RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 MOXD2PA6NHM9 499 aa7.17□□□□□ -1.26
TOPBP1-205ENST00000506779 HYAL3O43820 417 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-205ENST00000506779 PRSS36Q5K4E3 855 aa7.17□□□□□ -1.26
TOPBP1-205ENST00000506779 SPIRE2Q8WWL2 714 aa7.17□□□□□ -1.26
TOPBP1-205ENST00000506779 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-205ENST00000506779 FZD5Q13467 585 aa7.16□□□□□ -1.26
TOPBP1-205ENST00000506779 ARMC2Q8NEN0 867 aa7.16□□□□□ -1.26
TOPBP1-205ENST00000506779 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
TOPBP1-205ENST00000506779 CFAP99D6REC4 459 aa7.15□□□□□ -1.26
TOPBP1-205ENST00000506779 PAX4O43316 350 aa7.15□□□□□ -1.26
TOPBP1-205ENST00000506779 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
TOPBP1-205ENST00000506779 DYRK1BQ9Y463 629 aa7.15□□□□□ -1.26
TOPBP1-205ENST00000506779 PTGIRP43119 386 aa7.14□□□□□ -1.27
TOPBP1-205ENST00000506779 MAP2K5Q13163 448 aa7.14□□□□□ -1.27
TOPBP1-205ENST00000506779 ERFEQ4G0M1 354 aa7.14□□□□□ -1.27
TOPBP1-205ENST00000506779 KCTD15Q96SI1 283 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-205ENST00000506779 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
TOPBP1-205ENST00000506779 ADH1AP07327 375 aa7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 CLCN1P35523 988 aa7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 NBPF14Q5TI25 921 aa7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 GOLGA6L1Q8N7Z2 621 aa7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 KDF1Q8NAX2 398 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 GAS2L1Q99501 681 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
TOPBP1-205ENST00000506779 IRF6O14896 467 aa7.12□□□□□ -1.27
TOPBP1-205ENST00000506779 RNF144AP50876 292 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-205ENST00000506779 LAMC2Q13753 1193 aa7.12□□□□□ -1.27
TOPBP1-205ENST00000506779 GPIHBP1Q8IV16 184 aa7.12□□□□□ -1.27
TOPBP1-205ENST00000506779 BTBD6Q96KE9 485 aa7.12□□□□□ -1.27
TOPBP1-205ENST00000506779 FMNL2Q96PY5 1086 aa7.12□□□□□ -1.27
TOPBP1-205ENST00000506779 DGKGP49619 791 aa7.11□□□□□ -1.27
TOPBP1-205ENST00000506779 CFHR5Q9BXR6 569 aa7.11□□□□□ -1.27
TOPBP1-205ENST00000506779 PER1O15534 1290 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-205ENST00000506779 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-205ENST00000506779 ADD1P35611 737 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-205ENST00000506779 NUCKS1Q9H1E3 243 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-205ENST00000506779 COL17A1Q9UMD9 1497 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-205ENST00000506779 TULP1O00294 542 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-205ENST00000506779 SLCO4C1Q6ZQN7 724 aa7.08□□□□□ -1.28
TOPBP1-205ENST00000506779 RIC3Q7Z5B4 369 aa7.07□□□□□ -1.28
TOPBP1-205ENST00000506779 KRTAP4-11Q9BYQ6 195 aa7.07□□□□□ -1.28
TOPBP1-205ENST00000506779 TMPRSS4Q9NRS4 437 aa7.07□□□□□ -1.28
TOPBP1-205ENST00000506779 CDV3Q9UKY7 258 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-205ENST00000506779 ZNF784Q8NCA9 323 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-205ENST00000506779 GGA1Q9UJY5 639 aa7.06□□□□□ -1.28
TOPBP1-205ENST00000506779 LILRA1O75019 489 aa7.05□□□□□ -1.28
TOPBP1-205ENST00000506779 SPATA31C1P0DKV0 1188 aa7.05□□□□□ -1.28
TOPBP1-205ENST00000506779 EPXP11678 715 aa7.05□□□□□ -1.28
TOPBP1-205ENST00000506779 POU4F2Q12837 409 aa7.05□□□□□ -1.28
TOPBP1-205ENST00000506779 SLC10A4Q96EP9 437 aa7.05□□□□□ -1.28
TOPBP1-205ENST00000506779 KDM2AQ9Y2K7 1162 aa7.05□□□□□ -1.28
TOPBP1-205ENST00000506779 PCDHB15Q9Y5E8 787 aa7.04□□□□□ -1.28
TOPBP1-205ENST00000506779 THBS1P07996 1170 aa7.03□□□□□ -1.28
TOPBP1-205ENST00000506779 HRCP23327 699 aa7.03□□□□□ -1.28
TOPBP1-205ENST00000506779 GJA5P36382 358 aa7.03□□□□□ -1.28
TOPBP1-205ENST00000506779 PHF24Q9UPV7 400 aa7.03□□□□□ -1.28
TOPBP1-205ENST00000506779 C2CD2LO14523 706 aa7.02□□□□□ -1.29
TOPBP1-205ENST00000506779 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-205ENST00000506779 GPKOWQ92917 476 aaPredicted RBP eCLIP7.02□□□□□ -1.29
TOPBP1-205ENST00000506779 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
TOPBP1-205ENST00000506779 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
TOPBP1-205ENST00000506779 MINK1Q8N4C8 1332 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-205ENST00000506779 F11P03951 625 aa7.01□□□□□ -1.29
TOPBP1-205ENST00000506779 SSTR3P32745 418 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-205ENST00000506779 GPC1P35052 558 aa7.01□□□□□ -1.29
TOPBP1-205ENST00000506779 PLVAPQ9BX97 442 aa7.01□□□□□ -1.29
TOPBP1-205ENST00000506779 BMP4P12644 408 aa7□□□□□ -1.29
TOPBP1-205ENST00000506779 VSIG10Q8N0Z9 540 aa7□□□□□ -1.29
TOPBP1-205ENST00000506779 CCDC102AQ96A19 550 aa7□□□□□ -1.29
TOPBP1-205ENST00000506779 ZBTB3Q9H5J0 574 aa7□□□□□ -1.29
TOPBP1-205ENST00000506779 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-205ENST00000506779 RSBN1LQ6PCB5 846 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-205ENST00000506779 RNF135Q8IUD6 432 aa6.99□□□□□ -1.29
TOPBP1-205ENST00000506779 NBPF15Q8N660 670 aa6.99□□□□□ -1.29
TOPBP1-205ENST00000506779 ARHGAP9Q9BRR9 750 aa6.99□□□□□ -1.29
TOPBP1-205ENST00000506779 CHSY3Q70JA7 882 aa6.98□□□□□ -1.29
TOPBP1-205ENST00000506779 H2AFB1P0C5Y9 115 aa6.97□□□□□ -1.29
TOPBP1-205ENST00000506779 H2AFB2P0C5Z0 115 aa6.97□□□□□ -1.29
TOPBP1-205ENST00000506779 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
TOPBP1-205ENST00000506779 ERVH48-1M5A8F1 160 aa6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 MEN1O00255 615 aa6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 ELNP15502 786 aa6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 UBAP2LQ14157 1087 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 WDR44Q5JSH3 913 aa6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 TSC1Q92574 1164 aa6.96□□□□□ -1.3
TOPBP1-205ENST00000506779 NEURL1BA8MQ27 555 aa6.95□□□□□ -1.3
TOPBP1-205ENST00000506779 APBA3O96018 575 aa6.95□□□□□ -1.3
TOPBP1-205ENST00000506779 RAB15P59190 212 aa6.95□□□□□ -1.3
TOPBP1-205ENST00000506779 SLC27A3Q5K4L6 730 aa6.95□□□□□ -1.3
TOPBP1-205ENST00000506779 PDXDC2PQ6P474 469 aa6.95□□□□□ -1.3
TOPBP1-205ENST00000506779 ZBTB33Q86T24 672 aa6.95□□□□□ -1.3
TOPBP1-205ENST00000506779 ARAFP10398 606 aa6.94□□□□□ -1.3
TOPBP1-205ENST00000506779 CTBSQ01459 385 aa6.94□□□□□ -1.3
TOPBP1-205ENST00000506779 SPATA31C2B4DYI2 1134 aa6.93□□□□□ -1.3
TOPBP1-205ENST00000506779 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
TOPBP1-205ENST00000506779 ATXN7L1Q9ULK2 861 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-205ENST00000506779 PRRT3Q5FWE3 981 aa6.92□□□□□ -1.3
TOPBP1-205ENST00000506779 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms