RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 RNF217Q8TC41 542 aa10.68□□□□□ -0.7
SMN2-207ENST00000507458 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
SMN2-207ENST00000507458 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
SMN2-207ENST00000507458 NR1H3Q13133 447 aa10.67□□□□□ -0.7
SMN2-207ENST00000507458 MCM6Q14566 821 aa10.67□□□□□ -0.7
SMN2-207ENST00000507458 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
SMN2-207ENST00000507458 SLC35F4A4IF30 521 aa10.66□□□□□ -0.7
SMN2-207ENST00000507458 RNF20Q5VTR2 975 aa10.66□□□□□ -0.7
SMN2-207ENST00000507458 MTMR14Q8NCE2 650 aa10.65□□□□□ -0.7
SMN2-207ENST00000507458 NANOS1Q8WY41 292 aaKnown RBP10.65□□□□□ -0.7
SMN2-207ENST00000507458 KDF1Q8NAX2 398 aaPredicted RBP10.64□□□□□ -0.71
SMN2-207ENST00000507458 ITGA6P23229 1130 aa10.63□□□□□ -0.71
SMN2-207ENST00000507458 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
SMN2-207ENST00000507458 ATP5J2-PTCD1G3V325 749 aa10.62□□□□□ -0.71
SMN2-207ENST00000507458 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
SMN2-207ENST00000507458 GPR161Q8N6U8 529 aaKnown RBP10.62□□□□□ -0.71
SMN2-207ENST00000507458 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
SMN2-207ENST00000507458 CDC14CA4D256 554 aa10.61□□□□□ -0.71
SMN2-207ENST00000507458 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
SMN2-207ENST00000507458 CNTNAP3BQ96NU0 1288 aa10.61□□□□□ -0.71
SMN2-207ENST00000507458 CNTNAP3Q9BZ76 1288 aa10.61□□□□□ -0.71
SMN2-207ENST00000507458 SNRKQ9NRH2 765 aa10.61□□□□□ -0.71
SMN2-207ENST00000507458 RAD21O60216 631 aa10.6□□□□□ -0.71
SMN2-207ENST00000507458 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
SMN2-207ENST00000507458 ERVK-9P63128 1117 aa10.6□□□□□ -0.71
SMN2-207ENST00000507458 SV2AQ7L0J3 742 aa10.6□□□□□ -0.71
SMN2-207ENST00000507458 VWA5B2Q8N398 1253 aa10.6□□□□□ -0.71
SMN2-207ENST00000507458 COL25A1Q9BXS0 654 aaPredicted RBP10.6□□□□□ -0.71
SMN2-207ENST00000507458 GPR37L1O60883 481 aa10.59□□□□□ -0.71
SMN2-207ENST00000507458 RNF144AP50876 292 aaPredicted RBP10.59□□□□□ -0.71
SMN2-207ENST00000507458 KRT76Q01546 638 aa10.59□□□□□ -0.71
SMN2-207ENST00000507458 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
SMN2-207ENST00000507458 ESF1Q9H501 851 aaKnown RBP10.59□□□□□ -0.71
SMN2-207ENST00000507458 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
SMN2-207ENST00000507458 MEN1O00255 615 aa10.58□□□□□ -0.72
SMN2-207ENST00000507458 PCDHB11Q9Y5F2 797 aa10.58□□□□□ -0.72
SMN2-207ENST00000507458 PRICKLE2Q7Z3G6 844 aa10.57□□□□□ -0.72
SMN2-207ENST00000507458 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
SMN2-207ENST00000507458 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
SMN2-207ENST00000507458 A0A1W2PRU2 124 aa10.56□□□□□ -0.72
SMN2-207ENST00000507458 GPC1P35052 558 aa10.56□□□□□ -0.72
SMN2-207ENST00000507458 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
SMN2-207ENST00000507458 CUX2O14529 1486 aa10.55□□□□□ -0.72
SMN2-207ENST00000507458 RHOQP17081 205 aa10.54□□□□□ -0.72
SMN2-207ENST00000507458 SCTRP47872 440 aa10.54□□□□□ -0.72
SMN2-207ENST00000507458 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
SMN2-207ENST00000507458 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
SMN2-207ENST00000507458 SLC27A3Q5K4L6 730 aa10.53□□□□□ -0.72
SMN2-207ENST00000507458 SMARCA4P51532 1647 aa10.52□□□□□ -0.73
SMN2-207ENST00000507458 CLN3Q13286 438 aa10.52□□□□□ -0.73
SMN2-207ENST00000507458 C14orf37Q86TY3 774 aa10.52□□□□□ -0.73
SMN2-207ENST00000507458 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
SMN2-207ENST00000507458 SMARCA2P51531 1590 aa10.52□□□□□ -0.73
SMN2-207ENST00000507458 A6NJR5 290 aa10.51□□□□□ -0.73
SMN2-207ENST00000507458 OSBPL3Q9H4L5 887 aa10.51□□□□□ -0.73
SMN2-207ENST00000507458 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
SMN2-207ENST00000507458 HMGXB3Q12766 1538 aa10.5□□□□□ -0.73
SMN2-207ENST00000507458 TRAK2O60296 914 aa10.5□□□□□ -0.73
SMN2-207ENST00000507458 MYCP01106 439 aaPredicted RBP10.5□□□□□ -0.73
SMN2-207ENST00000507458 EIF4G2P78344 907 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMN2-207ENST00000507458 CEP126Q9P2H0 1117 aa10.5□□□□□ -0.73
SMN2-207ENST00000507458 COG6Q9Y2V7 657 aa10.5□□□□□ -0.73
SMN2-207ENST00000507458 WASHC4Q2M389 1173 aa10.49□□□□□ -0.73
SMN2-207ENST00000507458 GMCL1Q96IK5 515 aa10.49□□□□□ -0.73
SMN2-207ENST00000507458 RIPOR1Q6ZS17 1223 aa10.48□□□□□ -0.73
SMN2-207ENST00000507458 SVOPQ8N4V2 548 aa10.48□□□□□ -0.73
SMN2-207ENST00000507458 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
SMN2-207ENST00000507458 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
SMN2-207ENST00000507458 DYRK1BQ9Y463 629 aa10.48□□□□□ -0.73
SMN2-207ENST00000507458 NESP48681 1621 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 GNRH1P01148 92 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 SLURP2P0DP57 97 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 POU4F2Q12837 409 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 FOXR1Q6PIV2 292 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 GRIP2Q9C0E4 1043 aa10.47□□□□□ -0.73
SMN2-207ENST00000507458 ZNF385CQ66K41 422 aaPredicted RBP10.46□□□□□ -0.73
SMN2-207ENST00000507458 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
SMN2-207ENST00000507458 NBPF15Q8N660 670 aa10.46□□□□□ -0.73
SMN2-207ENST00000507458 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.73
SMN2-207ENST00000507458 CCDC85AQ96PX6 553 aaPredicted RBP10.46□□□□□ -0.73
SMN2-207ENST00000507458 ZMYND15Q9H091 742 aa10.46□□□□□ -0.73
SMN2-207ENST00000507458 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
SMN2-207ENST00000507458 H7C1W4 665 aa10.45□□□□□ -0.74
SMN2-207ENST00000507458 ABL2P42684 1182 aa10.45□□□□□ -0.74
SMN2-207ENST00000507458 WDR44Q5JSH3 913 aa10.45□□□□□ -0.74
SMN2-207ENST00000507458 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
SMN2-207ENST00000507458 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
SMN2-207ENST00000507458 RAB6BQ9NRW1 208 aa10.45□□□□□ -0.74
SMN2-207ENST00000507458 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
SMN2-207ENST00000507458 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
SMN2-207ENST00000507458 SPATA31C2B4DYI2 1134 aa10.44□□□□□ -0.74
SMN2-207ENST00000507458 RNF225M0QZC1 329 aaPredicted RBP10.44□□□□□ -0.74
SMN2-207ENST00000507458 SLFNL1Q499Z3 407 aa10.44□□□□□ -0.74
SMN2-207ENST00000507458 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
SMN2-207ENST00000507458 CNKSR1Q969H4 720 aa10.44□□□□□ -0.74
SMN2-207ENST00000507458 ESYT1Q9BSJ8 1104 aa10.44□□□□□ -0.74
SMN2-207ENST00000507458 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
SMN2-207ENST00000507458 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
SMN2-207ENST00000507458 SRSF11Q05519 484 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms