RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
SSBP2-202ENST00000504136 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
SSBP2-202ENST00000504136 FOXK1P85037 733 aa12.66□□□□□ -0.38
SSBP2-202ENST00000504136 ATAD2Q6PL18 1390 aa12.66□□□□□ -0.38
SSBP2-202ENST00000504136 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
SSBP2-202ENST00000504136 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 ST18O60284 1047 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 SLIT3O75094 1523 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 CPDO75976 1380 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 MON2Q7Z3U7 1717 aa12.65□□□□□ -0.38
SSBP2-202ENST00000504136 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
SSBP2-202ENST00000504136 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
SSBP2-202ENST00000504136 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
SSBP2-202ENST00000504136 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
SSBP2-202ENST00000504136 CLSPNQ9HAW4 1339 aa12.63□□□□□ -0.39
SSBP2-202ENST00000504136 PDE4AP27815 886 aa12.63□□□□□ -0.39
SSBP2-202ENST00000504136 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
SSBP2-202ENST00000504136 DSG2Q14126 1118 aa12.63□□□□□ -0.39
SSBP2-202ENST00000504136 MFSD10Q14728 455 aa12.63□□□□□ -0.39
SSBP2-202ENST00000504136 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
SSBP2-202ENST00000504136 EP400Q96L91 3159 aa12.61□□□□□ -0.39
SSBP2-202ENST00000504136 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
SSBP2-202ENST00000504136 SNPHO15079 494 aa12.61□□□□□ -0.39
SSBP2-202ENST00000504136 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
SSBP2-202ENST00000504136 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
SSBP2-202ENST00000504136 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
SSBP2-202ENST00000504136 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
SSBP2-202ENST00000504136 BTG4Q9NY30 223 aa12.6□□□□□ -0.39
SSBP2-202ENST00000504136 SPATA31A5Q5VU36 1347 aa12.6□□□□□ -0.39
SSBP2-202ENST00000504136 SPATA31A7Q8IWB4 1347 aa12.6□□□□□ -0.39
SSBP2-202ENST00000504136 COL18A1P39060 1754 aa12.59□□□□□ -0.39
SSBP2-202ENST00000504136 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
SSBP2-202ENST00000504136 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
SSBP2-202ENST00000504136 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
SSBP2-202ENST00000504136 ABCC6O95255 1503 aa12.58□□□□□ -0.4
SSBP2-202ENST00000504136 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
SSBP2-202ENST00000504136 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
SSBP2-202ENST00000504136 ABTB2Q8N961 1025 aa12.58□□□□□ -0.4
SSBP2-202ENST00000504136 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
SSBP2-202ENST00000504136 TTC21AQ8NDW8 1320 aa12.58□□□□□ -0.4
SSBP2-202ENST00000504136 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
SSBP2-202ENST00000504136 CCDC125Q86Z20 511 aa12.57□□□□□ -0.4
SSBP2-202ENST00000504136 TESK2Q96S53 571 aa12.57□□□□□ -0.4
SSBP2-202ENST00000504136 NFAT5O94916 1531 aa12.57□□□□□ -0.4
SSBP2-202ENST00000504136 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 GCP02774 474 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
SSBP2-202ENST00000504136 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
SSBP2-202ENST00000504136 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 TTC21BQ7Z4L5 1316 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
SSBP2-202ENST00000504136 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
SSBP2-202ENST00000504136 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
SSBP2-202ENST00000504136 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
SSBP2-202ENST00000504136 SLC34A2O95436 690 aa12.54□□□□□ -0.4
SSBP2-202ENST00000504136 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
SSBP2-202ENST00000504136 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
SSBP2-202ENST00000504136 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
SSBP2-202ENST00000504136 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
SSBP2-202ENST00000504136 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
SSBP2-202ENST00000504136 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
SSBP2-202ENST00000504136 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
SSBP2-202ENST00000504136 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
SSBP2-202ENST00000504136 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
SSBP2-202ENST00000504136 KRT27Q7Z3Y8 459 aa12.52□□□□□ -0.41
SSBP2-202ENST00000504136 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
SSBP2-202ENST00000504136 ST20-MTHFSA0A0A6YYL1 179 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
SSBP2-202ENST00000504136 ARHGEF25Q86VW2 580 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
SSBP2-202ENST00000504136 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
SSBP2-202ENST00000504136 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 USP47Q96K76 1375 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 DISP2A7MBM2 1401 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 CRB1P82279 1406 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
SSBP2-202ENST00000504136 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
SSBP2-202ENST00000504136 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
SSBP2-202ENST00000504136 RGPD5Q99666 1765 aa12.5□□□□□ -0.41
SSBP2-202ENST00000504136 GPR153Q6NV75 609 aa12.49□□□□□ -0.41
SSBP2-202ENST00000504136 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
SSBP2-202ENST00000504136 MYOM1P52179 1685 aa12.48□□□□□ -0.41
SSBP2-202ENST00000504136 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
SSBP2-202ENST00000504136 LARP1Q6PKG0 1096 aaKnown RBP12.48□□□□□ -0.41
SSBP2-202ENST00000504136 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
SSBP2-202ENST00000504136 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
SSBP2-202ENST00000504136 LTN1O94822 1766 aa12.48□□□□□ -0.41
SSBP2-202ENST00000504136 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
SSBP2-202ENST00000504136 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
SSBP2-202ENST00000504136 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
SSBP2-202ENST00000504136 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
SSBP2-202ENST00000504136 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
SSBP2-202ENST00000504136 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
SSBP2-202ENST00000504136 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
SSBP2-202ENST00000504136 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms