RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 NCBP3Q53F19 620 aaKnown RBP9.52□□□□□ -0.89
CPNE4-202ENST00000502818 PNNQ9H307 717 aaKnown RBP9.52□□□□□ -0.89
CPNE4-202ENST00000502818 SOS2Q07890 1332 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-202ENST00000502818 LTBP4Q8N2S1 1624 aa9.51□□□□□ -0.89
CPNE4-202ENST00000502818 PRKCSHP14314 528 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-202ENST00000502818 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
CPNE4-202ENST00000502818 RTL1A6NKG5 1358 aa9.51□□□□□ -0.89
CPNE4-202ENST00000502818 RARSP54136 660 aaKnown RBP9.5□□□□□ -0.89
CPNE4-202ENST00000502818 TSPYL6Q8N831 410 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 CRBNQ96SW2 442 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
CPNE4-202ENST00000502818 RGPD2P0DJD1 1756 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 DLG5Q8TDM6 1919 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 KIF24Q5T7B8 1368 aa9.5□□□□□ -0.89
CPNE4-202ENST00000502818 NEFMP07197 916 aa9.49□□□□□ -0.89
CPNE4-202ENST00000502818 ZNF853P0CG23 659 aa9.49□□□□□ -0.89
CPNE4-202ENST00000502818 MYH16Q9H6N6 1097 aa9.49□□□□□ -0.89
CPNE4-202ENST00000502818 MBIPQ9NS73 344 aa9.49□□□□□ -0.89
CPNE4-202ENST00000502818 KIAA0232Q92628 1395 aa9.49□□□□□ -0.89
CPNE4-202ENST00000502818 ELL2O00472 640 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-202ENST00000502818 RGPD5Q99666 1765 aa9.48□□□□□ -0.89
CPNE4-202ENST00000502818 IL16Q14005 1332 aa9.48□□□□□ -0.89
CPNE4-202ENST00000502818 TCERG1O14776 1098 aaKnown RBP9.48□□□□□ -0.89
CPNE4-202ENST00000502818 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
CPNE4-202ENST00000502818 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
CPNE4-202ENST00000502818 C8orf58Q8NAV2 365 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 CRYBG1Q9Y4K1 1723 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 CRB1P82279 1406 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 ERBB3P21860 1342 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 PANK1Q8TE04 598 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 SSH1Q8WYL5 1049 aa9.47□□□□□ -0.89
CPNE4-202ENST00000502818 FRAT1Q92837 279 aaPredicted RBP9.47□□□□□ -0.89
CPNE4-202ENST00000502818 RLBP1P12271 317 aa9.46□□□□□ -0.89
CPNE4-202ENST00000502818 IFT57Q9NWB7 429 aa9.46□□□□□ -0.89
CPNE4-202ENST00000502818 COL18A1P39060 1754 aa9.46□□□□□ -0.9
CPNE4-202ENST00000502818 CFAP44Q96MT7 982 aa9.46□□□□□ -0.9
CPNE4-202ENST00000502818 LGR6Q9HBX8 967 aa9.46□□□□□ -0.9
CPNE4-202ENST00000502818 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.9
CPNE4-202ENST00000502818 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
CPNE4-202ENST00000502818 CHL1O00533 1208 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 VAMP4O75379 141 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 ERICH6BQ5W0A0 696 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 ROBO1Q9Y6N7 1651 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 GNAI1P63096 354 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 NCAPD2Q15021 1401 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 CAMTA1Q9Y6Y1 1673 aa9.44□□□□□ -0.9
CPNE4-202ENST00000502818 GNAT3A8MTJ3 354 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 CSB-PGBD3P0DP91 1061 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 SKAP1Q86WV1 359 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 PRDM11Q9NQV5 511 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 SMC4Q9NTJ3 1288 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 CPDO75976 1380 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 MPRIPQ6WCQ1 1025 aa9.43□□□□□ -0.9
CPNE4-202ENST00000502818 NOB1Q9ULX3 412 aaKnown RBP9.43□□□□□ -0.9
CPNE4-202ENST00000502818 MAP3K5Q99683 1374 aa9.42□□□□□ -0.9
CPNE4-202ENST00000502818 MEGF6O75095 1541 aa9.42□□□□□ -0.9
CPNE4-202ENST00000502818 KCNQ3O43525 872 aa9.42□□□□□ -0.9
CPNE4-202ENST00000502818 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
CPNE4-202ENST00000502818 ZNF530Q6P9A1 599 aaPredicted RBP9.42□□□□□ -0.9
CPNE4-202ENST00000502818 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
CPNE4-202ENST00000502818 TWISTNBQ3B726 338 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-202ENST00000502818 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
CPNE4-202ENST00000502818 LMO7Q8WWI1 1683 aa9.41□□□□□ -0.9
CPNE4-202ENST00000502818 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
CPNE4-202ENST00000502818 TRIM27P14373 513 aa9.41□□□□□ -0.9
CPNE4-202ENST00000502818 CANXP27824 592 aaKnown RBP9.41□□□□□ -0.9
CPNE4-202ENST00000502818 CALD1Q05682 793 aaKnown RBP9.41□□□□□ -0.9
CPNE4-202ENST00000502818 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
CPNE4-202ENST00000502818 STRN4Q9NRL3 753 aa9.41□□□□□ -0.9
CPNE4-202ENST00000502818 TSPYL4Q9UJ04 414 aa9.41□□□□□ -0.9
CPNE4-202ENST00000502818 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
CPNE4-202ENST00000502818 MRPL50Q8N5N7 158 aaKnown RBP9.4□□□□□ -0.9
CPNE4-202ENST00000502818 PLEKHO1Q53GL0 409 aaPredicted RBP9.4□□□□□ -0.91
CPNE4-202ENST00000502818 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.4□□□□□ -0.91
CPNE4-202ENST00000502818 CEMIPQ8WUJ3 1361 aa9.39□□□□□ -0.91
CPNE4-202ENST00000502818 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
CPNE4-202ENST00000502818 CT47B1P0C2W7 299 aaPredicted RBP9.39□□□□□ -0.91
CPNE4-202ENST00000502818 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
CPNE4-202ENST00000502818 NECTIN2Q92692 538 aa9.39□□□□□ -0.91
CPNE4-202ENST00000502818 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
CPNE4-202ENST00000502818 HTATSF1O43719 755 aaKnown RBP9.38□□□□□ -0.91
CPNE4-202ENST00000502818 AKAP4Q5JQC9 854 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 TOM1L2Q6ZVM7 507 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 LRRC37A3O60309 1634 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 UBAP1LF5GYI3 381 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 CYP27B1O15528 508 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 PDE3AQ14432 1141 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 BTG4Q9NY30 223 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms