RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-207ENST00000507594 EYA1Q99502 592 aa12.01□□□□□ -0.49
SMAD1-207ENST00000507594 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
SMAD1-207ENST00000507594 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
SMAD1-207ENST00000507594 BCL9LQ86UU0 1499 aa12.01□□□□□ -0.49
SMAD1-207ENST00000507594 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
SMAD1-207ENST00000507594 VPS72Q15906 364 aa12□□□□□ -0.49
SMAD1-207ENST00000507594 NBPF6Q5VWK0 638 aa12□□□□□ -0.49
SMAD1-207ENST00000507594 NBPF4Q96M43 638 aa12□□□□□ -0.49
SMAD1-207ENST00000507594 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
SMAD1-207ENST00000507594 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
SMAD1-207ENST00000507594 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
SMAD1-207ENST00000507594 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
SMAD1-207ENST00000507594 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
SMAD1-207ENST00000507594 PARP4Q9UKK3 1724 aaKnown RBP11.98□□□□□ -0.49
SMAD1-207ENST00000507594 ATRNO75882 1429 aa11.98□□□□□ -0.49
SMAD1-207ENST00000507594 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
SMAD1-207ENST00000507594 SPATA31A5Q5VU36 1347 aa11.98□□□□□ -0.49
SMAD1-207ENST00000507594 SPATA31A7Q8IWB4 1347 aa11.98□□□□□ -0.49
SMAD1-207ENST00000507594 IGSF1Q8N6C5 1336 aa11.98□□□□□ -0.49
SMAD1-207ENST00000507594 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
SMAD1-207ENST00000507594 CCDC146Q8IYE0 955 aa11.98□□□□□ -0.49
SMAD1-207ENST00000507594 WNK3Q9BYP7 1800 aa11.97□□□□□ -0.49
SMAD1-207ENST00000507594 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
SMAD1-207ENST00000507594 IL2RBP14784 551 aa11.97□□□□□ -0.49
SMAD1-207ENST00000507594 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
SMAD1-207ENST00000507594 GJD4Q96KN9 370 aaPredicted RBP11.97□□□□□ -0.49
SMAD1-207ENST00000507594 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
SMAD1-207ENST00000507594 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
SMAD1-207ENST00000507594 RXRBP28702 533 aa11.96□□□□□ -0.49
SMAD1-207ENST00000507594 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
SMAD1-207ENST00000507594 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
SMAD1-207ENST00000507594 THRAP3Q9Y2W1 955 aaKnown RBP11.96□□□□□ -0.49
SMAD1-207ENST00000507594 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
SMAD1-207ENST00000507594 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
SMAD1-207ENST00000507594 GLI3P10071 1580 aa11.95□□□□□ -0.5
SMAD1-207ENST00000507594 MEGF6O75095 1541 aa11.95□□□□□ -0.5
SMAD1-207ENST00000507594 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 ABCB7O75027 752 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 FCHSD2O94868 740 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 DDB1Q16531 1140 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
SMAD1-207ENST00000507594 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 PNISRQ8TF01 805 aaKnown RBP11.94□□□□□ -0.5
SMAD1-207ENST00000507594 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
SMAD1-207ENST00000507594 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
SMAD1-207ENST00000507594 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
SMAD1-207ENST00000507594 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
SMAD1-207ENST00000507594 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
SMAD1-207ENST00000507594 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
SMAD1-207ENST00000507594 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
SMAD1-207ENST00000507594 KDRP35968 1356 aa11.92□□□□□ -0.5
SMAD1-207ENST00000507594 EXOC5O00471 708 aa11.92□□□□□ -0.5
SMAD1-207ENST00000507594 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
SMAD1-207ENST00000507594 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
SMAD1-207ENST00000507594 GAS2L2Q8NHY3 880 aa11.92□□□□□ -0.5
SMAD1-207ENST00000507594 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
SMAD1-207ENST00000507594 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
SMAD1-207ENST00000507594 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
SMAD1-207ENST00000507594 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
SMAD1-207ENST00000507594 LRRC37A3O60309 1634 aa11.91□□□□□ -0.5
SMAD1-207ENST00000507594 AMOTQ4VCS5 1084 aa11.91□□□□□ -0.5
SMAD1-207ENST00000507594 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
SMAD1-207ENST00000507594 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
SMAD1-207ENST00000507594 YTHDC1Q96MU7 727 aaKnown RBP11.91□□□□□ -0.5
SMAD1-207ENST00000507594 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
SMAD1-207ENST00000507594 NCAPD2Q15021 1401 aa11.9□□□□□ -0.5
SMAD1-207ENST00000507594 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
SMAD1-207ENST00000507594 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
SMAD1-207ENST00000507594 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
SMAD1-207ENST00000507594 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
SMAD1-207ENST00000507594 RRP7AQ9Y3A4 280 aaKnown RBP11.9□□□□□ -0.5
SMAD1-207ENST00000507594 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.51
SMAD1-207ENST00000507594 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
SMAD1-207ENST00000507594 DISP2A7MBM2 1401 aa11.89□□□□□ -0.51
SMAD1-207ENST00000507594 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
SMAD1-207ENST00000507594 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
SMAD1-207ENST00000507594 APAF1O14727 1248 aa11.88□□□□□ -0.51
SMAD1-207ENST00000507594 RIPK4P57078 832 aa11.88□□□□□ -0.51
SMAD1-207ENST00000507594 NFE2L2Q16236 605 aa11.88□□□□□ -0.51
SMAD1-207ENST00000507594 MTHFSDQ2M296 383 aaKnown RBP11.88□□□□□ -0.51
SMAD1-207ENST00000507594 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
SMAD1-207ENST00000507594 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-207ENST00000507594 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
SMAD1-207ENST00000507594 RGS12O14924 1447 aa11.87□□□□□ -0.51
SMAD1-207ENST00000507594 HNRNPUQ00839 825 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMAD1-207ENST00000507594 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
SMAD1-207ENST00000507594 MAP3K5Q99683 1374 aa11.87□□□□□ -0.51
SMAD1-207ENST00000507594 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
SMAD1-207ENST00000507594 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
SMAD1-207ENST00000507594 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
SMAD1-207ENST00000507594 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
SMAD1-207ENST00000507594 SYTL4Q96C24 671 aaPredicted RBP11.86□□□□□ -0.51
SMAD1-207ENST00000507594 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
SMAD1-207ENST00000507594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD1-207ENST00000507594 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
SMAD1-207ENST00000507594 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
SMAD1-207ENST00000507594 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
SMAD1-207ENST00000507594 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms