RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 MCM10Q7L590 875 aa16.33■□□□□ 0.2
SIL1-209ENST00000507002 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.2
SIL1-209ENST00000507002 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
SIL1-209ENST00000507002 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
SIL1-209ENST00000507002 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
SIL1-209ENST00000507002 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
SIL1-209ENST00000507002 CRB1P82279 1406 aa16.32■□□□□ 0.2
SIL1-209ENST00000507002 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
SIL1-209ENST00000507002 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
SIL1-209ENST00000507002 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
SIL1-209ENST00000507002 BCAR3O75815 825 aa16.31■□□□□ 0.2
SIL1-209ENST00000507002 FBXO41Q8TF61 875 aa16.31■□□□□ 0.2
SIL1-209ENST00000507002 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
SIL1-209ENST00000507002 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
SIL1-209ENST00000507002 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
SIL1-209ENST00000507002 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
SIL1-209ENST00000507002 AMOTQ4VCS5 1084 aa16.29■□□□□ 0.2
SIL1-209ENST00000507002 COL14A1Q05707 1796 aaKnown RBP16.28■□□□□ 0.2
SIL1-209ENST00000507002 UBAP1LF5GYI3 381 aa16.28■□□□□ 0.2
SIL1-209ENST00000507002 CHL1O00533 1208 aa16.28■□□□□ 0.2
SIL1-209ENST00000507002 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
SIL1-209ENST00000507002 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
SIL1-209ENST00000507002 WDR17Q8IZU2 1322 aa16.27■□□□□ 0.2
SIL1-209ENST00000507002 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
SIL1-209ENST00000507002 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.19
SIL1-209ENST00000507002 MEGF6O75095 1541 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 PARP4Q9UKK3 1724 aaKnown RBP16.26■□□□□ 0.19
SIL1-209ENST00000507002 AKAP4Q5JQC9 854 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 C20orf194Q5TEA3 1177 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 CRBNQ96SW2 442 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
SIL1-209ENST00000507002 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
SIL1-209ENST00000507002 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
SIL1-209ENST00000507002 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
SIL1-209ENST00000507002 C1orf141Q5JVX7 400 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 SSH1Q8WYL5 1049 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
SIL1-209ENST00000507002 OVOS2A0A0G2JMS6 1433 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 VAMP4O75379 141 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 ALDH1L2Q3SY69 923 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
SIL1-209ENST00000507002 PDE3AQ14432 1141 aa16.22■□□□□ 0.19
SIL1-209ENST00000507002 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
SIL1-209ENST00000507002 FRAT1Q92837 279 aaPredicted RBP16.22■□□□□ 0.19
SIL1-209ENST00000507002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
SIL1-209ENST00000507002 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
SIL1-209ENST00000507002 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
SIL1-209ENST00000507002 PLCH1Q4KWH8 1693 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 EVA1CP58658 441 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
SIL1-209ENST00000507002 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 CERKQ8TCT0 537 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 CARD10Q9BWT7 1032 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 STRN4Q9NRL3 753 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 SPG7Q9UQ90 795 aa16.21■□□□□ 0.19
SIL1-209ENST00000507002 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
SIL1-209ENST00000507002 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
SIL1-209ENST00000507002 LARP1Q6PKG0 1096 aaKnown RBP16.2■□□□□ 0.18
SIL1-209ENST00000507002 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
SIL1-209ENST00000507002 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
SIL1-209ENST00000507002 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
SIL1-209ENST00000507002 MPRIPQ6WCQ1 1025 aa16.19■□□□□ 0.18
SIL1-209ENST00000507002 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
SIL1-209ENST00000507002 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
SIL1-209ENST00000507002 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
SIL1-209ENST00000507002 CCDC136Q96JN2 1154 aa16.18■□□□□ 0.18
SIL1-209ENST00000507002 BTG4Q9NY30 223 aa16.18■□□□□ 0.18
SIL1-209ENST00000507002 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
SIL1-209ENST00000507002 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
SIL1-209ENST00000507002 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
SIL1-209ENST00000507002 PHKG2P15735 406 aa16.17■□□□□ 0.18
SIL1-209ENST00000507002 TEFQ10587 303 aa16.17■□□□□ 0.18
SIL1-209ENST00000507002 MRPL50Q8N5N7 158 aaKnown RBP16.17■□□□□ 0.18
SIL1-209ENST00000507002 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
SIL1-209ENST00000507002 MS4A1P11836 297 aa16.16■□□□□ 0.18
SIL1-209ENST00000507002 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
SIL1-209ENST00000507002 NOB1Q9ULX3 412 aaKnown RBP16.16■□□□□ 0.18
SIL1-209ENST00000507002 WNK3Q9BYP7 1800 aa16.16■□□□□ 0.18
SIL1-209ENST00000507002 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
SIL1-209ENST00000507002 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
SIL1-209ENST00000507002 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
SIL1-209ENST00000507002 ADAMTS2O95450 1211 aa16.15■□□□□ 0.18
SIL1-209ENST00000507002 RLBP1P12271 317 aa16.15■□□□□ 0.18
SIL1-209ENST00000507002 IL2RBP14784 551 aa16.15■□□□□ 0.18
SIL1-209ENST00000507002 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
SIL1-209ENST00000507002 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
SIL1-209ENST00000507002 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
SIL1-209ENST00000507002 CYP27B1O15528 508 aa16.14■□□□□ 0.17
SIL1-209ENST00000507002 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms