RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 PTGIRP43119 386 aa9.87□□□□□ -0.83
PDE4D-215ENST00000506510 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
PDE4D-215ENST00000506510 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
PDE4D-215ENST00000506510 ESF1Q9H501 851 aaKnown RBP9.87□□□□□ -0.83
PDE4D-215ENST00000506510 A6NJR5 290 aa9.86□□□□□ -0.83
PDE4D-215ENST00000506510 CYP2U1Q7Z449 544 aa9.86□□□□□ -0.83
PDE4D-215ENST00000506510 PLPP7Q8NBV4 271 aa9.86□□□□□ -0.83
PDE4D-215ENST00000506510 FIGNL2A6NMB9 653 aa9.85□□□□□ -0.83
PDE4D-215ENST00000506510 MYCP01106 439 aaPredicted RBP9.85□□□□□ -0.83
PDE4D-215ENST00000506510 CHIC2Q9UKJ5 165 aa9.85□□□□□ -0.83
PDE4D-215ENST00000506510 TRAK2O60296 914 aa9.84□□□□□ -0.83
PDE4D-215ENST00000506510 HDGFL1Q5TGJ6 251 aa9.84□□□□□ -0.83
PDE4D-215ENST00000506510 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
PDE4D-215ENST00000506510 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
PDE4D-215ENST00000506510 MEN1O00255 615 aa9.83□□□□□ -0.84
PDE4D-215ENST00000506510 SKIP12755 728 aa9.83□□□□□ -0.84
PDE4D-215ENST00000506510 FOXD4L5Q5VV16 416 aaPredicted RBP9.83□□□□□ -0.84
PDE4D-215ENST00000506510 RAB6BQ9NRW1 208 aa9.83□□□□□ -0.84
PDE4D-215ENST00000506510 A0A1W2PRU2 124 aa9.82□□□□□ -0.84
PDE4D-215ENST00000506510 USP4Q13107 963 aa9.82□□□□□ -0.84
PDE4D-215ENST00000506510 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
PDE4D-215ENST00000506510 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
PDE4D-215ENST00000506510 GLMNQ92990 594 aa9.82□□□□□ -0.84
PDE4D-215ENST00000506510 VEGFBP49765 207 aa9.81□□□□□ -0.84
PDE4D-215ENST00000506510 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.81□□□□□ -0.84
PDE4D-215ENST00000506510 UCN2Q96RP3 112 aa9.81□□□□□ -0.84
PDE4D-215ENST00000506510 TERTO14746 1132 aaKnown RBP9.8□□□□□ -0.84
PDE4D-215ENST00000506510 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
PDE4D-215ENST00000506510 STAU1O95793 577 aaKnown RBP9.79□□□□□ -0.84
PDE4D-215ENST00000506510 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 GNRH1P01148 92 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
PDE4D-215ENST00000506510 CLN3Q13286 438 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 NCOA4Q13772 614 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 NFATC2IPQ8NCF5 419 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
PDE4D-215ENST00000506510 IL2RAP01589 272 aa9.77□□□□□ -0.85
PDE4D-215ENST00000506510 RNF144AP50876 292 aaPredicted RBP9.77□□□□□ -0.85
PDE4D-215ENST00000506510 EML3Q32P44 896 aa9.77□□□□□ -0.85
PDE4D-215ENST00000506510 TBC1D9Q6ZT07 1266 aa9.77□□□□□ -0.85
PDE4D-215ENST00000506510 NLRP3Q96P20 1036 aa9.77□□□□□ -0.85
PDE4D-215ENST00000506510 WFS1O76024 890 aa9.76□□□□□ -0.85
PDE4D-215ENST00000506510 PTSQ03393 145 aa9.76□□□□□ -0.85
PDE4D-215ENST00000506510 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
PDE4D-215ENST00000506510 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
PDE4D-215ENST00000506510 SLC27A3Q5K4L6 730 aa9.75□□□□□ -0.85
PDE4D-215ENST00000506510 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
PDE4D-215ENST00000506510 LYSMD3Q7Z3D4 306 aa9.75□□□□□ -0.85
PDE4D-215ENST00000506510 CNKSR1Q969H4 720 aa9.75□□□□□ -0.85
PDE4D-215ENST00000506510 ETNK1Q9HBU6 452 aa9.75□□□□□ -0.85
PDE4D-215ENST00000506510 ZNF777Q9ULD5 760 aaPredicted RBP9.75□□□□□ -0.85
PDE4D-215ENST00000506510 GPC1P35052 558 aa9.74□□□□□ -0.85
PDE4D-215ENST00000506510 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
PDE4D-215ENST00000506510 ESYT1Q9BSJ8 1104 aa9.74□□□□□ -0.85
PDE4D-215ENST00000506510 USP17L3A6NCW0 530 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 USP17L4A6NCW7 530 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 H3BM21 787 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 ATP9BO43861 1147 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 RHOQP17081 205 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 LCE2AQ5TA79 106 aaPredicted RBP9.73□□□□□ -0.85
PDE4D-215ENST00000506510 USP17L2Q6R6M4 530 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 USP17L1Q7RTZ2 530 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
PDE4D-215ENST00000506510 SCNN1DP51172 638 aa9.72□□□□□ -0.85
PDE4D-215ENST00000506510 ESCO1Q5FWF5 840 aa9.72□□□□□ -0.85
PDE4D-215ENST00000506510 NPAS3Q8IXF0 933 aa9.72□□□□□ -0.85
PDE4D-215ENST00000506510 CCDC155Q8N6L0 562 aa9.72□□□□□ -0.85
PDE4D-215ENST00000506510 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
PDE4D-215ENST00000506510 SLC35F4A4IF30 521 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 LZTS3O60299 673 aaPredicted RBP9.71□□□□□ -0.86
PDE4D-215ENST00000506510 GDF10P55107 478 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 GTF2IP78347 998 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 CENPCQ03188 943 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 XAGE2Q96GT9 111 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 GRIP2Q9C0E4 1043 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 ZMYND15Q9H091 742 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 PCDHGA11Q9Y5H2 935 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
PDE4D-215ENST00000506510 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
PDE4D-215ENST00000506510 PSME1Q06323 249 aa9.7□□□□□ -0.86
PDE4D-215ENST00000506510 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
PDE4D-215ENST00000506510 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
PDE4D-215ENST00000506510 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
PDE4D-215ENST00000506510 POU4F2Q12837 409 aa9.69□□□□□ -0.86
PDE4D-215ENST00000506510 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
PDE4D-215ENST00000506510 TLR1Q15399 786 aa9.69□□□□□ -0.86
PDE4D-215ENST00000506510 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
PDE4D-215ENST00000506510 TMEM229AB2RXF0 380 aa9.68□□□□□ -0.86
PDE4D-215ENST00000506510 INHAP05111 366 aa9.68□□□□□ -0.86
PDE4D-215ENST00000506510 IRF7Q92985 503 aa9.68□□□□□ -0.86
PDE4D-215ENST00000506510 ZSCAN10Q96SZ4 725 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-215ENST00000506510 PPP1R12CQ9BZL4 782 aa9.68□□□□□ -0.86
PDE4D-215ENST00000506510 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-215ENST00000506510 SERTAD1Q9UHV2 236 aa9.67□□□□□ -0.86
PDE4D-215ENST00000506510 TMEM214Q6NUQ4 689 aaKnown RBP9.66□□□□□ -0.86
PDE4D-215ENST00000506510 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
PDE4D-215ENST00000506510 TRIM50Q86XT4 487 aa9.66□□□□□ -0.86
PDE4D-215ENST00000506510 NBPF15Q8N660 670 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms