RNA–Protein interactions for RNA: ENST00000507277.1

UBE2B-206, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 5

Gene UBE2B, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-206ENST00000507277 TRAK1Q9UPV9 953 aa13.19□□□□□ -0.3
UBE2B-206ENST00000507277 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
UBE2B-206ENST00000507277 AKAP12Q02952 1782 aa13.19□□□□□ -0.3
UBE2B-206ENST00000507277 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
UBE2B-206ENST00000507277 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
UBE2B-206ENST00000507277 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
UBE2B-206ENST00000507277 ACEP12821 1306 aa13.17□□□□□ -0.3
UBE2B-206ENST00000507277 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
UBE2B-206ENST00000507277 USP6P35125 1406 aa13.17□□□□□ -0.3
UBE2B-206ENST00000507277 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
UBE2B-206ENST00000507277 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
UBE2B-206ENST00000507277 KCNQ4P56696 695 aa13.16□□□□□ -0.3
UBE2B-206ENST00000507277 SLC27A3Q5K4L6 730 aa13.16□□□□□ -0.3
UBE2B-206ENST00000507277 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
UBE2B-206ENST00000507277 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
UBE2B-206ENST00000507277 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
UBE2B-206ENST00000507277 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
UBE2B-206ENST00000507277 ARHGEF28Q8N1W1 1705 aaKnown RBP13.15□□□□□ -0.3
UBE2B-206ENST00000507277 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
UBE2B-206ENST00000507277 FSTL1Q12841 308 aa13.14□□□□□ -0.31
UBE2B-206ENST00000507277 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
UBE2B-206ENST00000507277 CARD10Q9BWT7 1032 aa13.14□□□□□ -0.31
UBE2B-206ENST00000507277 NHSQ6T4R5 1651 aa13.14□□□□□ -0.31
UBE2B-206ENST00000507277 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
UBE2B-206ENST00000507277 COL23A1Q86Y22 540 aaPredicted RBP13.13□□□□□ -0.31
UBE2B-206ENST00000507277 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
UBE2B-206ENST00000507277 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
UBE2B-206ENST00000507277 WNK3Q9BYP7 1800 aa13.11□□□□□ -0.31
UBE2B-206ENST00000507277 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
UBE2B-206ENST00000507277 BTAF1O14981 1849 aa13.1□□□□□ -0.31
UBE2B-206ENST00000507277 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
UBE2B-206ENST00000507277 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
UBE2B-206ENST00000507277 NLRP6P59044 892 aa13.09□□□□□ -0.31
UBE2B-206ENST00000507277 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
UBE2B-206ENST00000507277 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
UBE2B-206ENST00000507277 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
UBE2B-206ENST00000507277 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
UBE2B-206ENST00000507277 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
UBE2B-206ENST00000507277 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
UBE2B-206ENST00000507277 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
UBE2B-206ENST00000507277 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
UBE2B-206ENST00000507277 COL18A1P39060 1754 aa13.04□□□□□ -0.32
UBE2B-206ENST00000507277 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
UBE2B-206ENST00000507277 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
UBE2B-206ENST00000507277 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
UBE2B-206ENST00000507277 ARHGAP27Q6ZUM4 889 aa13.03□□□□□ -0.32
UBE2B-206ENST00000507277 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
UBE2B-206ENST00000507277 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
UBE2B-206ENST00000507277 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.32
UBE2B-206ENST00000507277 IL2RBP14784 551 aa13.02□□□□□ -0.33
UBE2B-206ENST00000507277 NUBP1P53384 320 aa13.02□□□□□ -0.33
UBE2B-206ENST00000507277 MLLT1Q03111 559 aaPredicted RBP13.02□□□□□ -0.33
UBE2B-206ENST00000507277 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
UBE2B-206ENST00000507277 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
UBE2B-206ENST00000507277 RRAGCQ9HB90 399 aa13.02□□□□□ -0.33
UBE2B-206ENST00000507277 CPSF1Q10570 1443 aaKnown RBP13.02□□□□□ -0.33
UBE2B-206ENST00000507277 ABCC6O95255 1503 aa13.02□□□□□ -0.33
UBE2B-206ENST00000507277 SOX12O15370 315 aa13.01□□□□□ -0.33
UBE2B-206ENST00000507277 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
UBE2B-206ENST00000507277 SLIT3O75094 1523 aa13.01□□□□□ -0.33
UBE2B-206ENST00000507277 CICQ96RK0 1608 aaPredicted RBP13□□□□□ -0.33
UBE2B-206ENST00000507277 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
UBE2B-206ENST00000507277 FOXN1O15353 648 aa13□□□□□ -0.33
UBE2B-206ENST00000507277 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
UBE2B-206ENST00000507277 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
UBE2B-206ENST00000507277 DDX54Q8TDD1 881 aaKnown RBP13□□□□□ -0.33
UBE2B-206ENST00000507277 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
UBE2B-206ENST00000507277 BCS1LQ9Y276 419 aa13□□□□□ -0.33
UBE2B-206ENST00000507277 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
UBE2B-206ENST00000507277 ABHD8Q96I13 439 aa12.98□□□□□ -0.33
UBE2B-206ENST00000507277 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
UBE2B-206ENST00000507277 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
UBE2B-206ENST00000507277 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
UBE2B-206ENST00000507277 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
UBE2B-206ENST00000507277 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
UBE2B-206ENST00000507277 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
UBE2B-206ENST00000507277 MPHOSPH9Q99550 1183 aa12.95□□□□□ -0.34
UBE2B-206ENST00000507277 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
UBE2B-206ENST00000507277 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
UBE2B-206ENST00000507277 RGS19P49795 217 aa12.94□□□□□ -0.34
UBE2B-206ENST00000507277 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
UBE2B-206ENST00000507277 MKRN1Q9UHC7 482 aaKnown RBP12.94□□□□□ -0.34
UBE2B-206ENST00000507277 ANKRD36BQ8N2N9 1353 aa12.94□□□□□ -0.34
UBE2B-206ENST00000507277 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 GABBR2O75899 941 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 FCHSD2O94868 740 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 LY75O60449 1722 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 NSD2O96028 1365 aa12.93□□□□□ -0.34
UBE2B-206ENST00000507277 ERBB3P21860 1342 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 CCDC85CA6NKD9 419 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 USP47Q96K76 1375 aa12.92□□□□□ -0.34
UBE2B-206ENST00000507277 PHF14O94880 888 aa12.91□□□□□ -0.34
UBE2B-206ENST00000507277 LBX1P52954 281 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms