RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 STAU1O95793 577 aaKnown RBP5.26□□□□□ -1.57
SMAD1-203ENST00000502342 SKIP12755 728 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 CCDC125Q86Z20 511 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 OSBPL3Q9H4L5 887 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 ZNF777Q9ULD5 760 aaPredicted RBP5.26□□□□□ -1.57
SMAD1-203ENST00000502342 DOLKQ9UPQ8 538 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 A0A1W2PRU2 124 aa5.25□□□□□ -1.57
SMAD1-203ENST00000502342 ERVK-9P63128 1117 aa5.25□□□□□ -1.57
SMAD1-203ENST00000502342 PROSER2Q86WR7 435 aaPredicted RBP5.25□□□□□ -1.57
SMAD1-203ENST00000502342 FNBP4Q8N3X1 1017 aaPredicted RBP5.25□□□□□ -1.57
SMAD1-203ENST00000502342 ADAMTS19Q8TE59 1207 aa5.25□□□□□ -1.57
SMAD1-203ENST00000502342 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
SMAD1-203ENST00000502342 DNMT3LQ9UJW3 386 aa5.25□□□□□ -1.57
SMAD1-203ENST00000502342 MYCP01106 439 aaPredicted RBP5.24□□□□□ -1.57
SMAD1-203ENST00000502342 SOX11P35716 441 aa5.24□□□□□ -1.57
SMAD1-203ENST00000502342 USP4Q13107 963 aa5.24□□□□□ -1.57
SMAD1-203ENST00000502342 PRICKLE2Q7Z3G6 844 aa5.24□□□□□ -1.57
SMAD1-203ENST00000502342 DEPDC4Q8N2C3 294 aa5.24□□□□□ -1.57
SMAD1-203ENST00000502342 PLPP7Q8NBV4 271 aa5.24□□□□□ -1.57
SMAD1-203ENST00000502342 A6NJR5 290 aa5.23□□□□□ -1.57
SMAD1-203ENST00000502342 TERTO14746 1132 aaKnown RBP5.23□□□□□ -1.57
SMAD1-203ENST00000502342 TRAK2O60296 914 aa5.23□□□□□ -1.57
SMAD1-203ENST00000502342 RHOQP17081 205 aa5.23□□□□□ -1.57
SMAD1-203ENST00000502342 NLRP3Q96P20 1036 aa5.23□□□□□ -1.57
SMAD1-203ENST00000502342 ARHGEF10LQ9HCE6 1279 aa5.23□□□□□ -1.57
SMAD1-203ENST00000502342 FOXD4L5Q5VV16 416 aaPredicted RBP5.22□□□□□ -1.57
SMAD1-203ENST00000502342 TBC1D9Q6ZT07 1266 aa5.22□□□□□ -1.57
SMAD1-203ENST00000502342 NXF1Q9UBU9 619 aaKnown RBP5.22□□□□□ -1.57
SMAD1-203ENST00000502342 PTSQ03393 145 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 POU4F2Q12837 409 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.21□□□□□ -1.58
SMAD1-203ENST00000502342 MAP7D1Q3KQU3 841 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 SLC27A3Q5K4L6 730 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 TREML4Q6UXN2 200 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 CYP2U1Q7Z449 544 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 RNF217Q8TC41 542 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 GLMNQ92990 594 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 CALR3Q96L12 384 aaKnown RBP5.21□□□□□ -1.58
SMAD1-203ENST00000502342 ZMYND15Q9H091 742 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 TFIP11Q9UBB9 837 aaKnown RBP5.21□□□□□ -1.58
SMAD1-203ENST00000502342 CHIC2Q9UKJ5 165 aa5.21□□□□□ -1.58
SMAD1-203ENST00000502342 PPFIA3O75145 1194 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 WFS1O76024 890 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 GNRH1P01148 92 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 IL2RAP01589 272 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 CENPCQ03188 943 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 NCOA4Q13772 614 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 LYSMD3Q7Z3D4 306 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 CNKSR1Q969H4 720 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 SIRT1Q96EB6 747 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 SERTAD1Q9UHV2 236 aa5.2□□□□□ -1.58
SMAD1-203ENST00000502342 PHKA2P46019 1235 aa5.19□□□□□ -1.58
SMAD1-203ENST00000502342 RNF144AP50876 292 aaPredicted RBP5.19□□□□□ -1.58
SMAD1-203ENST00000502342 NFX1Q12986 1120 aaKnown RBP5.19□□□□□ -1.58
SMAD1-203ENST00000502342 EML3Q32P44 896 aa5.19□□□□□ -1.58
SMAD1-203ENST00000502342 SLC16A10Q8TF71 515 aa5.19□□□□□ -1.58
SMAD1-203ENST00000502342 XAGE2Q96GT9 111 aa5.19□□□□□ -1.58
SMAD1-203ENST00000502342 UCN2Q96RP3 112 aa5.19□□□□□ -1.58
SMAD1-203ENST00000502342 ETNK1Q9HBU6 452 aa5.19□□□□□ -1.58
SMAD1-203ENST00000502342 USP17L5A8MUK1 530 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 CLN3Q13286 438 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 CDCA8Q53HL2 280 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 CCDC155Q8N6L0 562 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 ESYT1Q9BSJ8 1104 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 GRIP2Q9C0E4 1043 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 NOD1Q9Y239 953 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 PCDHGA11Q9Y5H2 935 aa5.18□□□□□ -1.58
SMAD1-203ENST00000502342 ZBTB7BO15156 539 aaPredicted RBP5.17□□□□□ -1.58
SMAD1-203ENST00000502342 ATP9BO43861 1147 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 RFX1P22670 979 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 GDF10P55107 478 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 GTF2IP78347 998 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 PSME1Q06323 249 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 ESCO1Q5FWF5 840 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 VWA5B2Q8N398 1253 aa5.17□□□□□ -1.58
SMAD1-203ENST00000502342 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMAD1-203ENST00000502342 ZSCAN10Q96SZ4 725 aaPredicted RBP5.17□□□□□ -1.58
SMAD1-203ENST00000502342 GAS2L1Q99501 681 aaPredicted RBP5.17□□□□□ -1.58
SMAD1-203ENST00000502342 MKRN1Q9UHC7 482 aaKnown RBP5.17□□□□□ -1.58
SMAD1-203ENST00000502342 SLC35F4A4IF30 521 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 USP17L3A6NCW0 530 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 USP17L4A6NCW7 530 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 PALM3A6NDB9 673 aaPredicted RBP5.16□□□□□ -1.58
SMAD1-203ENST00000502342 H3BM21 787 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 INHAP05111 366 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 LMOD1P29536 600 aaPredicted RBP5.16□□□□□ -1.58
SMAD1-203ENST00000502342 SCNN1DP51172 638 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 TMEM214Q6NUQ4 689 aaKnown RBP5.16□□□□□ -1.58
SMAD1-203ENST00000502342 USP17L2Q6R6M4 530 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 USP17L1Q7RTZ2 530 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 NFATC2IPQ8NCF5 419 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 PPP1R12CQ9BZL4 782 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 ERBB4Q15303 1308 aa5.16□□□□□ -1.58
SMAD1-203ENST00000502342 SENP3-EIF4A1A0A087X0R7 540 aa5.15□□□□□ -1.59
SMAD1-203ENST00000502342 CDC14CA4D256 554 aa5.15□□□□□ -1.59
SMAD1-203ENST00000502342 ARID3CA6NKF2 412 aa5.15□□□□□ -1.59
SMAD1-203ENST00000502342 TMEM229AB2RXF0 380 aa5.15□□□□□ -1.59
SMAD1-203ENST00000502342 LZTS3O60299 673 aaPredicted RBP5.15□□□□□ -1.59
SMAD1-203ENST00000502342 GPC1P35052 558 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms