HOXC4-203ENST00000507650 ZNF827Q17R98 1081 aa22.27■■□□□ 1.16
HOXC4-203ENST00000507650 PPM1GO15355 546 aaPredicted RBP22.25■■□□□ 1.15
HOXC4-203ENST00000507650 KCNQ4P56696 695 aa22.25■■□□□ 1.15
HOXC4-203ENST00000507650 C5P01031 1676 aa22.24■■□□□ 1.15
HOXC4-203ENST00000507650 CYP27B1O15528 508 aa22.24■■□□□ 1.15
HOXC4-203ENST00000507650 TNNT2P45379 298 aaPredicted RBP22.24■■□□□ 1.15
HOXC4-203ENST00000507650 RAPGEF4Q8WZA2 1011 aa22.24■■□□□ 1.15
HOXC4-203ENST00000507650 EYA1Q99502 592 aa22.24■■□□□ 1.15
HOXC4-203ENST00000507650 SPON1Q9HCB6 807 aa22.24■■□□□ 1.15
HOXC4-203ENST00000507650 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
HOXC4-203ENST00000507650 TATP17735 454 aaPredicted RBP22.23■■□□□ 1.15
HOXC4-203ENST00000507650 STK32BQ9NY57 414 aa22.23■■□□□ 1.15
HOXC4-203ENST00000507650 KIF7Q2M1P5 1343 aa22.23■■□□□ 1.15
HOXC4-203ENST00000507650 PTGER2P43116 358 aa22.22■■□□□ 1.15
HOXC4-203ENST00000507650 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
HOXC4-203ENST00000507650 AKT1S1Q96B36 256 aa22.21■■□□□ 1.15
HOXC4-203ENST00000507650 SYTL4Q96C24 671 aaPredicted RBP22.21■■□□□ 1.15
HOXC4-203ENST00000507650 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
HOXC4-203ENST00000507650 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
HOXC4-203ENST00000507650 SGIP1Q9BQI5 828 aa22.19■■□□□ 1.14
HOXC4-203ENST00000507650 ATF5Q9Y2D1 282 aaPredicted RBP22.18■■□□□ 1.14
HOXC4-203ENST00000507650 SLC27A3Q5K4L6 730 aa22.16■■□□□ 1.14
HOXC4-203ENST00000507650 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
HOXC4-203ENST00000507650 AMER1Q5JTC6 1135 aaPredicted RBP22.15■■□□□ 1.14
HOXC4-203ENST00000507650 PNPLA7Q6ZV29 1317 aa22.14■■□□□ 1.14
HOXC4-203ENST00000507650 UBR3Q6ZT12 1888 aa22.13■■□□□ 1.13
HOXC4-203ENST00000507650 VIRMAQ69YN4 1812 aaKnown RBP22.13■■□□□ 1.13
HOXC4-203ENST00000507650 NKX1-1Q15270 411 aaPredicted RBP22.13■■□□□ 1.13
HOXC4-203ENST00000507650 C4BP0C0L5 1744 aa22.12■■□□□ 1.13
HOXC4-203ENST00000507650 MTFR1LQ9H019 292 aa22.12■■□□□ 1.13
HOXC4-203ENST00000507650 PPP1R1BQ9UD71 204 aaPredicted RBP22.12■■□□□ 1.13
HOXC4-203ENST00000507650 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
HOXC4-203ENST00000507650 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
HOXC4-203ENST00000507650 PALLDQ8WX93 1383 aa22.11■■□□□ 1.13
HOXC4-203ENST00000507650 UTRNP46939 3433 aa22.1■■□□□ 1.13
HOXC4-203ENST00000507650 MPRIPQ6WCQ1 1025 aa22.1■■□□□ 1.13
HOXC4-203ENST00000507650 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
HOXC4-203ENST00000507650 PHKG2P15735 406 aa22.08■■□□□ 1.13
HOXC4-203ENST00000507650 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
HOXC4-203ENST00000507650 PIGBQ92521 554 aa22.08■■□□□ 1.13
HOXC4-203ENST00000507650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.08■■□□□ 1.13
HOXC4-203ENST00000507650 KNSTRNQ9Y448 316 aa22.08■■□□□ 1.13
HOXC4-203ENST00000507650 SPG7Q9UQ90 795 aa22.07■■□□□ 1.12
HOXC4-203ENST00000507650 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
HOXC4-203ENST00000507650 AMIGO3Q86WK7 504 aa22.06■■□□□ 1.12
HOXC4-203ENST00000507650 PLEKHG2Q9H7P9 1386 aa22.06■■□□□ 1.12
HOXC4-203ENST00000507650 KDM6AO15550 1401 aaPredicted RBP22.06■■□□□ 1.12
HOXC4-203ENST00000507650 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
HOXC4-203ENST00000507650 COL5A3P25940 1745 aaPredicted RBP22.05■■□□□ 1.12
HOXC4-203ENST00000507650 IL13P35225 146 aa22.04■■□□□ 1.12
HOXC4-203ENST00000507650 TFCP2L1Q9NZI6 479 aa22.04■■□□□ 1.12
HOXC4-203ENST00000507650 ZNF831Q5JPB2 1677 aa22.04■■□□□ 1.12
HOXC4-203ENST00000507650 KDRP35968 1356 aa22.03■■□□□ 1.12
HOXC4-203ENST00000507650 COL23A1Q86Y22 540 aaPredicted RBP22.03■■□□□ 1.12
HOXC4-203ENST00000507650 IFNL2Q8IZJ0 200 aa22.02■■□□□ 1.12
HOXC4-203ENST00000507650 COL3A1P02461 1466 aaPredicted RBP22.02■■□□□ 1.12
HOXC4-203ENST00000507650 SYT17Q9BSW7 474 aa22.01■■□□□ 1.11
HOXC4-203ENST00000507650 ASAP1Q9ULH1 1129 aa22.01■■□□□ 1.11
HOXC4-203ENST00000507650 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
HOXC4-203ENST00000507650 SMIM5Q71RC9 77 aa22■■□□□ 1.11
HOXC4-203ENST00000507650 ARXQ96QS3 562 aa22■■□□□ 1.11
HOXC4-203ENST00000507650 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
HOXC4-203ENST00000507650 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
HOXC4-203ENST00000507650 MYH14Q7Z406 1995 aaKnown RBP21.99■■□□□ 1.11
HOXC4-203ENST00000507650 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
HOXC4-203ENST00000507650 MTHFSP49914 203 aa21.98■■□□□ 1.11
HOXC4-203ENST00000507650 CC2D1BQ5T0F9 858 aaKnown RBP21.98■■□□□ 1.11
HOXC4-203ENST00000507650 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
HOXC4-203ENST00000507650 TJP1Q07157 1748 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 ITPK1Q13572 414 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 SULT6B1Q6IMI4 303 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 TMOD3Q9NYL9 352 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 CHD4Q14839 1912 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 NPC1L1Q9UHC9 1359 aa21.97■■□□□ 1.11
HOXC4-203ENST00000507650 LOC102724428A0A0B4J2F2 783 aa21.96■■□□□ 1.11
HOXC4-203ENST00000507650 SIK1P57059 783 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms