RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 AEBP1Q8IUX7 1158 aa14.91□□□□□ -0.02
VCAN-205ENST00000503923 ZCRB1Q8TBF4 217 aaKnown RBP14.91□□□□□ -0.02
VCAN-205ENST00000503923 FAM196AQ6ZSG2 479 aa14.9□□□□□ -0.02
VCAN-205ENST00000503923 MARCH10Q8NA82 808 aaPredicted RBP14.9□□□□□ -0.02
VCAN-205ENST00000503923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.02
VCAN-205ENST00000503923 HMOX1P09601 288 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 SPG7Q9UQ90 795 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 PCDH11XQ9BZA7 1347 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 PCDH11YQ9BZA8 1340 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
VCAN-205ENST00000503923 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
VCAN-205ENST00000503923 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCAN-205ENST00000503923 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
VCAN-205ENST00000503923 BCL9O00512 1426 aa14.87□□□□□ -0.03
VCAN-205ENST00000503923 SOCS7O14512 581 aa14.87□□□□□ -0.03
VCAN-205ENST00000503923 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
VCAN-205ENST00000503923 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
VCAN-205ENST00000503923 EP400Q96L91 3159 aa14.87□□□□□ -0.03
VCAN-205ENST00000503923 FCHSD2O94868 740 aa14.85□□□□□ -0.03
VCAN-205ENST00000503923 CCDC125Q86Z20 511 aa14.85□□□□□ -0.03
VCAN-205ENST00000503923 UPF1Q92900 1129 aaKnown RBP eCLIP14.85□□□□□ -0.03
VCAN-205ENST00000503923 CYP27B1O15528 508 aa14.84□□□□□ -0.03
VCAN-205ENST00000503923 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
VCAN-205ENST00000503923 RSPH6AQ9H0K4 717 aa14.84□□□□□ -0.03
VCAN-205ENST00000503923 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
VCAN-205ENST00000503923 SBF2Q86WG5 1849 aa14.82□□□□□ -0.04
VCAN-205ENST00000503923 TRIM37O94972 964 aa14.82□□□□□ -0.04
VCAN-205ENST00000503923 PHKG2P15735 406 aa14.82□□□□□ -0.04
VCAN-205ENST00000503923 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
VCAN-205ENST00000503923 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
VCAN-205ENST00000503923 ZNF530Q6P9A1 599 aaPredicted RBP14.82□□□□□ -0.04
VCAN-205ENST00000503923 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
VCAN-205ENST00000503923 HSP90AB1P08238 724 aaKnown RBP14.81□□□□□ -0.04
VCAN-205ENST00000503923 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
VCAN-205ENST00000503923 C1orf141Q5JVX7 400 aa14.81□□□□□ -0.04
VCAN-205ENST00000503923 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
VCAN-205ENST00000503923 KAT6BQ8WYB5 2073 aa14.8□□□□□ -0.04
VCAN-205ENST00000503923 NEFMP07197 916 aa14.8□□□□□ -0.04
VCAN-205ENST00000503923 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
VCAN-205ENST00000503923 GAS2L2Q8NHY3 880 aa14.8□□□□□ -0.04
VCAN-205ENST00000503923 ACSBG1Q96GR2 724 aa14.8□□□□□ -0.04
VCAN-205ENST00000503923 BCL11BQ9C0K0 894 aaPredicted RBP14.8□□□□□ -0.04
VCAN-205ENST00000503923 MRS2Q9HD23 443 aa14.8□□□□□ -0.04
VCAN-205ENST00000503923 NHSQ6T4R5 1651 aa14.8□□□□□ -0.04
VCAN-205ENST00000503923 CCDC184Q52MB2 194 aa14.79□□□□□ -0.04
VCAN-205ENST00000503923 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
VCAN-205ENST00000503923 DOT1LQ8TEK3 1739 aa14.79□□□□□ -0.04
VCAN-205ENST00000503923 TNS1Q9HBL0 1735 aaKnown RBP14.78□□□□□ -0.04
VCAN-205ENST00000503923 PHACTR3Q96KR7 559 aa14.78□□□□□ -0.04
VCAN-205ENST00000503923 MAPK8IP3Q9UPT6 1336 aa14.77□□□□□ -0.04
VCAN-205ENST00000503923 KCNQ2O43526 872 aa14.77□□□□□ -0.05
VCAN-205ENST00000503923 BAG6P46379 1132 aa14.77□□□□□ -0.05
VCAN-205ENST00000503923 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
VCAN-205ENST00000503923 SYTL4Q96C24 671 aaPredicted RBP14.77□□□□□ -0.05
VCAN-205ENST00000503923 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
VCAN-205ENST00000503923 PLEKHF1Q96S99 279 aa14.77□□□□□ -0.05
VCAN-205ENST00000503923 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.05
VCAN-205ENST00000503923 APBA3O96018 575 aa14.76□□□□□ -0.05
VCAN-205ENST00000503923 TOGARAM1Q9Y4F4 1720 aa14.75□□□□□ -0.05
VCAN-205ENST00000503923 PTF1AQ7RTS3 328 aa14.75□□□□□ -0.05
VCAN-205ENST00000503923 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
VCAN-205ENST00000503923 MAP3K5Q99683 1374 aa14.74□□□□□ -0.05
VCAN-205ENST00000503923 ITGB4P16144 1822 aa14.74□□□□□ -0.05
VCAN-205ENST00000503923 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
VCAN-205ENST00000503923 ERVV-2B6SEH9 535 aa14.74□□□□□ -0.05
VCAN-205ENST00000503923 MPRIPQ6WCQ1 1025 aa14.74□□□□□ -0.05
VCAN-205ENST00000503923 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
VCAN-205ENST00000503923 BTAF1O14981 1849 aa14.73□□□□□ -0.05
VCAN-205ENST00000503923 SCN11AQ9UI33 1791 aa14.73□□□□□ -0.05
VCAN-205ENST00000503923 PLSCR1O15162 318 aa14.73□□□□□ -0.05
VCAN-205ENST00000503923 DEFB132Q7Z7B7 95 aa14.73□□□□□ -0.05
VCAN-205ENST00000503923 RUNDC1Q96C34 613 aa14.73□□□□□ -0.05
VCAN-205ENST00000503923 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
VCAN-205ENST00000503923 VIRMAQ69YN4 1812 aaKnown RBP14.72□□□□□ -0.05
VCAN-205ENST00000503923 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
VCAN-205ENST00000503923 RNMTO43148 476 aaKnown RBP14.72□□□□□ -0.05
VCAN-205ENST00000503923 EN1Q05925 392 aaPredicted RBP14.72□□□□□ -0.05
VCAN-205ENST00000503923 NFE2L2Q16236 605 aa14.72□□□□□ -0.05
VCAN-205ENST00000503923 CCDC146Q8IYE0 955 aa14.72□□□□□ -0.05
VCAN-205ENST00000503923 RGPD3A6NKT7 1758 aaPredicted RBP14.72□□□□□ -0.05
VCAN-205ENST00000503923 RGPD4Q7Z3J3 1758 aa14.72□□□□□ -0.05
VCAN-205ENST00000503923 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.05
VCAN-205ENST00000503923 HTATSF1O43719 755 aaKnown RBP14.71□□□□□ -0.05
VCAN-205ENST00000503923 CABP4P57796 275 aa14.71□□□□□ -0.05
VCAN-205ENST00000503923 RTF1Q92541 710 aaKnown RBP14.71□□□□□ -0.05
VCAN-205ENST00000503923 LGR6Q9HBX8 967 aa14.71□□□□□ -0.05
VCAN-205ENST00000503923 PIGBQ92521 554 aa14.7□□□□□ -0.06
VCAN-205ENST00000503923 CAMKK2Q96RR4 588 aa14.7□□□□□ -0.06
VCAN-205ENST00000503923 DLG5Q8TDM6 1919 aa14.69□□□□□ -0.06
VCAN-205ENST00000503923 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
VCAN-205ENST00000503923 EZH2Q15910 746 aaKnown RBP14.69□□□□□ -0.06
VCAN-205ENST00000503923 IL17REQ8NFR9 667 aa14.69□□□□□ -0.06
VCAN-205ENST00000503923 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
VCAN-205ENST00000503923 MRC1P22897 1456 aa14.69□□□□□ -0.06
VCAN-205ENST00000503923 MIER1Q8N108 512 aa14.68□□□□□ -0.06
VCAN-205ENST00000503923 NFATC2IPQ8NCF5 419 aa14.68□□□□□ -0.06
VCAN-205ENST00000503923 SMARCC1Q92922 1105 aaPredicted RBP14.68□□□□□ -0.06
VCAN-205ENST00000503923 CEMIPQ8WUJ3 1361 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms