RNA–Protein interactions for RNA: ENST00000502825.1

TMEM173-203, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-203ENST00000502825 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
TMEM173-203ENST00000502825 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
TMEM173-203ENST00000502825 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
TMEM173-203ENST00000502825 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
TMEM173-203ENST00000502825 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
TMEM173-203ENST00000502825 ZCRB1Q8TBF4 217 aaKnown RBP16.28■□□□□ 0.2
TMEM173-203ENST00000502825 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
TMEM173-203ENST00000502825 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
TMEM173-203ENST00000502825 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
TMEM173-203ENST00000502825 BTAF1O14981 1849 aa16.28■□□□□ 0.2
TMEM173-203ENST00000502825 PAPPAQ13219 1627 aa16.27■□□□□ 0.2
TMEM173-203ENST00000502825 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
TMEM173-203ENST00000502825 FHDC1Q9C0D6 1143 aaPredicted RBP16.27■□□□□ 0.2
TMEM173-203ENST00000502825 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
TMEM173-203ENST00000502825 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
TMEM173-203ENST00000502825 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
TMEM173-203ENST00000502825 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
TMEM173-203ENST00000502825 SMG6Q86US8 1419 aaKnown RBP16.26■□□□□ 0.19
TMEM173-203ENST00000502825 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
TMEM173-203ENST00000502825 RTL1A6NKG5 1358 aa16.25■□□□□ 0.19
TMEM173-203ENST00000502825 FLT4P35916 1363 aa16.25■□□□□ 0.19
TMEM173-203ENST00000502825 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
TMEM173-203ENST00000502825 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
TMEM173-203ENST00000502825 INSRP06213 1382 aa16.24■□□□□ 0.19
TMEM173-203ENST00000502825 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
TMEM173-203ENST00000502825 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
TMEM173-203ENST00000502825 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
TMEM173-203ENST00000502825 ARXQ96QS3 562 aa16.22■□□□□ 0.19
TMEM173-203ENST00000502825 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
TMEM173-203ENST00000502825 ZNF784Q8NCA9 323 aaPredicted RBP16.21■□□□□ 0.19
TMEM173-203ENST00000502825 CHD4Q14839 1912 aa16.21■□□□□ 0.19
TMEM173-203ENST00000502825 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
TMEM173-203ENST00000502825 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
TMEM173-203ENST00000502825 RGPD2P0DJD1 1756 aa16.19■□□□□ 0.18
TMEM173-203ENST00000502825 EYA1Q99502 592 aa16.19■□□□□ 0.18
TMEM173-203ENST00000502825 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
TMEM173-203ENST00000502825 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
TMEM173-203ENST00000502825 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
TMEM173-203ENST00000502825 MAP3K5Q99683 1374 aa16.18■□□□□ 0.18
TMEM173-203ENST00000502825 FAM208AQ9UK61 1670 aaKnown RBP16.18■□□□□ 0.18
TMEM173-203ENST00000502825 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
TMEM173-203ENST00000502825 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
TMEM173-203ENST00000502825 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
TMEM173-203ENST00000502825 KCNQ4P56696 695 aa16.16■□□□□ 0.18
TMEM173-203ENST00000502825 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
TMEM173-203ENST00000502825 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
TMEM173-203ENST00000502825 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
TMEM173-203ENST00000502825 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
TMEM173-203ENST00000502825 NSD2O96028 1365 aa16.15■□□□□ 0.18
TMEM173-203ENST00000502825 LY75O60449 1722 aa16.15■□□□□ 0.18
TMEM173-203ENST00000502825 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
TMEM173-203ENST00000502825 MEGF6O75095 1541 aa16.14■□□□□ 0.18
TMEM173-203ENST00000502825 PCDH11XQ9BZA7 1347 aa16.14■□□□□ 0.17
TMEM173-203ENST00000502825 PCDH11YQ9BZA8 1340 aa16.14■□□□□ 0.17
TMEM173-203ENST00000502825 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
TMEM173-203ENST00000502825 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
TMEM173-203ENST00000502825 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
TMEM173-203ENST00000502825 CYP27B1O15528 508 aa16.11■□□□□ 0.17
TMEM173-203ENST00000502825 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
TMEM173-203ENST00000502825 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
TMEM173-203ENST00000502825 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
TMEM173-203ENST00000502825 MTHFSP49914 203 aa16.1■□□□□ 0.17
TMEM173-203ENST00000502825 GPR162Q16538 588 aa16.1■□□□□ 0.17
TMEM173-203ENST00000502825 POLD1P28340 1107 aa16.09■□□□□ 0.17
TMEM173-203ENST00000502825 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
TMEM173-203ENST00000502825 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
TMEM173-203ENST00000502825 SULT6B1Q6IMI4 303 aa16.08■□□□□ 0.16
TMEM173-203ENST00000502825 NLGN2Q8NFZ4 835 aa16.08■□□□□ 0.16
TMEM173-203ENST00000502825 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
TMEM173-203ENST00000502825 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
TMEM173-203ENST00000502825 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
TMEM173-203ENST00000502825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.16
TMEM173-203ENST00000502825 MSH5O43196 834 aa16.06■□□□□ 0.16
TMEM173-203ENST00000502825 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
TMEM173-203ENST00000502825 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
TMEM173-203ENST00000502825 PHKG2P15735 406 aa16.05■□□□□ 0.16
TMEM173-203ENST00000502825 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
TMEM173-203ENST00000502825 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
TMEM173-203ENST00000502825 IL13P35225 146 aa16.04■□□□□ 0.16
TMEM173-203ENST00000502825 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
TMEM173-203ENST00000502825 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
TMEM173-203ENST00000502825 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
TMEM173-203ENST00000502825 PIGBQ92521 554 aa16.04■□□□□ 0.16
TMEM173-203ENST00000502825 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
TMEM173-203ENST00000502825 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
TMEM173-203ENST00000502825 HMOX1P09601 288 aa16.03■□□□□ 0.16
TMEM173-203ENST00000502825 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
TMEM173-203ENST00000502825 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
TMEM173-203ENST00000502825 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
TMEM173-203ENST00000502825 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
TMEM173-203ENST00000502825 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
TMEM173-203ENST00000502825 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
TMEM173-203ENST00000502825 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
TMEM173-203ENST00000502825 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
TMEM173-203ENST00000502825 C5P01031 1676 aa16.01■□□□□ 0.15
TMEM173-203ENST00000502825 ITGB4P16144 1822 aa16.01■□□□□ 0.15
TMEM173-203ENST00000502825 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
TMEM173-203ENST00000502825 CABP4P57796 275 aa16■□□□□ 0.15
TMEM173-203ENST00000502825 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
TMEM173-203ENST00000502825 PALLDQ8WX93 1383 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms