RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 DIP2CQ9Y2E4 1556 aa8.2□□□□□ -1.1
OTUD4-204ENST00000504331 JUNDP17535 347 aa8.2□□□□□ -1.1
OTUD4-204ENST00000504331 IRS1P35568 1242 aa8.2□□□□□ -1.1
OTUD4-204ENST00000504331 THEMISQ8N1K5 641 aaPredicted RBP8.2□□□□□ -1.1
OTUD4-204ENST00000504331 CNTNAP3BQ96NU0 1288 aa8.2□□□□□ -1.1
OTUD4-204ENST00000504331 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
OTUD4-204ENST00000504331 CNTNAP3Q9BZ76 1288 aa8.2□□□□□ -1.1
OTUD4-204ENST00000504331 GPR37O15354 613 aa8.19□□□□□ -1.1
OTUD4-204ENST00000504331 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
OTUD4-204ENST00000504331 ANKLE2Q86XL3 938 aa8.19□□□□□ -1.1
OTUD4-204ENST00000504331 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
OTUD4-204ENST00000504331 ZNF335Q9H4Z2 1342 aaPredicted RBP8.19□□□□□ -1.1
OTUD4-204ENST00000504331 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
OTUD4-204ENST00000504331 GNPATO15228 680 aa8.18□□□□□ -1.1
OTUD4-204ENST00000504331 CD46P15529 392 aa8.18□□□□□ -1.1
OTUD4-204ENST00000504331 SPAG9O60271 1321 aaKnown RBP8.18□□□□□ -1.1
OTUD4-204ENST00000504331 KIAA1107Q9UPP5 1409 aa8.18□□□□□ -1.1
OTUD4-204ENST00000504331 FAM135AQ9P2D6 1515 aa8.18□□□□□ -1.1
OTUD4-204ENST00000504331 ZNF142P52746 1687 aaPredicted RBP8.18□□□□□ -1.1
OTUD4-204ENST00000504331 MAN1A2O60476 641 aa8.17□□□□□ -1.1
OTUD4-204ENST00000504331 HSPA1LP34931 641 aa8.17□□□□□ -1.1
OTUD4-204ENST00000504331 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
OTUD4-204ENST00000504331 NUDT12Q9BQG2 462 aa8.17□□□□□ -1.1
OTUD4-204ENST00000504331 ATP1B4Q9UN42 357 aaPredicted RBP8.17□□□□□ -1.1
OTUD4-204ENST00000504331 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
OTUD4-204ENST00000504331 A2ML1A8K2U0 1454 aa8.16□□□□□ -1.1
OTUD4-204ENST00000504331 ADAM23O75077 832 aa8.16□□□□□ -1.1
OTUD4-204ENST00000504331 ADH1CP00326 375 aa8.16□□□□□ -1.1
OTUD4-204ENST00000504331 MED1Q15648 1581 aaPredicted RBP8.16□□□□□ -1.1
OTUD4-204ENST00000504331 CCDC18Q5T9S5 1454 aa8.16□□□□□ -1.1
OTUD4-204ENST00000504331 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
OTUD4-204ENST00000504331 SUPT6HQ7KZ85 1726 aaKnown RBP8.15□□□□□ -1.1
OTUD4-204ENST00000504331 CDK13Q14004 1512 aaKnown RBP8.15□□□□□ -1.1
OTUD4-204ENST00000504331 SHANK2Q9UPX8 1470 aa8.15□□□□□ -1.1
OTUD4-204ENST00000504331 KDM4AO75164 1064 aa8.15□□□□□ -1.1
OTUD4-204ENST00000504331 FOXK2Q01167 660 aa8.15□□□□□ -1.1
OTUD4-204ENST00000504331 SYMPKQ92797 1274 aaKnown RBP8.15□□□□□ -1.1
OTUD4-204ENST00000504331 CEP170BQ9Y4F5 1589 aaPredicted RBP8.14□□□□□ -1.11
OTUD4-204ENST00000504331 SEMA3EO15041 775 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 UBTFP17480 764 aaKnown RBP8.14□□□□□ -1.11
OTUD4-204ENST00000504331 RANGAP1P46060 587 aaPredicted RBP8.14□□□□□ -1.11
OTUD4-204ENST00000504331 HAP1P54257 671 aaPredicted RBP8.14□□□□□ -1.11
OTUD4-204ENST00000504331 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 MPNDQ8N594 471 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 KIDINS220Q9ULH0 1771 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 ABCA6Q8N139 1617 aa8.14□□□□□ -1.11
OTUD4-204ENST00000504331 ABCC1P33527 1531 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 CDC42BPBQ9Y5S2 1711 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 ARHGEF15O94989 841 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 C6orf118Q5T5N4 469 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
OTUD4-204ENST00000504331 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
OTUD4-204ENST00000504331 ERICH6Q7L0X2 663 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.13□□□□□ -1.11
OTUD4-204ENST00000504331 MED14O60244 1454 aa8.13□□□□□ -1.11
OTUD4-204ENST00000504331 RTEL1-TNFRSF6BF6WH68 1400 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 PREX2Q70Z35 1606 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 HOXA2O43364 376 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 GGT6Q6P531 493 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 COL25A1Q9BXS0 654 aaPredicted RBP8.12□□□□□ -1.11
OTUD4-204ENST00000504331 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 DNMT3LQ9UJW3 386 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 A2MP01023 1474 aa8.12□□□□□ -1.11
OTUD4-204ENST00000504331 ITSN2Q9NZM3 1697 aa8.11□□□□□ -1.11
OTUD4-204ENST00000504331 KANK3Q6NY19 840 aa8.11□□□□□ -1.11
OTUD4-204ENST00000504331 PSMG3-AS1Q96PY0 264 aa8.11□□□□□ -1.11
OTUD4-204ENST00000504331 NLRP1Q9C000 1473 aa8.11□□□□□ -1.11
OTUD4-204ENST00000504331 SAMD9LQ8IVG5 1584 aa8.1□□□□□ -1.11
OTUD4-204ENST00000504331 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
OTUD4-204ENST00000504331 CFDP1Q9UEE9 299 aaPredicted RBP8.1□□□□□ -1.11
OTUD4-204ENST00000504331 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
OTUD4-204ENST00000504331 DNMT1P26358 1616 aaKnown RBP8.1□□□□□ -1.11
OTUD4-204ENST00000504331 MYO3AQ8NEV4 1616 aa8.1□□□□□ -1.11
OTUD4-204ENST00000504331 TNRQ92752 1358 aa8.1□□□□□ -1.11
OTUD4-204ENST00000504331 USP46P62068 366 aa8.09□□□□□ -1.11
OTUD4-204ENST00000504331 BAP1Q92560 729 aa8.09□□□□□ -1.11
OTUD4-204ENST00000504331 CASKIN1Q8WXD9 1431 aa8.09□□□□□ -1.11
OTUD4-204ENST00000504331 DHX29Q7Z478 1369 aaKnown RBP8.09□□□□□ -1.12
OTUD4-204ENST00000504331 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
OTUD4-204ENST00000504331 ZIC2O95409 532 aaPredicted RBP8.08□□□□□ -1.12
OTUD4-204ENST00000504331 ITGB2P05107 769 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 CCNYL3P0C7X3 344 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 SLURP2P0DP57 97 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 VARSP26640 1264 aaKnown RBP8.08□□□□□ -1.12
OTUD4-204ENST00000504331 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 MIA2Q96PC5 1412 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 PLXNC1O60486 1568 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 POLR1AO95602 1720 aaPredicted RBP8.08□□□□□ -1.12
OTUD4-204ENST00000504331 ATP7AQ04656 1500 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 ADGBQ8N7X0 1667 aa8.08□□□□□ -1.12
OTUD4-204ENST00000504331 ARHGAP35Q9NRY4 1499 aa8.07□□□□□ -1.12
OTUD4-204ENST00000504331 WASHC2CQ9Y4E1 1318 aa8.07□□□□□ -1.12
OTUD4-204ENST00000504331 NPHP4O75161 1426 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms