RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
UBE2B-204ENST00000504431 CCDC82Q8N4S0 544 aa11.91□□□□□ -0.5
UBE2B-204ENST00000504431 MPNDQ8N594 471 aa11.91□□□□□ -0.5
UBE2B-204ENST00000504431 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
UBE2B-204ENST00000504431 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
UBE2B-204ENST00000504431 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
UBE2B-204ENST00000504431 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
UBE2B-204ENST00000504431 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
UBE2B-204ENST00000504431 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
UBE2B-204ENST00000504431 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
UBE2B-204ENST00000504431 ABCC2Q92887 1545 aa11.88□□□□□ -0.51
UBE2B-204ENST00000504431 VASH1Q7L8A9 365 aaPredicted RBP11.88□□□□□ -0.51
UBE2B-204ENST00000504431 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
UBE2B-204ENST00000504431 MRGPRX2Q96LB1 330 aa11.88□□□□□ -0.51
UBE2B-204ENST00000504431 CDK15Q96Q40 435 aa11.87□□□□□ -0.51
UBE2B-204ENST00000504431 ABCA8O94911 1581 aa11.87□□□□□ -0.51
UBE2B-204ENST00000504431 RNF135Q8IUD6 432 aa11.86□□□□□ -0.51
UBE2B-204ENST00000504431 UHRF1BP1LA0JNW5 1464 aa11.85□□□□□ -0.51
UBE2B-204ENST00000504431 FOXC1Q12948 553 aa11.85□□□□□ -0.51
UBE2B-204ENST00000504431 ARID5BQ14865 1188 aa11.85□□□□□ -0.51
UBE2B-204ENST00000504431 KCTD15Q96SI1 283 aaPredicted RBP11.85□□□□□ -0.51
UBE2B-204ENST00000504431 ZCCHC11Q5TAX3 1644 aaKnown RBP11.85□□□□□ -0.51
UBE2B-204ENST00000504431 EFCAB5A4FU69 1503 aa11.85□□□□□ -0.51
UBE2B-204ENST00000504431 SIAH2O43255 324 aa11.84□□□□□ -0.51
UBE2B-204ENST00000504431 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
UBE2B-204ENST00000504431 PPP1R12CQ9BZL4 782 aa11.84□□□□□ -0.51
UBE2B-204ENST00000504431 CLIP1P30622 1438 aa11.84□□□□□ -0.51
UBE2B-204ENST00000504431 RAPGEF6Q8TEU7 1601 aa11.83□□□□□ -0.52
UBE2B-204ENST00000504431 ESPNB1AK53 854 aa11.83□□□□□ -0.52
UBE2B-204ENST00000504431 ADH1CP00326 375 aa11.83□□□□□ -0.52
UBE2B-204ENST00000504431 SNIP1Q8TAD8 396 aaKnown RBP11.83□□□□□ -0.52
UBE2B-204ENST00000504431 ARID3AQ99856 593 aa11.83□□□□□ -0.52
UBE2B-204ENST00000504431 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
UBE2B-204ENST00000504431 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
UBE2B-204ENST00000504431 KDM5BQ9UGL1 1544 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 KIF13AQ9H1H9 1805 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 ATP9BO43861 1147 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 LZTS3O60299 673 aaPredicted RBP11.82□□□□□ -0.52
UBE2B-204ENST00000504431 PRR20EP86478 221 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 PRR20CP86479 221 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 PRR20DP86480 221 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 PRR20BP86481 221 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 PRR20AP86496 221 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
UBE2B-204ENST00000504431 NR5A1Q13285 461 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 CYP4X1Q8N118 509 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 ASXL2Q76L83 1435 aa11.82□□□□□ -0.52
UBE2B-204ENST00000504431 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
UBE2B-204ENST00000504431 SKIP12755 728 aa11.81□□□□□ -0.52
UBE2B-204ENST00000504431 FSHRP23945 695 aa11.81□□□□□ -0.52
UBE2B-204ENST00000504431 ATP10BO94823 1461 aa11.81□□□□□ -0.52
UBE2B-204ENST00000504431 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
UBE2B-204ENST00000504431 TTC24A2A3L6 582 aaPredicted RBP11.8□□□□□ -0.52
UBE2B-204ENST00000504431 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
UBE2B-204ENST00000504431 GDF9O60383 454 aa11.8□□□□□ -0.52
UBE2B-204ENST00000504431 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
UBE2B-204ENST00000504431 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
UBE2B-204ENST00000504431 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
UBE2B-204ENST00000504431 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
UBE2B-204ENST00000504431 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
UBE2B-204ENST00000504431 PHTF2Q8N3S3 785 aa11.79□□□□□ -0.52
UBE2B-204ENST00000504431 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
UBE2B-204ENST00000504431 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
UBE2B-204ENST00000504431 DOLKQ9UPQ8 538 aa11.79□□□□□ -0.52
UBE2B-204ENST00000504431 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
UBE2B-204ENST00000504431 TBC1D9Q6ZT07 1266 aa11.78□□□□□ -0.52
UBE2B-204ENST00000504431 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
UBE2B-204ENST00000504431 ABCC10Q5T3U5 1492 aa11.77□□□□□ -0.52
UBE2B-204ENST00000504431 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
UBE2B-204ENST00000504431 DIP2BQ9P265 1576 aa11.77□□□□□ -0.53
UBE2B-204ENST00000504431 USP17L5A8MUK1 530 aa11.77□□□□□ -0.53
UBE2B-204ENST00000504431 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.53
UBE2B-204ENST00000504431 SIRT1Q96EB6 747 aa11.77□□□□□ -0.53
UBE2B-204ENST00000504431 MAFBQ9Y5Q3 323 aaPredicted RBP11.77□□□□□ -0.53
UBE2B-204ENST00000504431 TNFRSF10AO00220 468 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 GRM5P41594 1212 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 EML3Q32P44 896 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 CCDC116Q8IYX3 515 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 LRRIQ1Q96JM4 1722 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 FMN1Q68DA7 1419 aa11.76□□□□□ -0.53
UBE2B-204ENST00000504431 LMOD1P29536 600 aaPredicted RBP11.75□□□□□ -0.53
UBE2B-204ENST00000504431 RAB15P59190 212 aa11.75□□□□□ -0.53
UBE2B-204ENST00000504431 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
UBE2B-204ENST00000504431 PCDHB11Q9Y5F2 797 aa11.75□□□□□ -0.53
UBE2B-204ENST00000504431 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
UBE2B-204ENST00000504431 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
UBE2B-204ENST00000504431 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
UBE2B-204ENST00000504431 TOR4AQ9NXH8 423 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 PGPEP1Q9NXJ5 209 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 WDR7Q9Y4E6 1490 aa11.74□□□□□ -0.53
UBE2B-204ENST00000504431 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
UBE2B-204ENST00000504431 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
UBE2B-204ENST00000504431 EMILIN1Q9Y6C2 1016 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms