RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 FAM182BQ5T319 152 aa30.73■■■□□ 2.51
SPOCK1-204ENST00000505690 ZCRB1Q8TBF4 217 aaKnown RBP30.73■■■□□ 2.51
SPOCK1-204ENST00000505690 MARCH10Q8NA82 808 aaPredicted RBP30.71■■■□□ 2.51
SPOCK1-204ENST00000505690 HMOX1P09601 288 aa30.7■■■□□ 2.51
SPOCK1-204ENST00000505690 PLEKHG2Q9H7P9 1386 aa30.69■■■□□ 2.5
SPOCK1-204ENST00000505690 PKD1L3Q7Z443 1732 aa30.69■■■□□ 2.5
SPOCK1-204ENST00000505690 SHANK3Q9BYB0 1731 aa30.69■■■□□ 2.5
SPOCK1-204ENST00000505690 FAM196AQ6ZSG2 479 aa30.67■■■□□ 2.5
SPOCK1-204ENST00000505690 DDX54Q8TDD1 881 aaKnown RBP30.67■■■□□ 2.5
SPOCK1-204ENST00000505690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.66■■■□□ 2.5
SPOCK1-204ENST00000505690 SPG7Q9UQ90 795 aa30.66■■■□□ 2.5
SPOCK1-204ENST00000505690 U2AF1L5P0DN76 240 aaPredicted RBP30.65■■■□□ 2.5
SPOCK1-204ENST00000505690 U2AF1Q01081 240 aaKnown RBP eCLIP30.65■■■□□ 2.5
SPOCK1-204ENST00000505690 PCDH11XQ9BZA7 1347 aa30.65■■■□□ 2.5
SPOCK1-204ENST00000505690 PCDH11YQ9BZA8 1340 aa30.65■■■□□ 2.5
SPOCK1-204ENST00000505690 SOCS7O14512 581 aa30.63■■■□□ 2.49
SPOCK1-204ENST00000505690 PLEKHO1Q53GL0 409 aaPredicted RBP30.62■■■□□ 2.49
SPOCK1-204ENST00000505690 BCL9O00512 1426 aa30.62■■■□□ 2.49
SPOCK1-204ENST00000505690 AMOTQ4VCS5 1084 aa30.61■■■□□ 2.49
SPOCK1-204ENST00000505690 UPF1Q92900 1129 aaKnown RBP eCLIP30.6■■■□□ 2.49
SPOCK1-204ENST00000505690 CYP27B1O15528 508 aa30.59■■■□□ 2.49
SPOCK1-204ENST00000505690 RSPH6AQ9H0K4 717 aa30.59■■■□□ 2.49
SPOCK1-204ENST00000505690 FCHSD2O94868 740 aa30.57■■■□□ 2.48
SPOCK1-204ENST00000505690 PRKAR2BP31323 418 aa30.56■■■□□ 2.48
SPOCK1-204ENST00000505690 IFNL2Q8IZJ0 200 aa30.55■■■□□ 2.48
SPOCK1-204ENST00000505690 SBF2Q86WG5 1849 aa30.54■■■□□ 2.48
SPOCK1-204ENST00000505690 TRIM37O94972 964 aa30.54■■■□□ 2.48
SPOCK1-204ENST00000505690 PHKG2P15735 406 aa30.54■■■□□ 2.48
SPOCK1-204ENST00000505690 ZNF530Q6P9A1 599 aaPredicted RBP30.54■■■□□ 2.48
SPOCK1-204ENST00000505690 CCDC184Q52MB2 194 aa30.53■■■□□ 2.48
SPOCK1-204ENST00000505690 CCDC125Q86Z20 511 aa30.53■■■□□ 2.48
SPOCK1-204ENST00000505690 DIEXFQ68CQ4 756 aaKnown RBP30.52■■■□□ 2.48
SPOCK1-204ENST00000505690 WDR43Q15061 677 aaKnown RBP eCLIP30.51■■■□□ 2.47
SPOCK1-204ENST00000505690 ACSBG1Q96GR2 724 aa30.51■■■□□ 2.47
SPOCK1-204ENST00000505690 NKX1-1Q15270 411 aaPredicted RBP30.5■■■□□ 2.47
SPOCK1-204ENST00000505690 MTHFSDQ2M296 383 aaKnown RBP30.5■■■□□ 2.47
SPOCK1-204ENST00000505690 DOT1LQ8TEK3 1739 aa30.5■■■□□ 2.47
SPOCK1-204ENST00000505690 NHSQ6T4R5 1651 aa30.49■■■□□ 2.47
SPOCK1-204ENST00000505690 SF3B2Q13435 895 aaKnown RBP30.49■■■□□ 2.47
SPOCK1-204ENST00000505690 C1orf141Q5JVX7 400 aa30.49■■■□□ 2.47
SPOCK1-204ENST00000505690 TNS1Q9HBL0 1735 aaKnown RBP30.49■■■□□ 2.47
SPOCK1-204ENST00000505690 PHACTR3Q96KR7 559 aa30.48■■■□□ 2.47
SPOCK1-204ENST00000505690 MRS2Q9HD23 443 aa30.48■■■□□ 2.47
SPOCK1-204ENST00000505690 EP400Q96L91 3159 aa30.48■■■□□ 2.47
SPOCK1-204ENST00000505690 BCL11BQ9C0K0 894 aaPredicted RBP30.47■■■□□ 2.47
SPOCK1-204ENST00000505690 PNNQ9H307 717 aaKnown RBP30.47■■■□□ 2.47
SPOCK1-204ENST00000505690 KCNQ2O43526 872 aa30.46■■■□□ 2.47
SPOCK1-204ENST00000505690 HSP90AB1P08238 724 aaKnown RBP30.46■■■□□ 2.47
SPOCK1-204ENST00000505690 GAS2L2Q8NHY3 880 aa30.46■■■□□ 2.47
SPOCK1-204ENST00000505690 AKAP4Q5JQC9 854 aa30.45■■■□□ 2.47
SPOCK1-204ENST00000505690 PTF1AQ7RTS3 328 aa30.45■■■□□ 2.47
SPOCK1-204ENST00000505690 PLEKHF1Q96S99 279 aa30.45■■■□□ 2.47
SPOCK1-204ENST00000505690 TOGARAM1Q9Y4F4 1720 aa30.44■■■□□ 2.46
SPOCK1-204ENST00000505690 NEFMP07197 916 aa30.44■■■□□ 2.46
SPOCK1-204ENST00000505690 PRIM1P49642 420 aaKnown RBP30.43■■■□□ 2.46
SPOCK1-204ENST00000505690 ADAMTS8Q9UP79 889 aa30.43■■■□□ 2.46
SPOCK1-204ENST00000505690 SYTL4Q96C24 671 aaPredicted RBP30.42■■■□□ 2.46
SPOCK1-204ENST00000505690 DCAF5Q96JK2 942 aa30.42■■■□□ 2.46
SPOCK1-204ENST00000505690 APBA3O96018 575 aa30.41■■■□□ 2.46
SPOCK1-204ENST00000505690 KDM6AO15550 1401 aaPredicted RBP30.4■■■□□ 2.46
SPOCK1-204ENST00000505690 BAG6P46379 1132 aa30.4■■■□□ 2.46
SPOCK1-204ENST00000505690 MAPK8IP3Q9UPT6 1336 aa30.4■■■□□ 2.46
SPOCK1-204ENST00000505690 KAT6BQ8WYB5 2073 aa30.4■■■□□ 2.46
SPOCK1-204ENST00000505690 MPRIPQ6WCQ1 1025 aa30.39■■■□□ 2.46
SPOCK1-204ENST00000505690 PNISRQ8TF01 805 aaKnown RBP30.38■■■□□ 2.45
SPOCK1-204ENST00000505690 MAP3K5Q99683 1374 aa30.38■■■□□ 2.45
SPOCK1-204ENST00000505690 DEFB132Q7Z7B7 95 aa30.37■■■□□ 2.45
SPOCK1-204ENST00000505690 BTAF1O14981 1849 aa30.37■■■□□ 2.45
SPOCK1-204ENST00000505690 ITGB4P16144 1822 aa30.36■■■□□ 2.45
SPOCK1-204ENST00000505690 GNAT3A8MTJ3 354 aa30.36■■■□□ 2.45
SPOCK1-204ENST00000505690 CCDC146Q8IYE0 955 aa30.36■■■□□ 2.45
SPOCK1-204ENST00000505690 ERVV-2B6SEH9 535 aa30.35■■■□□ 2.45
SPOCK1-204ENST00000505690 SCN11AQ9UI33 1791 aa30.35■■■□□ 2.45
SPOCK1-204ENST00000505690 EN1Q05925 392 aaPredicted RBP30.34■■■□□ 2.45
SPOCK1-204ENST00000505690 RUNDC1Q96C34 613 aa30.34■■■□□ 2.45
SPOCK1-204ENST00000505690 ADAMTS7Q9UKP4 1686 aa30.33■■■□□ 2.45
SPOCK1-204ENST00000505690 RNMTO43148 476 aaKnown RBP30.33■■■□□ 2.45
SPOCK1-204ENST00000505690 LGR6Q9HBX8 967 aa30.33■■■□□ 2.45
SPOCK1-204ENST00000505690 TMOD3Q9NYL9 352 aa30.33■■■□□ 2.45
SPOCK1-204ENST00000505690 NFE2L2Q16236 605 aa30.32■■■□□ 2.44
SPOCK1-204ENST00000505690 CCER2I3L3R5 266 aa30.31■■■□□ 2.44
SPOCK1-204ENST00000505690 PLSCR1O15162 318 aa30.31■■■□□ 2.44
SPOCK1-204ENST00000505690 CABP4P57796 275 aa30.31■■■□□ 2.44
SPOCK1-204ENST00000505690 PIGBQ92521 554 aa30.31■■■□□ 2.44
SPOCK1-204ENST00000505690 VIRMAQ69YN4 1812 aaKnown RBP30.31■■■□□ 2.44
SPOCK1-204ENST00000505690 RGPD3A6NKT7 1758 aaPredicted RBP30.3■■■□□ 2.44
SPOCK1-204ENST00000505690 RGPD4Q7Z3J3 1758 aa30.3■■■□□ 2.44
SPOCK1-204ENST00000505690 CAMKK2Q96RR4 588 aa30.29■■■□□ 2.44
SPOCK1-204ENST00000505690 EZH2Q15910 746 aaKnown RBP30.28■■■□□ 2.44
SPOCK1-204ENST00000505690 MIER1Q8N108 512 aa30.28■■■□□ 2.44
SPOCK1-204ENST00000505690 IL17REQ8NFR9 667 aa30.28■■■□□ 2.44
SPOCK1-204ENST00000505690 RTF1Q92541 710 aaKnown RBP30.28■■■□□ 2.44
SPOCK1-204ENST00000505690 DLG5Q8TDM6 1919 aa30.28■■■□□ 2.44
SPOCK1-204ENST00000505690 MRC1P22897 1456 aa30.27■■■□□ 2.44
SPOCK1-204ENST00000505690 HTATSF1O43719 755 aaKnown RBP30.27■■■□□ 2.44
SPOCK1-204ENST00000505690 SLC52A2Q9HAB3 445 aa30.26■■■□□ 2.43
SPOCK1-204ENST00000505690 TMPOP42166 694 aaKnown RBP30.25■■■□□ 2.43
SPOCK1-204ENST00000505690 NFATC2IPQ8NCF5 419 aa30.25■■■□□ 2.43
SPOCK1-204ENST00000505690 CEMIPQ8WUJ3 1361 aa30.25■■■□□ 2.43
SPOCK1-204ENST00000505690 RIPK4P57078 832 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms