RNA–Protein interactions for RNA: ENST00000504666.5

SIL1-205, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 2

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-205ENST00000504666 COL18A1P39060 1754 aa18.49■□□□□ 0.55
SIL1-205ENST00000504666 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
SIL1-205ENST00000504666 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
SIL1-205ENST00000504666 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
SIL1-205ENST00000504666 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
SIL1-205ENST00000504666 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
SIL1-205ENST00000504666 CRB1P82279 1406 aa18.48■□□□□ 0.55
SIL1-205ENST00000504666 PARP4Q9UKK3 1724 aaKnown RBP18.47■□□□□ 0.55
SIL1-205ENST00000504666 TOM1L2Q6ZVM7 507 aa18.47■□□□□ 0.55
SIL1-205ENST00000504666 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
SIL1-205ENST00000504666 DISP2A7MBM2 1401 aa18.47■□□□□ 0.55
SIL1-205ENST00000504666 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
SIL1-205ENST00000504666 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
SIL1-205ENST00000504666 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
SIL1-205ENST00000504666 KDRP35968 1356 aa18.44■□□□□ 0.54
SIL1-205ENST00000504666 NEFMP07197 916 aa18.44■□□□□ 0.54
SIL1-205ENST00000504666 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
SIL1-205ENST00000504666 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
SIL1-205ENST00000504666 HMOX1P09601 288 aa18.43■□□□□ 0.54
SIL1-205ENST00000504666 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
SIL1-205ENST00000504666 RREB1Q92766 1687 aa18.42■□□□□ 0.54
SIL1-205ENST00000504666 RUNDC1Q96C34 613 aa18.42■□□□□ 0.54
SIL1-205ENST00000504666 NUP188Q5SRE5 1749 aa18.42■□□□□ 0.54
SIL1-205ENST00000504666 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
SIL1-205ENST00000504666 OVOS2A0A0G2JMS6 1433 aa18.41■□□□□ 0.54
SIL1-205ENST00000504666 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
SIL1-205ENST00000504666 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
SIL1-205ENST00000504666 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
SIL1-205ENST00000504666 DDB1Q16531 1140 aa18.4■□□□□ 0.54
SIL1-205ENST00000504666 USHBP1Q8N6Y0 703 aa18.4■□□□□ 0.54
SIL1-205ENST00000504666 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
SIL1-205ENST00000504666 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
SIL1-205ENST00000504666 PLEKHF1Q96S99 279 aa18.39■□□□□ 0.53
SIL1-205ENST00000504666 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.53
SIL1-205ENST00000504666 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
SIL1-205ENST00000504666 FAM208AQ9UK61 1670 aaKnown RBP18.38■□□□□ 0.53
SIL1-205ENST00000504666 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
SIL1-205ENST00000504666 IL2RBP14784 551 aa18.37■□□□□ 0.53
SIL1-205ENST00000504666 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
SIL1-205ENST00000504666 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
SIL1-205ENST00000504666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.37■□□□□ 0.53
SIL1-205ENST00000504666 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
SIL1-205ENST00000504666 CCDC146Q8IYE0 955 aa18.36■□□□□ 0.53
SIL1-205ENST00000504666 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
SIL1-205ENST00000504666 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
SIL1-205ENST00000504666 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
SIL1-205ENST00000504666 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
SIL1-205ENST00000504666 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
SIL1-205ENST00000504666 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
SIL1-205ENST00000504666 APAF1O14727 1248 aa18.32■□□□□ 0.52
SIL1-205ENST00000504666 TMPOP42166 694 aaKnown RBP18.31■□□□□ 0.52
SIL1-205ENST00000504666 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
SIL1-205ENST00000504666 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
SIL1-205ENST00000504666 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
SIL1-205ENST00000504666 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
SIL1-205ENST00000504666 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
SIL1-205ENST00000504666 PPP1R1BQ9UD71 204 aaPredicted RBP18.3■□□□□ 0.52
SIL1-205ENST00000504666 MEGF6O75095 1541 aa18.29■□□□□ 0.52
SIL1-205ENST00000504666 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
SIL1-205ENST00000504666 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
SIL1-205ENST00000504666 EXOC5O00471 708 aa18.28■□□□□ 0.52
SIL1-205ENST00000504666 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
SIL1-205ENST00000504666 RIPK4P57078 832 aa18.28■□□□□ 0.52
SIL1-205ENST00000504666 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
SIL1-205ENST00000504666 MARCH10Q8NA82 808 aaPredicted RBP18.28■□□□□ 0.52
SIL1-205ENST00000504666 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
SIL1-205ENST00000504666 TNS2Q63HR2 1409 aa18.28■□□□□ 0.52
SIL1-205ENST00000504666 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
SIL1-205ENST00000504666 C1orf141Q5JVX7 400 aa18.27■□□□□ 0.52
SIL1-205ENST00000504666 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
SIL1-205ENST00000504666 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
SIL1-205ENST00000504666 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
SIL1-205ENST00000504666 PTF1AQ7RTS3 328 aa18.26■□□□□ 0.51
SIL1-205ENST00000504666 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
SIL1-205ENST00000504666 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
SIL1-205ENST00000504666 NEUROD2Q15784 382 aa18.25■□□□□ 0.51
SIL1-205ENST00000504666 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
SIL1-205ENST00000504666 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
SIL1-205ENST00000504666 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
SIL1-205ENST00000504666 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
SIL1-205ENST00000504666 ACSBG1Q96GR2 724 aa18.24■□□□□ 0.51
SIL1-205ENST00000504666 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
SIL1-205ENST00000504666 PHKG2P15735 406 aa18.23■□□□□ 0.51
SIL1-205ENST00000504666 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
SIL1-205ENST00000504666 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
SIL1-205ENST00000504666 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
SIL1-205ENST00000504666 PLSCR1O15162 318 aa18.22■□□□□ 0.51
SIL1-205ENST00000504666 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
SIL1-205ENST00000504666 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
SIL1-205ENST00000504666 CYP27B1O15528 508 aa18.21■□□□□ 0.51
SIL1-205ENST00000504666 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
SIL1-205ENST00000504666 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
SIL1-205ENST00000504666 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
SIL1-205ENST00000504666 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
SIL1-205ENST00000504666 TRIM35Q9UPQ4 493 aa18.21■□□□□ 0.51
SIL1-205ENST00000504666 KCNQ2O43526 872 aa18.2■□□□□ 0.5
SIL1-205ENST00000504666 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
SIL1-205ENST00000504666 DCAF5Q96JK2 942 aa18.2■□□□□ 0.5
SIL1-205ENST00000504666 STK32BQ9NY57 414 aa18.2■□□□□ 0.5
SIL1-205ENST00000504666 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms