RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 QTRT2Q9H974 415 aaKnown RBP18.79■□□□□ 0.6
RNF4-208ENST00000507247 OVOS2A0A0G2JMS6 1433 aa18.79■□□□□ 0.6
RNF4-208ENST00000507247 MAPK8IP3Q9UPT6 1336 aa18.78■□□□□ 0.6
RNF4-208ENST00000507247 APAF1O14727 1248 aa18.78■□□□□ 0.6
RNF4-208ENST00000507247 IL2RBP14784 551 aa18.78■□□□□ 0.6
RNF4-208ENST00000507247 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
RNF4-208ENST00000507247 RAPGEF4Q8WZA2 1011 aa18.78■□□□□ 0.6
RNF4-208ENST00000507247 TRPC5Q9UL62 973 aaPredicted RBP18.78■□□□□ 0.6
RNF4-208ENST00000507247 THRAP3Q9Y2W1 955 aaKnown RBP18.77■□□□□ 0.6
RNF4-208ENST00000507247 LRRC37A3O60309 1634 aa18.77■□□□□ 0.6
RNF4-208ENST00000507247 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.59
RNF4-208ENST00000507247 THSD7AQ9UPZ6 1657 aa18.76■□□□□ 0.59
RNF4-208ENST00000507247 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
RNF4-208ENST00000507247 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
RNF4-208ENST00000507247 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
RNF4-208ENST00000507247 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
RNF4-208ENST00000507247 NEFMP07197 916 aa18.75■□□□□ 0.59
RNF4-208ENST00000507247 TMPOP42166 694 aaKnown RBP18.75■□□□□ 0.59
RNF4-208ENST00000507247 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
RNF4-208ENST00000507247 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
RNF4-208ENST00000507247 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
RNF4-208ENST00000507247 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
RNF4-208ENST00000507247 RGS12O14924 1447 aa18.74■□□□□ 0.59
RNF4-208ENST00000507247 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
RNF4-208ENST00000507247 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
RNF4-208ENST00000507247 UPF1Q92900 1129 aaKnown RBP eCLIP18.73■□□□□ 0.59
RNF4-208ENST00000507247 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
RNF4-208ENST00000507247 AMOTQ4VCS5 1084 aa18.72■□□□□ 0.59
RNF4-208ENST00000507247 GAS2L2Q8NHY3 880 aa18.72■□□□□ 0.59
RNF4-208ENST00000507247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.72■□□□□ 0.595e-8■□□□□ 9.7
RNF4-208ENST00000507247 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
RNF4-208ENST00000507247 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
RNF4-208ENST00000507247 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
RNF4-208ENST00000507247 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
RNF4-208ENST00000507247 TNS2Q63HR2 1409 aa18.71■□□□□ 0.59
RNF4-208ENST00000507247 RIPK4P57078 832 aa18.7■□□□□ 0.58
RNF4-208ENST00000507247 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
RNF4-208ENST00000507247 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
RNF4-208ENST00000507247 SCN11AQ9UI33 1791 aa18.69■□□□□ 0.58
RNF4-208ENST00000507247 CYP27B1O15528 508 aa18.69■□□□□ 0.58
RNF4-208ENST00000507247 TRIM35Q9UPQ4 493 aa18.69■□□□□ 0.58
RNF4-208ENST00000507247 ADAMTS7Q9UKP4 1686 aa18.69■□□□□ 0.58
RNF4-208ENST00000507247 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
RNF4-208ENST00000507247 BRWD3Q6RI45 1802 aa18.68■□□□□ 0.58
RNF4-208ENST00000507247 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
RNF4-208ENST00000507247 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
RNF4-208ENST00000507247 EXOC5O00471 708 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 ONECUT3O60422 494 aaPredicted RBP18.66■□□□□ 0.58
RNF4-208ENST00000507247 PHKG2P15735 406 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 DDB1Q16531 1140 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 CCDC27Q2M243 656 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
RNF4-208ENST00000507247 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 ZNF521Q96K83 1311 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
RNF4-208ENST00000507247 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
RNF4-208ENST00000507247 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
RNF4-208ENST00000507247 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
RNF4-208ENST00000507247 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
RNF4-208ENST00000507247 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
RNF4-208ENST00000507247 NGEFQ8N5V2 710 aa18.65■□□□□ 0.58
RNF4-208ENST00000507247 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
RNF4-208ENST00000507247 A0A0G2JS52 829 aa18.64■□□□□ 0.57
RNF4-208ENST00000507247 MYT1Q01538 1121 aa18.64■□□□□ 0.57
RNF4-208ENST00000507247 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
RNF4-208ENST00000507247 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
RNF4-208ENST00000507247 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
RNF4-208ENST00000507247 MCM10Q7L590 875 aa18.63■□□□□ 0.57
RNF4-208ENST00000507247 SEPT12Q8IYM1 358 aa18.63■□□□□ 0.57
RNF4-208ENST00000507247 SIPA1L3O60292 1781 aaPredicted RBP18.63■□□□□ 0.57
RNF4-208ENST00000507247 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
RNF4-208ENST00000507247 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
RNF4-208ENST00000507247 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
RNF4-208ENST00000507247 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
RNF4-208ENST00000507247 DOT1LQ8TEK3 1739 aa18.62■□□□□ 0.57
RNF4-208ENST00000507247 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
RNF4-208ENST00000507247 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
RNF4-208ENST00000507247 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
RNF4-208ENST00000507247 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
RNF4-208ENST00000507247 ITGB4P16144 1822 aa18.6■□□□□ 0.57
RNF4-208ENST00000507247 RNMTO43148 476 aaKnown RBP18.6■□□□□ 0.57
RNF4-208ENST00000507247 MRC1P22897 1456 aa18.59■□□□□ 0.57
RNF4-208ENST00000507247 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
RNF4-208ENST00000507247 WDR63Q8IWG1 891 aa18.58■□□□□ 0.56
RNF4-208ENST00000507247 DCAF5Q96JK2 942 aa18.58■□□□□ 0.56
RNF4-208ENST00000507247 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
RNF4-208ENST00000507247 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
RNF4-208ENST00000507247 SBF2Q86WG5 1849 aa18.56■□□□□ 0.56
RNF4-208ENST00000507247 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
RNF4-208ENST00000507247 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
RNF4-208ENST00000507247 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
RNF4-208ENST00000507247 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
RNF4-208ENST00000507247 FAM182BQ5T319 152 aa18.54■□□□□ 0.56
RNF4-208ENST00000507247 IL16Q14005 1332 aa18.53■□□□□ 0.56
RNF4-208ENST00000507247 KRT27Q7Z3Y8 459 aa18.53■□□□□ 0.56
RNF4-208ENST00000507247 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms