RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 XIRP1Q702N8 1843 aaKnown RBP10.43□□□□□ -0.74
PTCD2-206ENST00000503315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.42□□□□□ -0.74
PTCD2-206ENST00000503315 TMEM88BA6NKF7 163 aa10.42□□□□□ -0.74
PTCD2-206ENST00000503315 SOX11P35716 441 aa10.42□□□□□ -0.74
PTCD2-206ENST00000503315 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
PTCD2-206ENST00000503315 NOS1P29475 1434 aa10.42□□□□□ -0.74
PTCD2-206ENST00000503315 SYNMO15061 1565 aa10.42□□□□□ -0.74
PTCD2-206ENST00000503315 EFCAB6Q5THR3 1501 aa10.42□□□□□ -0.74
PTCD2-206ENST00000503315 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
PTCD2-206ENST00000503315 VAC14Q08AM6 782 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 ILDR2Q71H61 639 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 PCDHGA10Q9Y5H3 936 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 LRRC7Q96NW7 1537 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 TMEM2Q9UHN6 1383 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 PRPF38BQ5VTL8 546 aaKnown RBP10.41□□□□□ -0.74
PTCD2-206ENST00000503315 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
PTCD2-206ENST00000503315 TET3O43151 1660 aa10.4□□□□□ -0.74
PTCD2-206ENST00000503315 GCC2Q8IWJ2 1684 aa10.4□□□□□ -0.74
PTCD2-206ENST00000503315 CD46P15529 392 aa10.4□□□□□ -0.75
PTCD2-206ENST00000503315 PIP4K2BP78356 416 aa10.4□□□□□ -0.75
PTCD2-206ENST00000503315 CDCA8Q53HL2 280 aa10.4□□□□□ -0.75
PTCD2-206ENST00000503315 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.75
PTCD2-206ENST00000503315 GJD4Q96KN9 370 aaPredicted RBP10.4□□□□□ -0.75
PTCD2-206ENST00000503315 SLC52A1Q9NWF4 448 aa10.4□□□□□ -0.75
PTCD2-206ENST00000503315 RPRD2Q5VT52 1461 aaKnown RBP10.39□□□□□ -0.75
PTCD2-206ENST00000503315 MRRFQ96E11 262 aaKnown RBP10.39□□□□□ -0.75
PTCD2-206ENST00000503315 ALG2Q9H553 416 aa10.39□□□□□ -0.75
PTCD2-206ENST00000503315 E9PCH4 1651 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 UNC13BO14795 1591 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 HSPA1LP34931 641 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 SEMA3FQ13275 785 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
PTCD2-206ENST00000503315 IGSF5Q9NSI5 407 aa10.37□□□□□ -0.75
PTCD2-206ENST00000503315 ADGRB3O60242 1522 aa10.37□□□□□ -0.75
PTCD2-206ENST00000503315 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
PTCD2-206ENST00000503315 PLCG2P16885 1265 aa10.36□□□□□ -0.75
PTCD2-206ENST00000503315 NDUFV2P19404 249 aa10.36□□□□□ -0.75
PTCD2-206ENST00000503315 ATN1P54259 1190 aaPredicted RBP10.36□□□□□ -0.75
PTCD2-206ENST00000503315 PPARGC1BQ86YN6 1023 aaKnown RBP10.36□□□□□ -0.75
PTCD2-206ENST00000503315 FAM177A1Q8N128 213 aaPredicted RBP10.36□□□□□ -0.75
PTCD2-206ENST00000503315 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
PTCD2-206ENST00000503315 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
PTCD2-206ENST00000503315 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
PTCD2-206ENST00000503315 HELBQ8NG08 1087 aaPredicted RBP10.35□□□□□ -0.75
PTCD2-206ENST00000503315 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
PTCD2-206ENST00000503315 MAFBQ9Y5Q3 323 aaPredicted RBP10.35□□□□□ -0.75
PTCD2-206ENST00000503315 CHD2O14647 1828 aaKnown RBP10.35□□□□□ -0.75
PTCD2-206ENST00000503315 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
PTCD2-206ENST00000503315 SLC34A2O95436 690 aa10.34□□□□□ -0.75
PTCD2-206ENST00000503315 IER5LQ5T953 404 aa10.34□□□□□ -0.75
PTCD2-206ENST00000503315 TMEM92Q6UXU6 159 aa10.34□□□□□ -0.75
PTCD2-206ENST00000503315 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
PTCD2-206ENST00000503315 SLC26A8Q96RN1 970 aa10.34□□□□□ -0.75
PTCD2-206ENST00000503315 KCNA6P17658 529 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 CANXP27824 592 aaKnown RBP10.33□□□□□ -0.76
PTCD2-206ENST00000503315 TTC13Q8NBP0 860 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 UCN2Q96RP3 112 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 ITGAEP38570 1179 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 C6orf132Q5T0Z8 1188 aa10.33□□□□□ -0.76
PTCD2-206ENST00000503315 ARID4AP29374 1257 aaPredicted RBP10.32□□□□□ -0.76
PTCD2-206ENST00000503315 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
PTCD2-206ENST00000503315 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
PTCD2-206ENST00000503315 BCL2L13Q9BXK5 485 aa10.32□□□□□ -0.76
PTCD2-206ENST00000503315 NUP155O75694 1391 aa10.31□□□□□ -0.76
PTCD2-206ENST00000503315 PRSS12P56730 875 aa10.31□□□□□ -0.76
PTCD2-206ENST00000503315 ELOAQ14241 798 aaKnown RBP10.31□□□□□ -0.76
PTCD2-206ENST00000503315 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
PTCD2-206ENST00000503315 PLEKHG1Q9ULL1 1385 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 RIMS2Q9UQ26 1411 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 NWD1Q149M9 1564 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 ATP9BO43861 1147 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 SPHKAPQ2M3C7 1700 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 TMEM94Q12767 1356 aa10.3□□□□□ -0.76
PTCD2-206ENST00000503315 RRBP1Q9P2E9 1410 aaKnown RBP10.3□□□□□ -0.76
PTCD2-206ENST00000503315 POTEFA5A3E0 1075 aa10.29□□□□□ -0.76
PTCD2-206ENST00000503315 TCF3P15923 654 aa10.29□□□□□ -0.76
PTCD2-206ENST00000503315 TSC1Q92574 1164 aa10.29□□□□□ -0.76
PTCD2-206ENST00000503315 TRIM34Q9BYJ4 488 aa10.29□□□□□ -0.76
PTCD2-206ENST00000503315 HMX1Q9NP08 348 aaPredicted RBP10.29□□□□□ -0.76
PTCD2-206ENST00000503315 KIAA1522Q9P206 1035 aaPredicted RBP10.29□□□□□ -0.76
PTCD2-206ENST00000503315 TBX22Q9Y458 520 aa10.29□□□□□ -0.76
PTCD2-206ENST00000503315 USP46P62068 366 aa10.28□□□□□ -0.76
PTCD2-206ENST00000503315 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTCD2-206ENST00000503315 CCDC125Q86Z20 511 aa10.28□□□□□ -0.76
PTCD2-206ENST00000503315 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTCD2-206ENST00000503315 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
PTCD2-206ENST00000503315 DRC1Q96MC2 740 aa10.28□□□□□ -0.76
PTCD2-206ENST00000503315 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
PTCD2-206ENST00000503315 FAM135BQ49AJ0 1406 aa10.28□□□□□ -0.76
PTCD2-206ENST00000503315 KDM4AO75164 1064 aa10.27□□□□□ -0.77
PTCD2-206ENST00000503315 ZNF16P17020 682 aaPredicted RBP10.27□□□□□ -0.77
PTCD2-206ENST00000503315 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
PTCD2-206ENST00000503315 TBC1D9Q6ZT07 1266 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms