RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 KCNH5Q8NCM2 988 aa19.54■□□□□ 0.72
SNCAIP-207ENST00000504884 ABCC4O15439 1325 aa19.53■□□□□ 0.72
SNCAIP-207ENST00000504884 FOXO3O43524 673 aa19.53■□□□□ 0.72
SNCAIP-207ENST00000504884 SMC5Q8IY18 1101 aa19.53■□□□□ 0.72
SNCAIP-207ENST00000504884 IP6K1Q92551 441 aa19.53■□□□□ 0.72
SNCAIP-207ENST00000504884 PROSER2Q86WR7 435 aaPredicted RBP19.52■□□□□ 0.72
SNCAIP-207ENST00000504884 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
SNCAIP-207ENST00000504884 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
SNCAIP-207ENST00000504884 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
SNCAIP-207ENST00000504884 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
SNCAIP-207ENST00000504884 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
SNCAIP-207ENST00000504884 KRT24Q2M2I5 525 aa19.48■□□□□ 0.71
SNCAIP-207ENST00000504884 C19orf44Q9H6X5 657 aa19.48■□□□□ 0.71
SNCAIP-207ENST00000504884 BABAM1Q9NWV8 329 aa19.46■□□□□ 0.71
SNCAIP-207ENST00000504884 MIS18AQ9NYP9 233 aa19.46■□□□□ 0.71
SNCAIP-207ENST00000504884 NFAT5O94916 1531 aa19.46■□□□□ 0.71
SNCAIP-207ENST00000504884 PTPRCP08575 1304 aa19.46■□□□□ 0.71
SNCAIP-207ENST00000504884 INTS3Q68E01 1043 aaKnown RBP19.45■□□□□ 0.7
SNCAIP-207ENST00000504884 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
SNCAIP-207ENST00000504884 NUCB1Q02818 461 aa19.44■□□□□ 0.7
SNCAIP-207ENST00000504884 LTN1O94822 1766 aa19.44■□□□□ 0.7
SNCAIP-207ENST00000504884 GCP02774 474 aa19.43■□□□□ 0.7
SNCAIP-207ENST00000504884 MAP3K5Q99683 1374 aa19.43■□□□□ 0.7
SNCAIP-207ENST00000504884 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
SNCAIP-207ENST00000504884 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
SNCAIP-207ENST00000504884 KRT28Q7Z3Y7 464 aa19.43■□□□□ 0.7
SNCAIP-207ENST00000504884 SOS1Q07889 1333 aaPredicted RBP19.42■□□□□ 0.7
SNCAIP-207ENST00000504884 TAF7Q15545 349 aaPredicted RBP19.42■□□□□ 0.7
SNCAIP-207ENST00000504884 ARHGEF25Q86VW2 580 aa19.42■□□□□ 0.7
SNCAIP-207ENST00000504884 IL17REQ8NFR9 667 aa19.42■□□□□ 0.7
SNCAIP-207ENST00000504884 NBPF6Q5VWK0 638 aa19.41■□□□□ 0.7
SNCAIP-207ENST00000504884 NBPF4Q96M43 638 aa19.41■□□□□ 0.7
SNCAIP-207ENST00000504884 C1orf167Q5SNV9 1468 aa19.41■□□□□ 0.7
SNCAIP-207ENST00000504884 SEC24BO95487 1268 aa19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 CHD1LQ86WJ1 897 aa19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 USHBP1Q8N6Y0 703 aa19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 C1orf115Q9H7X2 142 aa19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 MSH6P52701 1360 aa19.4■□□□□ 0.7
SNCAIP-207ENST00000504884 UPF2Q9HAU5 1272 aaKnown RBP19.39■□□□□ 0.7
SNCAIP-207ENST00000504884 DAXXQ9UER7 740 aaPredicted RBP19.39■□□□□ 0.7
SNCAIP-207ENST00000504884 USP19O94966 1318 aa19.39■□□□□ 0.69
SNCAIP-207ENST00000504884 ZBTB7CA1YPR0 619 aa19.39■□□□□ 0.69
SNCAIP-207ENST00000504884 ATF3P18847 181 aa19.39■□□□□ 0.69
SNCAIP-207ENST00000504884 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.69
SNCAIP-207ENST00000504884 RGS12O14924 1447 aa19.38■□□□□ 0.69
SNCAIP-207ENST00000504884 NCOA3Q9Y6Q9 1424 aa19.38■□□□□ 0.69
SNCAIP-207ENST00000504884 SLIT3O75094 1523 aa19.38■□□□□ 0.69
SNCAIP-207ENST00000504884 SIRT2Q8IXJ6 389 aa19.38■□□□□ 0.69
SNCAIP-207ENST00000504884 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
SNCAIP-207ENST00000504884 CCDC30Q5VVM6 783 aa19.37■□□□□ 0.69
SNCAIP-207ENST00000504884 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
SNCAIP-207ENST00000504884 LRRC37A3O60309 1634 aa19.37■□□□□ 0.69
SNCAIP-207ENST00000504884 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
SNCAIP-207ENST00000504884 MST1RQ04912 1400 aa19.36■□□□□ 0.69
SNCAIP-207ENST00000504884 PLEKHO1Q53GL0 409 aaPredicted RBP19.36■□□□□ 0.69
SNCAIP-207ENST00000504884 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
SNCAIP-207ENST00000504884 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
SNCAIP-207ENST00000504884 AMOTQ4VCS5 1084 aa19.35■□□□□ 0.69
SNCAIP-207ENST00000504884 TMEM94Q12767 1356 aa19.35■□□□□ 0.69
SNCAIP-207ENST00000504884 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
SNCAIP-207ENST00000504884 CCT4P50991 539 aaKnown RBP19.34■□□□□ 0.69
SNCAIP-207ENST00000504884 CEMIPQ8WUJ3 1361 aa19.34■□□□□ 0.69
SNCAIP-207ENST00000504884 DCCP43146 1447 aa19.34■□□□□ 0.69
SNCAIP-207ENST00000504884 AKAP4Q5JQC9 854 aa19.33■□□□□ 0.69
SNCAIP-207ENST00000504884 G2E3Q7L622 706 aa19.33■□□□□ 0.69
SNCAIP-207ENST00000504884 LRRC59Q96AG4 307 aaKnown RBP19.33■□□□□ 0.69
SNCAIP-207ENST00000504884 ANKRD44Q8N8A2 993 aa19.33■□□□□ 0.68
SNCAIP-207ENST00000504884 ANKRD24Q8TF21 1146 aa19.33■□□□□ 0.68
SNCAIP-207ENST00000504884 DCTPP1Q9H773 170 aa19.33■□□□□ 0.68
SNCAIP-207ENST00000504884 CADPS2Q86UW7 1296 aa19.32■□□□□ 0.68
SNCAIP-207ENST00000504884 CHMP4AQ9BY43 222 aa19.32■□□□□ 0.68
SNCAIP-207ENST00000504884 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
SNCAIP-207ENST00000504884 TBC1D32Q96NH3 1257 aa19.31■□□□□ 0.68
SNCAIP-207ENST00000504884 PLEKHG5O94827 1062 aa19.3■□□□□ 0.68
SNCAIP-207ENST00000504884 ZNF530Q6P9A1 599 aaPredicted RBP19.3■□□□□ 0.68
SNCAIP-207ENST00000504884 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
SNCAIP-207ENST00000504884 FLIIQ13045 1269 aa19.29■□□□□ 0.68
SNCAIP-207ENST00000504884 SLC4A10Q6U841 1118 aa19.29■□□□□ 0.68
SNCAIP-207ENST00000504884 SLC4A3P48751 1232 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 CEP85Q6P2H3 762 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 MEIS3Q99687 375 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 AXIN2Q9Y2T1 843 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 TEFQ10587 303 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 NBR1Q14596 966 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 C1orf141Q5JVX7 400 aa19.28■□□□□ 0.68
SNCAIP-207ENST00000504884 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
SNCAIP-207ENST00000504884 F6X3S4 739 aa19.27■□□□□ 0.68
SNCAIP-207ENST00000504884 HOXB7P09629 217 aa19.27■□□□□ 0.68
SNCAIP-207ENST00000504884 BECN1Q14457 450 aa19.27■□□□□ 0.68
SNCAIP-207ENST00000504884 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.68
SNCAIP-207ENST00000504884 FKBP5Q13451 457 aaPredicted RBP19.26■□□□□ 0.67
SNCAIP-207ENST00000504884 NPHP3Q7Z494 1330 aa19.26■□□□□ 0.67
SNCAIP-207ENST00000504884 ATP10DQ9P241 1426 aa19.26■□□□□ 0.67
SNCAIP-207ENST00000504884 EIF4A1P60842 406 aaKnown RBP19.26■□□□□ 0.67
SNCAIP-207ENST00000504884 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
SNCAIP-207ENST00000504884 ALS2Q96Q42 1657 aa19.26■□□□□ 0.67
SNCAIP-207ENST00000504884 HMMRO75330 724 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms