RNA–Protein interactions for RNA: ENST00000504121.5

SLC1A3-205, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-205ENST00000504121 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
SLC1A3-205ENST00000504121 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
SLC1A3-205ENST00000504121 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
SLC1A3-205ENST00000504121 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
SLC1A3-205ENST00000504121 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
SLC1A3-205ENST00000504121 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
SLC1A3-205ENST00000504121 QSER1Q2KHR3 1735 aa13.59□□□□□ -0.23
SLC1A3-205ENST00000504121 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 MSH5O43196 834 aa13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
SLC1A3-205ENST00000504121 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 NME9Q86XW9 330 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 COG3Q96JB2 828 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 LTN1O94822 1766 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 ANKRD36BQ8N2N9 1353 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
SLC1A3-205ENST00000504121 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
SLC1A3-205ENST00000504121 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
SLC1A3-205ENST00000504121 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
SLC1A3-205ENST00000504121 TESK2Q96S53 571 aa13.56□□□□□ -0.24
SLC1A3-205ENST00000504121 NSD2O96028 1365 aa13.56□□□□□ -0.24
SLC1A3-205ENST00000504121 CHD4Q14839 1912 aa13.55□□□□□ -0.24
SLC1A3-205ENST00000504121 FHDC1Q9C0D6 1143 aaPredicted RBP13.55□□□□□ -0.24
SLC1A3-205ENST00000504121 POLD1P28340 1107 aa13.54□□□□□ -0.24
SLC1A3-205ENST00000504121 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
SLC1A3-205ENST00000504121 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
SLC1A3-205ENST00000504121 BTAF1O14981 1849 aa13.53□□□□□ -0.24
SLC1A3-205ENST00000504121 SOX12O15370 315 aa13.53□□□□□ -0.24
SLC1A3-205ENST00000504121 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
SLC1A3-205ENST00000504121 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
SLC1A3-205ENST00000504121 HOXC9P31274 260 aa13.52□□□□□ -0.25
SLC1A3-205ENST00000504121 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
SLC1A3-205ENST00000504121 LRRC4BQ9NT99 713 aa13.52□□□□□ -0.25
SLC1A3-205ENST00000504121 MYOM1P52179 1685 aa13.52□□□□□ -0.25
SLC1A3-205ENST00000504121 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
SLC1A3-205ENST00000504121 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
SLC1A3-205ENST00000504121 AMPHP49418 695 aa13.51□□□□□ -0.25
SLC1A3-205ENST00000504121 TMF1P82094 1093 aa13.51□□□□□ -0.25
SLC1A3-205ENST00000504121 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
SLC1A3-205ENST00000504121 INSRP06213 1382 aa13.5□□□□□ -0.25
SLC1A3-205ENST00000504121 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
SLC1A3-205ENST00000504121 ACSBG1Q96GR2 724 aa13.5□□□□□ -0.25
SLC1A3-205ENST00000504121 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
SLC1A3-205ENST00000504121 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
SLC1A3-205ENST00000504121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC1A3-205ENST00000504121 LY75O60449 1722 aa13.49□□□□□ -0.25
SLC1A3-205ENST00000504121 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 USP47Q96K76 1375 aa13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 FYB1O15117 783 aa13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 RAPGEF4Q8WZA2 1011 aa13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
SLC1A3-205ENST00000504121 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
SLC1A3-205ENST00000504121 PCDH11XQ9BZA7 1347 aa13.47□□□□□ -0.25
SLC1A3-205ENST00000504121 PCDH11YQ9BZA8 1340 aa13.47□□□□□ -0.25
SLC1A3-205ENST00000504121 ZNF827Q17R98 1081 aa13.47□□□□□ -0.25
SLC1A3-205ENST00000504121 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
SLC1A3-205ENST00000504121 FLT4P35916 1363 aa13.46□□□□□ -0.25
SLC1A3-205ENST00000504121 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
SLC1A3-205ENST00000504121 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
SLC1A3-205ENST00000504121 TATP17735 454 aaPredicted RBP13.45□□□□□ -0.26
SLC1A3-205ENST00000504121 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
SLC1A3-205ENST00000504121 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
SLC1A3-205ENST00000504121 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
SLC1A3-205ENST00000504121 GPR162Q16538 588 aa13.44□□□□□ -0.26
SLC1A3-205ENST00000504121 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
SLC1A3-205ENST00000504121 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
SLC1A3-205ENST00000504121 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
SLC1A3-205ENST00000504121 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
SLC1A3-205ENST00000504121 MEGF6O75095 1541 aa13.42□□□□□ -0.26
SLC1A3-205ENST00000504121 UTRNP46939 3433 aa13.42□□□□□ -0.26
SLC1A3-205ENST00000504121 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
SLC1A3-205ENST00000504121 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
SLC1A3-205ENST00000504121 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
SLC1A3-205ENST00000504121 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
SLC1A3-205ENST00000504121 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
SLC1A3-205ENST00000504121 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
SLC1A3-205ENST00000504121 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
SLC1A3-205ENST00000504121 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
SLC1A3-205ENST00000504121 SSFA2P28290 1259 aa13.38□□□□□ -0.27
SLC1A3-205ENST00000504121 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
SLC1A3-205ENST00000504121 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
SLC1A3-205ENST00000504121 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
SLC1A3-205ENST00000504121 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
SLC1A3-205ENST00000504121 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
SLC1A3-205ENST00000504121 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
SLC1A3-205ENST00000504121 CYP27B1O15528 508 aa13.36□□□□□ -0.27
SLC1A3-205ENST00000504121 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
SLC1A3-205ENST00000504121 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
SLC1A3-205ENST00000504121 C5P01031 1676 aa13.35□□□□□ -0.27
SLC1A3-205ENST00000504121 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
SLC1A3-205ENST00000504121 ANKRD26Q9UPS8 1709 aa13.35□□□□□ -0.27
SLC1A3-205ENST00000504121 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms