RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
HMGB1P29-201ENST00000505659 TREML4Q6UXN2 200 aa7.48□□□□□ -1.21
HMGB1P29-201ENST00000505659 DOLKQ9UPQ8 538 aa7.48□□□□□ -1.21
HMGB1P29-201ENST00000505659 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
HMGB1P29-201ENST00000505659 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
HMGB1P29-201ENST00000505659 RNF217Q8TC41 542 aa7.47□□□□□ -1.21
HMGB1P29-201ENST00000505659 ALG2Q9H553 416 aa7.47□□□□□ -1.21
HMGB1P29-201ENST00000505659 RAB6BQ9NRW1 208 aa7.47□□□□□ -1.21
HMGB1P29-201ENST00000505659 NXF1Q9UBU9 619 aaKnown RBP7.47□□□□□ -1.21
HMGB1P29-201ENST00000505659 MEN1O00255 615 aa7.46□□□□□ -1.22
HMGB1P29-201ENST00000505659 TRAK2O60296 914 aa7.46□□□□□ -1.22
HMGB1P29-201ENST00000505659 WFS1O76024 890 aa7.46□□□□□ -1.22
HMGB1P29-201ENST00000505659 ARHGEF10LQ9HCE6 1279 aa7.46□□□□□ -1.22
HMGB1P29-201ENST00000505659 A0A1W2PRU2 124 aa7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 SOX11P35716 441 aa7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 PROSER2Q86WR7 435 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 CCDC125Q86Z20 511 aa7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 WWC1Q8IX03 1113 aa7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 FNBP4Q8N3X1 1017 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 CHIC2Q9UKJ5 165 aa7.45□□□□□ -1.22
HMGB1P29-201ENST00000505659 PTSQ03393 145 aa7.44□□□□□ -1.22
HMGB1P29-201ENST00000505659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.44□□□□□ -1.22
HMGB1P29-201ENST00000505659 CYP2U1Q7Z449 544 aa7.44□□□□□ -1.22
HMGB1P29-201ENST00000505659 ERBB4Q15303 1308 aa7.44□□□□□ -1.22
HMGB1P29-201ENST00000505659 H3BM21 787 aa7.43□□□□□ -1.22
HMGB1P29-201ENST00000505659 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P29-201ENST00000505659 IL2RAP01589 272 aa7.42□□□□□ -1.22
HMGB1P29-201ENST00000505659 RHOQP17081 205 aa7.42□□□□□ -1.22
HMGB1P29-201ENST00000505659 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
HMGB1P29-201ENST00000505659 PRICKLE2Q7Z3G6 844 aa7.42□□□□□ -1.22
HMGB1P29-201ENST00000505659 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
HMGB1P29-201ENST00000505659 ESF1Q9H501 851 aaKnown RBP7.42□□□□□ -1.22
HMGB1P29-201ENST00000505659 PPFIA3O75145 1194 aa7.41□□□□□ -1.22
HMGB1P29-201ENST00000505659 SKIP12755 728 aa7.41□□□□□ -1.22
HMGB1P29-201ENST00000505659 CLN3Q13286 438 aa7.41□□□□□ -1.22
HMGB1P29-201ENST00000505659 DEPDC4Q8N2C3 294 aa7.41□□□□□ -1.22
HMGB1P29-201ENST00000505659 SENP3-EIF4A1A0A087X0R7 540 aa7.4□□□□□ -1.22
HMGB1P29-201ENST00000505659 RNF144AP50876 292 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P29-201ENST00000505659 SLC35F4A4IF30 521 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 A6NJR5 290 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 GNRH1P01148 92 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 USP4Q13107 963 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 TBC1D9Q6ZT07 1266 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 LYSMD3Q7Z3D4 306 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 CCDC155Q8N6L0 562 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 GLMNQ92990 594 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 CNKSR1Q969H4 720 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 TRIM52Q96A61 297 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 NLRP3Q96P20 1036 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 ETNK1Q9HBU6 452 aa7.39□□□□□ -1.23
HMGB1P29-201ENST00000505659 USP17L5A8MUK1 530 aa7.38□□□□□ -1.23
HMGB1P29-201ENST00000505659 GMPRP36959 345 aa7.38□□□□□ -1.23
HMGB1P29-201ENST00000505659 NCOA4Q13772 614 aa7.38□□□□□ -1.23
HMGB1P29-201ENST00000505659 NPAS3Q8IXF0 933 aa7.38□□□□□ -1.23
HMGB1P29-201ENST00000505659 SLC16A10Q8TF71 515 aa7.38□□□□□ -1.23
HMGB1P29-201ENST00000505659 GPC1P35052 558 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 SCNN1DP51172 638 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 POU4F2Q12837 409 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 SLC27A3Q5K4L6 730 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 ESYT1Q9BSJ8 1104 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 GRIP2Q9C0E4 1043 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 HRH3Q9Y5N1 445 aa7.37□□□□□ -1.23
HMGB1P29-201ENST00000505659 CENPCQ03188 943 aa7.36□□□□□ -1.23
HMGB1P29-201ENST00000505659 IRF7Q92985 503 aa7.36□□□□□ -1.23
HMGB1P29-201ENST00000505659 XAGE2Q96GT9 111 aa7.36□□□□□ -1.23
HMGB1P29-201ENST00000505659 CUEDC1Q9NWM3 386 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P29-201ENST00000505659 PCDHGA11Q9Y5H2 935 aa7.36□□□□□ -1.23
HMGB1P29-201ENST00000505659 USP17L3A6NCW0 530 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 USP17L4A6NCW7 530 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 GDF10P55107 478 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 EML3Q32P44 896 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 USP17L2Q6R6M4 530 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 USP17L1Q7RTZ2 530 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 GPR161Q8N6U8 529 aaKnown RBP7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 SIRT1Q96EB6 747 aa7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 FHDC1Q9C0D6 1143 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P29-201ENST00000505659 VSIG8P0DPA2 414 aa7.34□□□□□ -1.23
HMGB1P29-201ENST00000505659 ITGA6P23229 1130 aa7.34□□□□□ -1.23
HMGB1P29-201ENST00000505659 GTF2IP78347 998 aa7.34□□□□□ -1.23
HMGB1P29-201ENST00000505659 NBPF10Q6P3W6 841 aaKnown RBP7.34□□□□□ -1.23
HMGB1P29-201ENST00000505659 NBPF15Q8N660 670 aa7.34□□□□□ -1.23
HMGB1P29-201ENST00000505659 ZNF777Q9ULD5 760 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P29-201ENST00000505659 CDC14CA4D256 554 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 WIPF1O43516 503 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 ATP9BO43861 1147 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 PHKA2P46019 1235 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 TLR1Q15399 786 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 ZSCAN10Q96SZ4 725 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 SERTAD1Q9UHV2 236 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 KIAA1024Q9UPX6 916 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 NOD1Q9Y239 953 aa7.33□□□□□ -1.24
HMGB1P29-201ENST00000505659 SPATA31C2B4DYI2 1134 aa7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 WASLO00401 505 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 INHAP05111 366 aa7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 ESCO1Q5FWF5 840 aa7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms