RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 CC2D2BQ6DHV5 1058 aa11.09□□□□□ -0.63
LINC01088-203ENST00000507476 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
LINC01088-203ENST00000507476 CDC14CA4D256 554 aa11.08□□□□□ -0.64
LINC01088-203ENST00000507476 SCTRP47872 440 aa11.08□□□□□ -0.64
LINC01088-203ENST00000507476 CUEDC1Q9NWM3 386 aaPredicted RBP11.08□□□□□ -0.64
LINC01088-203ENST00000507476 A0A1W2PRU2 124 aa11.07□□□□□ -0.64
LINC01088-203ENST00000507476 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
LINC01088-203ENST00000507476 PRICKLE2Q7Z3G6 844 aa11.07□□□□□ -0.64
LINC01088-203ENST00000507476 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
LINC01088-203ENST00000507476 MEN1O00255 615 aa11.06□□□□□ -0.64
LINC01088-203ENST00000507476 RHOQP17081 205 aa11.06□□□□□ -0.64
LINC01088-203ENST00000507476 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
LINC01088-203ENST00000507476 PCDHB11Q9Y5F2 797 aa11.06□□□□□ -0.64
LINC01088-203ENST00000507476 APBB1O00213 710 aa11.04□□□□□ -0.64
LINC01088-203ENST00000507476 GPC1P35052 558 aa11.04□□□□□ -0.64
LINC01088-203ENST00000507476 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
LINC01088-203ENST00000507476 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
LINC01088-203ENST00000507476 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
LINC01088-203ENST00000507476 TRAK2O60296 914 aa11.03□□□□□ -0.64
LINC01088-203ENST00000507476 SLURP2P0DP57 97 aa11.01□□□□□ -0.65
LINC01088-203ENST00000507476 CLN3Q13286 438 aa11.01□□□□□ -0.65
LINC01088-203ENST00000507476 ZNF385CQ66K41 422 aaPredicted RBP11.01□□□□□ -0.65
LINC01088-203ENST00000507476 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
LINC01088-203ENST00000507476 WHAMMQ8TF30 809 aa11.01□□□□□ -0.65
LINC01088-203ENST00000507476 CEP126Q9P2H0 1117 aa11.01□□□□□ -0.65
LINC01088-203ENST00000507476 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
LINC01088-203ENST00000507476 GRIP2Q9C0E4 1043 aa11□□□□□ -0.65
LINC01088-203ENST00000507476 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
LINC01088-203ENST00000507476 POU4F2Q12837 409 aa10.99□□□□□ -0.65
LINC01088-203ENST00000507476 IRF5Q13568 498 aa10.99□□□□□ -0.65
LINC01088-203ENST00000507476 GAS6Q14393 721 aa10.99□□□□□ -0.65
LINC01088-203ENST00000507476 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
LINC01088-203ENST00000507476 CDCA7Q9BWT1 371 aaPredicted RBP10.99□□□□□ -0.65
LINC01088-203ENST00000507476 GSK3AP49840 483 aa10.98□□□□□ -0.65
LINC01088-203ENST00000507476 SLC27A3Q5K4L6 730 aa10.97□□□□□ -0.65
LINC01088-203ENST00000507476 ZNF837Q96EG3 531 aaPredicted RBP10.97□□□□□ -0.65
LINC01088-203ENST00000507476 RAB6BQ9NRW1 208 aa10.97□□□□□ -0.65
LINC01088-203ENST00000507476 ADAMTS8Q9UP79 889 aa10.97□□□□□ -0.65
LINC01088-203ENST00000507476 DBN1Q16643 649 aa10.96□□□□□ -0.65
LINC01088-203ENST00000507476 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.65
LINC01088-203ENST00000507476 DYRK1BQ9Y463 629 aa10.96□□□□□ -0.65
LINC01088-203ENST00000507476 SPATA31C2B4DYI2 1134 aa10.95□□□□□ -0.66
LINC01088-203ENST00000507476 KCNMA1Q12791 1236 aa10.95□□□□□ -0.66
LINC01088-203ENST00000507476 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
LINC01088-203ENST00000507476 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
LINC01088-203ENST00000507476 SVOPQ8N4V2 548 aa10.95□□□□□ -0.66
LINC01088-203ENST00000507476 NBPF15Q8N660 670 aa10.95□□□□□ -0.66
LINC01088-203ENST00000507476 ARHGEF15O94989 841 aa10.94□□□□□ -0.66
LINC01088-203ENST00000507476 ADAMTS2O95450 1211 aa10.94□□□□□ -0.66
LINC01088-203ENST00000507476 IL2RAP01589 272 aa10.94□□□□□ -0.66
LINC01088-203ENST00000507476 PHTF2Q8N3S3 785 aa10.94□□□□□ -0.66
LINC01088-203ENST00000507476 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
LINC01088-203ENST00000507476 GNRH1P01148 92 aa10.93□□□□□ -0.66
LINC01088-203ENST00000507476 RIPOR1Q6ZS17 1223 aa10.93□□□□□ -0.66
LINC01088-203ENST00000507476 GMCL1Q96IK5 515 aa10.93□□□□□ -0.66
LINC01088-203ENST00000507476 GPR25O00155 361 aa10.92□□□□□ -0.66
LINC01088-203ENST00000507476 SRSF11Q05519 484 aaKnown RBP10.92□□□□□ -0.66
LINC01088-203ENST00000507476 CNKSR1Q969H4 720 aa10.92□□□□□ -0.66
LINC01088-203ENST00000507476 GAS2L1Q99501 681 aaPredicted RBP10.92□□□□□ -0.66
LINC01088-203ENST00000507476 ESYT1Q9BSJ8 1104 aa10.92□□□□□ -0.66
LINC01088-203ENST00000507476 HRH3Q9Y5N1 445 aa10.92□□□□□ -0.66
LINC01088-203ENST00000507476 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.661e-7■■■■□ 19.4
LINC01088-203ENST00000507476 WDR44Q5JSH3 913 aa10.91□□□□□ -0.66
LINC01088-203ENST00000507476 LYPD4Q6UWN0 246 aa10.91□□□□□ -0.66
LINC01088-203ENST00000507476 PRM3Q9NNZ6 103 aa10.91□□□□□ -0.66
LINC01088-203ENST00000507476 WASLO00401 505 aaPredicted RBP10.9□□□□□ -0.66
LINC01088-203ENST00000507476 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.66
LINC01088-203ENST00000507476 CENPCQ03188 943 aa10.9□□□□□ -0.66
LINC01088-203ENST00000507476 VAC14Q08AM6 782 aa10.9□□□□□ -0.66
LINC01088-203ENST00000507476 TAS1R3Q7RTX0 852 aa10.9□□□□□ -0.66
LINC01088-203ENST00000507476 GDPD2Q9HCC8 539 aa10.9□□□□□ -0.66
LINC01088-203ENST00000507476 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
LINC01088-203ENST00000507476 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
LINC01088-203ENST00000507476 TIMMDC1Q9NPL8 285 aa10.89□□□□□ -0.67
LINC01088-203ENST00000507476 MBIPQ9NS73 344 aa10.88□□□□□ -0.67
LINC01088-203ENST00000507476 DOLKQ9UPQ8 538 aa10.88□□□□□ -0.67
LINC01088-203ENST00000507476 H7C1W4 665 aa10.87□□□□□ -0.67
LINC01088-203ENST00000507476 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
LINC01088-203ENST00000507476 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
LINC01088-203ENST00000507476 SLFNL1Q499Z3 407 aa10.87□□□□□ -0.67
LINC01088-203ENST00000507476 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
LINC01088-203ENST00000507476 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
LINC01088-203ENST00000507476 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
LINC01088-203ENST00000507476 ABL2P42684 1182 aa10.86□□□□□ -0.67
LINC01088-203ENST00000507476 RASSF7Q02833 373 aa10.86□□□□□ -0.67
LINC01088-203ENST00000507476 FOXR1Q6PIV2 292 aa10.86□□□□□ -0.67
LINC01088-203ENST00000507476 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
LINC01088-203ENST00000507476 F11P03951 625 aa10.85□□□□□ -0.67
LINC01088-203ENST00000507476 THBS1P07996 1170 aa10.85□□□□□ -0.67
LINC01088-203ENST00000507476 MCM6Q14566 821 aa10.85□□□□□ -0.67
LINC01088-203ENST00000507476 ZSCAN10Q96SZ4 725 aaPredicted RBP10.85□□□□□ -0.67
LINC01088-203ENST00000507476 PHKA2P46019 1235 aa10.84□□□□□ -0.67
LINC01088-203ENST00000507476 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
LINC01088-203ENST00000507476 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
LINC01088-203ENST00000507476 ETNK1Q9HBU6 452 aa10.84□□□□□ -0.67
LINC01088-203ENST00000507476 IGF1RP08069 1367 aa10.84□□□□□ -0.67
LINC01088-203ENST00000507476 RNF225M0QZC1 329 aaPredicted RBP10.83□□□□□ -0.68
LINC01088-203ENST00000507476 USP4Q13107 963 aa10.83□□□□□ -0.68
LINC01088-203ENST00000507476 OXLD1Q5BKU9 147 aa10.83□□□□□ -0.68
LINC01088-203ENST00000507476 TMEM151AQ8N4L1 468 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms