RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 OATP04181 439 aa7.4□□□□□ -1.23
CDH9-203ENST00000505045 TRIM67Q6ZTA4 783 aa7.4□□□□□ -1.23
CDH9-203ENST00000505045 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.23
CDH9-203ENST00000505045 SLC26A8Q96RN1 970 aa7.4□□□□□ -1.23
CDH9-203ENST00000505045 ADAMTS13Q76LX8 1427 aa7.39□□□□□ -1.23
CDH9-203ENST00000505045 PIP4K2BP78356 416 aa7.39□□□□□ -1.23
CDH9-203ENST00000505045 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
CDH9-203ENST00000505045 IL21Q9HBE4 155 aa7.39□□□□□ -1.23
CDH9-203ENST00000505045 SLC52A1Q9NWF4 448 aa7.39□□□□□ -1.23
CDH9-203ENST00000505045 MED1Q15648 1581 aaPredicted RBP7.39□□□□□ -1.23
CDH9-203ENST00000505045 NKTRP30414 1462 aaKnown RBP7.39□□□□□ -1.23
CDH9-203ENST00000505045 PLEKHG1Q9ULL1 1385 aa7.39□□□□□ -1.23
CDH9-203ENST00000505045 RNF40O75150 1001 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 HSPA1LP34931 641 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.38□□□□□ -1.23
CDH9-203ENST00000505045 EID1Q9Y6B2 187 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 NEXMIFQ5QGS0 1516 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 KIF1BO60333 1816 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 SETD1AO15047 1707 aaKnown RBP7.38□□□□□ -1.23
CDH9-203ENST00000505045 TMEM94Q12767 1356 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 DISP3Q9P2K9 1392 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 SLC10A3P09131 477 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 GPIHBP1Q8IV16 184 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 ZNF516Q92618 1163 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 ROBO1Q9Y6N7 1651 aa7.38□□□□□ -1.23
CDH9-203ENST00000505045 DIP2AQ14689 1571 aa7.37□□□□□ -1.23
CDH9-203ENST00000505045 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
CDH9-203ENST00000505045 ILDR2Q71H61 639 aa7.37□□□□□ -1.23
CDH9-203ENST00000505045 SETBP1Q9Y6X0 1596 aa7.37□□□□□ -1.23
CDH9-203ENST00000505045 PTPRUQ92729 1446 aa7.36□□□□□ -1.23
CDH9-203ENST00000505045 PPLO60437 1756 aa7.36□□□□□ -1.23
CDH9-203ENST00000505045 TOM1O60784 492 aa7.36□□□□□ -1.23
CDH9-203ENST00000505045 SLC4A3P48751 1232 aa7.35□□□□□ -1.23
CDH9-203ENST00000505045 PHOX2BQ99453 314 aa7.35□□□□□ -1.23
CDH9-203ENST00000505045 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
CDH9-203ENST00000505045 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.35□□□□□ -1.23
CDH9-203ENST00000505045 NALCNQ8IZF0 1738 aa7.34□□□□□ -1.23
CDH9-203ENST00000505045 IFT172Q9UG01 1749 aa7.34□□□□□ -1.23
CDH9-203ENST00000505045 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
CDH9-203ENST00000505045 ACTN4O43707 911 aaKnown RBP7.34□□□□□ -1.23
CDH9-203ENST00000505045 PPP1R15AO75807 674 aaPredicted RBP7.34□□□□□ -1.23
CDH9-203ENST00000505045 KCNA6P17658 529 aa7.34□□□□□ -1.23
CDH9-203ENST00000505045 PRR14Q9BWN1 585 aa7.34□□□□□ -1.23
CDH9-203ENST00000505045 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
CDH9-203ENST00000505045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.33□□□□□ -1.24
CDH9-203ENST00000505045 BCANQ96GW7 911 aa7.33□□□□□ -1.24
CDH9-203ENST00000505045 DAXXQ9UER7 740 aaPredicted RBP7.33□□□□□ -1.24
CDH9-203ENST00000505045 NKX2-3Q8TAU0 364 aa7.32□□□□□ -1.24
CDH9-203ENST00000505045 AAASQ9NRG9 546 aa7.32□□□□□ -1.24
CDH9-203ENST00000505045 METP08581 1390 aa7.32□□□□□ -1.24
CDH9-203ENST00000505045 COL16A1Q07092 1604 aaPredicted RBP7.32□□□□□ -1.24
CDH9-203ENST00000505045 PHLPP1O60346 1717 aa7.32□□□□□ -1.24
CDH9-203ENST00000505045 ZPR1O75312 459 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 CFHP08603 1231 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 COPS2P61201 443 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 KMT5BQ4FZB7 885 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 PROSER2Q86WR7 435 aaPredicted RBP7.31□□□□□ -1.24
CDH9-203ENST00000505045 PCDHB3Q9Y5E6 796 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 FAM187AA6NFU0 413 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 MAP2K5Q13163 448 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 TRIM52Q96A61 297 aa7.31□□□□□ -1.24
CDH9-203ENST00000505045 ASXL1Q8IXJ9 1541 aa7.3□□□□□ -1.24
CDH9-203ENST00000505045 FAM135BQ49AJ0 1406 aa7.3□□□□□ -1.24
CDH9-203ENST00000505045 NLRP7Q8WX94 980 aa7.3□□□□□ -1.24
CDH9-203ENST00000505045 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
CDH9-203ENST00000505045 MSH6P52701 1360 aa7.29□□□□□ -1.24
CDH9-203ENST00000505045 PIK3R4Q99570 1358 aa7.29□□□□□ -1.24
CDH9-203ENST00000505045 ZNF326Q5BKZ1 582 aaKnown RBP7.29□□□□□ -1.24
CDH9-203ENST00000505045 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH9-203ENST00000505045 SPATA31E1Q6ZUB1 1445 aa7.29□□□□□ -1.24
CDH9-203ENST00000505045 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
CDH9-203ENST00000505045 IRF6O14896 467 aa7.29□□□□□ -1.24
CDH9-203ENST00000505045 MINK1Q8N4C8 1332 aaPredicted RBP7.28□□□□□ -1.24
CDH9-203ENST00000505045 XP32Q5T750 250 aa7.28□□□□□ -1.24
CDH9-203ENST00000505045 AMOTL2Q9Y2J4 779 aa7.28□□□□□ -1.24
CDH9-203ENST00000505045 NHSL1Q5SYE7 1610 aa7.28□□□□□ -1.24
CDH9-203ENST00000505045 AHDC1Q5TGY3 1603 aaPredicted RBP7.28□□□□□ -1.24
CDH9-203ENST00000505045 RAB3GAP2Q9H2M9 1393 aa7.28□□□□□ -1.24
CDH9-203ENST00000505045 PRR20EP86478 221 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 PRR20CP86479 221 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 PRR20DP86480 221 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 PRR20BP86481 221 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 PRR20AP86496 221 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 CCDC144AA2RUR9 1427 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 MST1RQ04912 1400 aa7.27□□□□□ -1.25
CDH9-203ENST00000505045 PTCH1Q13635 1447 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 SETD5Q9C0A6 1442 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 ADGRL3Q9HAR2 1447 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 NCOA3Q9Y6Q9 1424 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 LRP6O75581 1613 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 ROBO2Q9HCK4 1378 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 KNDC1Q76NI1 1749 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 SHPRHQ149N8 1683 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
CDH9-203ENST00000505045 C11orf95C9JLR9 678 aaPredicted RBP7.26□□□□□ -1.25
CDH9-203ENST00000505045 LMOD2Q6P5Q4 547 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 MPHOSPH9Q99550 1183 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 SLAIN2Q9P270 581 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 DCCP43146 1447 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms