RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.02
SMN2-205ENST00000505346 NSFL1CQ9UNZ2 370 aaKnown RBP8.65□□□□□ -1.02
SMN2-205ENST00000505346 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
SMN2-205ENST00000505346 H7C1W4 665 aa8.64□□□□□ -1.03
SMN2-205ENST00000505346 RHOQP17081 205 aa8.64□□□□□ -1.03
SMN2-205ENST00000505346 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
SMN2-205ENST00000505346 ADAM32Q8TC27 787 aa8.64□□□□□ -1.03
SMN2-205ENST00000505346 TRERF1Q96PN7 1200 aa8.64□□□□□ -1.03
SMN2-205ENST00000505346 ERVH48-1M5A8F1 160 aa8.63□□□□□ -1.03
SMN2-205ENST00000505346 RNF144AP50876 292 aaPredicted RBP8.63□□□□□ -1.03
SMN2-205ENST00000505346 DBN1Q16643 649 aa8.63□□□□□ -1.03
SMN2-205ENST00000505346 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
SMN2-205ENST00000505346 ACDQ96AP0 544 aa8.63□□□□□ -1.03
SMN2-205ENST00000505346 LILRA1O75019 489 aa8.62□□□□□ -1.03
SMN2-205ENST00000505346 NR6A1Q15406 480 aa8.62□□□□□ -1.03
SMN2-205ENST00000505346 DZIP3Q86Y13 1208 aaKnown RBP8.62□□□□□ -1.03
SMN2-205ENST00000505346 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
SMN2-205ENST00000505346 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
SMN2-205ENST00000505346 MX2P20592 715 aa8.61□□□□□ -1.03
SMN2-205ENST00000505346 BAG6P46379 1132 aa8.6□□□□□ -1.03
SMN2-205ENST00000505346 Q8N3U1 123 aa8.6□□□□□ -1.03
SMN2-205ENST00000505346 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
SMN2-205ENST00000505346 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
SMN2-205ENST00000505346 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
SMN2-205ENST00000505346 OCSTAMPQ9BR26 566 aa8.6□□□□□ -1.03
SMN2-205ENST00000505346 DYRK1BQ9Y463 629 aa8.6□□□□□ -1.03
SMN2-205ENST00000505346 OIP5O43482 229 aa8.58□□□□□ -1.04
SMN2-205ENST00000505346 PDE4DQ08499 809 aa8.58□□□□□ -1.04
SMN2-205ENST00000505346 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
SMN2-205ENST00000505346 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
SMN2-205ENST00000505346 KRTAP4-8Q9BYQ9 185 aa8.58□□□□□ -1.04
SMN2-205ENST00000505346 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
SMN2-205ENST00000505346 MEN1O00255 615 aa8.57□□□□□ -1.04
SMN2-205ENST00000505346 GPC1P35052 558 aa8.57□□□□□ -1.04
SMN2-205ENST00000505346 CYLDQ9NQC7 956 aa8.57□□□□□ -1.04
SMN2-205ENST00000505346 MKL2Q9ULH7 1088 aa8.57□□□□□ -1.04
SMN2-205ENST00000505346 FURINP09958 794 aa8.56□□□□□ -1.04
SMN2-205ENST00000505346 SEPT12Q8IYM1 358 aa8.56□□□□□ -1.04
SMN2-205ENST00000505346 KRBA1A5PL33 1030 aa8.55□□□□□ -1.04
SMN2-205ENST00000505346 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
SMN2-205ENST00000505346 OXCT2Q9BYC2 517 aaPredicted RBP8.55□□□□□ -1.04
SMN2-205ENST00000505346 ESPNB1AK53 854 aa8.54□□□□□ -1.04
SMN2-205ENST00000505346 MAP2K3P46734 347 aa8.54□□□□□ -1.04
SMN2-205ENST00000505346 SNRPNP63162 240 aaKnown RBP8.54□□□□□ -1.04
SMN2-205ENST00000505346 POU4F2Q12837 409 aa8.54□□□□□ -1.04
SMN2-205ENST00000505346 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
SMN2-205ENST00000505346 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
SMN2-205ENST00000505346 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
SMN2-205ENST00000505346 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
SMN2-205ENST00000505346 A0A1W2PRU2 124 aa8.52□□□□□ -1.05
SMN2-205ENST00000505346 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
SMN2-205ENST00000505346 WDR44Q5JSH3 913 aa8.5□□□□□ -1.05
SMN2-205ENST00000505346 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
SMN2-205ENST00000505346 NBPF15Q8N660 670 aa8.5□□□□□ -1.05
SMN2-205ENST00000505346 TIMMDC1Q9NPL8 285 aa8.5□□□□□ -1.05
SMN2-205ENST00000505346 AP1G2O75843 785 aa8.49□□□□□ -1.05
SMN2-205ENST00000505346 F11P03951 625 aa8.49□□□□□ -1.05
SMN2-205ENST00000505346 CFHR5Q9BXR6 569 aa8.49□□□□□ -1.05
SMN2-205ENST00000505346 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
SMN2-205ENST00000505346 PHF24Q9UPV7 400 aa8.49□□□□□ -1.05
SMN2-205ENST00000505346 SHISA8B8ZZ34 492 aa8.48□□□□□ -1.05
SMN2-205ENST00000505346 PIK3R2O00459 728 aa8.48□□□□□ -1.05
SMN2-205ENST00000505346 COL8A1P27658 744 aa8.48□□□□□ -1.05
SMN2-205ENST00000505346 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
SMN2-205ENST00000505346 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
SMN2-205ENST00000505346 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
SMN2-205ENST00000505346 GRIN2CQ14957 1233 aa8.47□□□□□ -1.05
SMN2-205ENST00000505346 EPS8L1Q8TE68 723 aa8.47□□□□□ -1.05
SMN2-205ENST00000505346 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
SMN2-205ENST00000505346 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
SMN2-205ENST00000505346 SPATA31C2B4DYI2 1134 aa8.46□□□□□ -1.06
SMN2-205ENST00000505346 AMPD1P23109 780 aa8.46□□□□□ -1.06
SMN2-205ENST00000505346 TAS1R3Q7RTX0 852 aa8.46□□□□□ -1.06
SMN2-205ENST00000505346 CLN3Q13286 438 aa8.45□□□□□ -1.06
SMN2-205ENST00000505346 ESF1Q9H501 851 aaKnown RBP8.45□□□□□ -1.06
SMN2-205ENST00000505346 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
SMN2-205ENST00000505346 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
SMN2-205ENST00000505346 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
SMN2-205ENST00000505346 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
SMN2-205ENST00000505346 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
SMN2-205ENST00000505346 CYP2U1Q7Z449 544 aa8.44□□□□□ -1.06
SMN2-205ENST00000505346 GOLGA6L1Q8N7Z2 621 aa8.44□□□□□ -1.06
SMN2-205ENST00000505346 PROCA1Q8NCQ7 364 aaPredicted RBP8.44□□□□□ -1.06
SMN2-205ENST00000505346 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
SMN2-205ENST00000505346 C1orf229Q6ZS94 237 aaPredicted RBP8.43□□□□□ -1.06
SMN2-205ENST00000505346 BCANQ96GW7 911 aa8.43□□□□□ -1.06
SMN2-205ENST00000505346 KRTAP9-2Q9BYQ4 174 aa8.43□□□□□ -1.06
SMN2-205ENST00000505346 PCDHB9Q9Y5E1 797 aa8.43□□□□□ -1.06
SMN2-205ENST00000505346 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
SMN2-205ENST00000505346 ERVK-9P63128 1117 aa8.42□□□□□ -1.06
SMN2-205ENST00000505346 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
SMN2-205ENST00000505346 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMN2-205ENST00000505346 GPAMQ9HCL2 828 aa8.42□□□□□ -1.06
SMN2-205ENST00000505346 GNB5O14775 395 aa8.41□□□□□ -1.06
SMN2-205ENST00000505346 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
SMN2-205ENST00000505346 HMX1Q9NP08 348 aaPredicted RBP8.41□□□□□ -1.06
SMN2-205ENST00000505346 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
SMN2-205ENST00000505346 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
SMN2-205ENST00000505346 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
SMN2-205ENST00000505346 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms