RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
RCN1-202ENST00000506388 DLG5Q8TDM6 1919 aa17.65■□□□□ 0.42
RCN1-202ENST00000506388 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.42
RCN1-202ENST00000506388 GLI3P10071 1580 aa17.64■□□□□ 0.41
RCN1-202ENST00000506388 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
RCN1-202ENST00000506388 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
RCN1-202ENST00000506388 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
RCN1-202ENST00000506388 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
RCN1-202ENST00000506388 PLEKHO1Q53GL0 409 aaPredicted RBP17.63■□□□□ 0.41
RCN1-202ENST00000506388 GJD4Q96KN9 370 aaPredicted RBP17.63■□□□□ 0.41
RCN1-202ENST00000506388 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
RCN1-202ENST00000506388 SHANK3Q9BYB0 1731 aa17.63■□□□□ 0.41
RCN1-202ENST00000506388 THSD7AQ9UPZ6 1657 aa17.63■□□□□ 0.41
RCN1-202ENST00000506388 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
RCN1-202ENST00000506388 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
RCN1-202ENST00000506388 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
RCN1-202ENST00000506388 APAF1O14727 1248 aa17.61■□□□□ 0.41
RCN1-202ENST00000506388 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
RCN1-202ENST00000506388 ADAMTS7Q9UKP4 1686 aa17.61■□□□□ 0.41
RCN1-202ENST00000506388 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
RCN1-202ENST00000506388 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
RCN1-202ENST00000506388 QTRT2Q9H974 415 aaKnown RBP17.6■□□□□ 0.41
RCN1-202ENST00000506388 LRRC37A3O60309 1634 aa17.59■□□□□ 0.41
RCN1-202ENST00000506388 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
RCN1-202ENST00000506388 USP35Q9P2H5 1018 aa17.58■□□□□ 0.41
RCN1-202ENST00000506388 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.4
RCN1-202ENST00000506388 ZBED9Q6R2W3 1325 aa17.58■□□□□ 0.4
RCN1-202ENST00000506388 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.4
RCN1-202ENST00000506388 ZCRB1Q8TBF4 217 aaKnown RBP17.58■□□□□ 0.4
RCN1-202ENST00000506388 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
RCN1-202ENST00000506388 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
RCN1-202ENST00000506388 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
RCN1-202ENST00000506388 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
RCN1-202ENST00000506388 AKAP4Q5JQC9 854 aa17.57■□□□□ 0.4
RCN1-202ENST00000506388 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
RCN1-202ENST00000506388 RIPK4P57078 832 aa17.56■□□□□ 0.4
RCN1-202ENST00000506388 RBM6P78332 1123 aaKnown RBP17.56■□□□□ 0.4
RCN1-202ENST00000506388 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
RCN1-202ENST00000506388 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
RCN1-202ENST00000506388 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
RCN1-202ENST00000506388 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
RCN1-202ENST00000506388 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
RCN1-202ENST00000506388 IFNL2Q8IZJ0 200 aa17.55■□□□□ 0.4
RCN1-202ENST00000506388 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
RCN1-202ENST00000506388 EXOC5O00471 708 aa17.55■□□□□ 0.4
RCN1-202ENST00000506388 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
RCN1-202ENST00000506388 CEMIPQ8WUJ3 1361 aa17.54■□□□□ 0.4
RCN1-202ENST00000506388 CYP27B1O15528 508 aa17.54■□□□□ 0.4
RCN1-202ENST00000506388 PHKG2P15735 406 aa17.54■□□□□ 0.4
RCN1-202ENST00000506388 ZNF530Q6P9A1 599 aaPredicted RBP17.54■□□□□ 0.4
RCN1-202ENST00000506388 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
RCN1-202ENST00000506388 DDB1Q16531 1140 aa17.53■□□□□ 0.4
RCN1-202ENST00000506388 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
RCN1-202ENST00000506388 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
RCN1-202ENST00000506388 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
RCN1-202ENST00000506388 BCL9O00512 1426 aa17.52■□□□□ 0.4
RCN1-202ENST00000506388 PDE3BQ13370 1112 aa17.52■□□□□ 0.39
RCN1-202ENST00000506388 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.39
RCN1-202ENST00000506388 IL16Q14005 1332 aa17.51■□□□□ 0.39
RCN1-202ENST00000506388 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
RCN1-202ENST00000506388 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
RCN1-202ENST00000506388 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
RCN1-202ENST00000506388 MRC1P22897 1456 aa17.5■□□□□ 0.39
RCN1-202ENST00000506388 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
RCN1-202ENST00000506388 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
RCN1-202ENST00000506388 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
RCN1-202ENST00000506388 RXRBP28702 533 aa17.48■□□□□ 0.39
RCN1-202ENST00000506388 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
RCN1-202ENST00000506388 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
RCN1-202ENST00000506388 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
RCN1-202ENST00000506388 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
RCN1-202ENST00000506388 POTEAQ6S8J7 498 aa17.47■□□□□ 0.39
RCN1-202ENST00000506388 SEPT12Q8IYM1 358 aa17.47■□□□□ 0.39
RCN1-202ENST00000506388 TOGARAM1Q9Y4F4 1720 aa17.46■□□□□ 0.39
RCN1-202ENST00000506388 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
RCN1-202ENST00000506388 GOLGA2Q08379 1002 aa17.46■□□□□ 0.39
RCN1-202ENST00000506388 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
RCN1-202ENST00000506388 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
RCN1-202ENST00000506388 DDX54Q8TDD1 881 aaKnown RBP17.45■□□□□ 0.38
RCN1-202ENST00000506388 ITGB4P16144 1822 aa17.45■□□□□ 0.38
RCN1-202ENST00000506388 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
RCN1-202ENST00000506388 MPRIPQ6WCQ1 1025 aa17.45■□□□□ 0.38
RCN1-202ENST00000506388 IFT57Q9NWB7 429 aa17.45■□□□□ 0.38
RCN1-202ENST00000506388 MCM10Q7L590 875 aa17.44■□□□□ 0.38
RCN1-202ENST00000506388 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
RCN1-202ENST00000506388 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
RCN1-202ENST00000506388 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
RCN1-202ENST00000506388 E9PSI1 815 aa17.43■□□□□ 0.38
RCN1-202ENST00000506388 GNAI1P63096 354 aa17.43■□□□□ 0.38
RCN1-202ENST00000506388 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
RCN1-202ENST00000506388 SBF2Q86WG5 1849 aa17.43■□□□□ 0.38
RCN1-202ENST00000506388 KDM3BQ7LBC6 1761 aa17.43■□□□□ 0.38
RCN1-202ENST00000506388 DOT1LQ8TEK3 1739 aa17.42■□□□□ 0.38
RCN1-202ENST00000506388 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
RCN1-202ENST00000506388 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
RCN1-202ENST00000506388 SLC52A2Q9HAB3 445 aa17.42■□□□□ 0.38
RCN1-202ENST00000506388 CHL1O00533 1208 aa17.42■□□□□ 0.38
RCN1-202ENST00000506388 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
RCN1-202ENST00000506388 RGS12O14924 1447 aa17.41■□□□□ 0.38
RCN1-202ENST00000506388 TEFQ10587 303 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms